FFCP PHASE1:Mm9::chr14:55525994..55526005,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=428|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:55525994..55526005,-|id=chr14:55525994..55526005,-|ontology_enrichment_celltype=CL:0000117!1.92e-11!23;CL:0000337!1.92e-11!23;CL:0000221!4.46e-11!44;CL:0000133!4.46e-11!44;CL:0002319!9.81e-11!43;CL:0000540!7.30e-10!33;CL:0000047!7.30e-10!33;CL:0000031!7.30e-10!33;CL:0000404!7.30e-10!33;CL:0000055!5.73e-08!50;CL:0000393!3.17e-07!39;CL:0000211!3.17e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-20,23;CL:0000337,6.12e-20,23;CL:0002614,1.81e-13,3;CL:0000540,2.41e-13,33;CL:0000047,2.41e-13,33;CL:0000031,2.41e-13,33;CL:0000404,2.41e-13,33;CL:0002610,3.22e-12,3;CL:0002319,6.61e-12,43;CL:0000221,1.37e-11,44;CL:0000133,1.37e-11,44;CL:0000393,5.23e-11,39;CL:0000211,5.23e-11,39;CL:0002611,2.44e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.25e-29!75;UBERON:0001016!6.25e-29!75;UBERON:0001017!2.88e-28!73;UBERON:0005743!2.88e-28!73;UBERON:0001049!1.81e-24!52;UBERON:0005068!1.81e-24!52;UBERON:0006241!1.81e-24!52;UBERON:0007135!1.81e-24!52;UBERON:0000955!1.14e-22!50;UBERON:0006238!1.14e-22!50;UBERON:0002616!1.14e-21!49;UBERON:0004121!1.27e-20!102;UBERON:0000924!1.27e-20!102;UBERON:0006601!1.27e-20!102;UBERON:0000033!8.41e-20!63;UBERON:0002346!4.95e-18!71;UBERON:0003075!4.95e-18!71;UBERON:0007284!4.95e-18!71;UBERON:0002020!1.14e-17!34;UBERON:0003080!1.82e-17!40;UBERON:0002780!1.30e-16!39;UBERON:0001890!1.30e-16!39;UBERON:0006240!1.30e-16!39;UBERON:0003056!7.71e-15!49;UBERON:0002791!3.99e-13!29;UBERON:0003528!3.99e-13!29;UBERON:0001893!3.99e-13!29;UBERON:0007811!1.83e-10!86;UBERON:0000153!2.04e-10!94;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21;UBERON:0002021!6.68e-08!10;UBERON:0000411!6.68e-08!10;UBERON:0001950!6.68e-08!10;UBERON:0003076!1.24e-07!12;UBERON:0003057!1.24e-07!12;UBERON:0002619!2.46e-07!17;UBERON:0002298!4.06e-07!6;UBERON:0002240!5.01e-07!6;UBERON:0005174!5.01e-07!6;UBERON:0001137!5.01e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.30e-24,54;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0002020,3.60e-21,34;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0001049,2.37e-17,52;UBERON:0005068,2.37e-17,52;UBERON:0006241,2.37e-17,52;UBERON:0007135,2.37e-17,52;UBERON:0002950,7.45e-17,4;UBERON:0001891,7.45e-17,4;UBERON:0009616,7.45e-17,4;UBERON:0010286,7.45e-17,4;UBERON:0001948,1.19e-13,5;UBERON:0002315,1.19e-13,5;UBERON:0002346,1.41e-13,64;UBERON:0003075,1.41e-13,64;UBERON:0007284,1.41e-13,64;UBERON:0002038,1.81e-13,3;UBERON:0009663,1.81e-13,3;UBERON:0009661,1.81e-13,3;UBERON:0000125,1.81e-13,3;UBERON:0002308,1.81e-13,3;UBERON:0003080,1.58e-12,40;UBERON:0003528,2.07e-12,29;UBERON:0002791,2.07e-12,29;UBERON:0001893,2.07e-12,29;UBERON:0000955,2.24e-12,47;UBERON:0006238,2.24e-12,47;UBERON:0004684,3.22e-12,3;UBERON:0002275,3.22e-12,3;UBERON:0010371,1.48e-11,73;UBERON:0002240,2.13e-11,6;UBERON:0005174,2.13e-11,6;UBERON:0001137,2.13e-11,6;UBERON:0002780,8.15e-11,39;UBERON:0001890,8.15e-11,39;UBERON:0006240,8.15e-11,39;UBERON:0002616,1.26e-10,46;UBERON:0003056,7.49e-10,49;UBERON:0002256,2.44e-09,2;UBERON:0010314,1.39e-08,92;UBERON:0002420,1.62e-08,8;UBERON:0007245,1.62e-08,8;UBERON:0010009,1.62e-08,8;UBERON:0010011,1.62e-08,8;UBERON:0000454,1.62e-08,8;UBERON:0011216,6.78e-07,194|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,0,0,0,0,0,0,0.599200221036809,4.61061966385865,0.311068836925433,0.810035629990144,0,3.42781181284564,1.76694832761291,0,0.0958454710182364,0,1.10115880999389,1.78762273319263,1.53606533256243,0.263772575460388,0.914876436024097,0,4.18774498502071,1.68828783009504,3.51435969886663,1.76777151284201,2.70506193518296,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,1.3481157546434,1.37250180845588,0.125654352112864,1.21677024134594,0.511430914660661,2.0778804455956,0.324482526135515,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.89260953707715,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0,2.57057053137446,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0.532020700926821,0.713475270408282,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.506868376472335,0,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,0,0.755393897389701,2.02506750069542,1.80128481289688,0.906284817968409,1.55328093525546,0.207574695168353,0,0,0,0,0,0.44449345560323,0,0,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.436039249896986,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0.661774257358546,0|short_description=p@chr14:55525994..55526005,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=428 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:55525994..55526005,- | |||
|id=chr14:55525994..55526005,- | |||
|ontology_enrichment_celltype=CL:0000117!1.92e-11!23;CL:0000337!1.92e-11!23;CL:0000221!4.46e-11!44;CL:0000133!4.46e-11!44;CL:0002319!9.81e-11!43;CL:0000540!7.30e-10!33;CL:0000047!7.30e-10!33;CL:0000031!7.30e-10!33;CL:0000404!7.30e-10!33;CL:0000055!5.73e-08!50;CL:0000393!3.17e-07!39;CL:0000211!3.17e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-20,23;CL:0000337,6.12e-20,23;CL:0002614,1.81e-13,3;CL:0000540,2.41e-13,33;CL:0000047,2.41e-13,33;CL:0000031,2.41e-13,33;CL:0000404,2.41e-13,33;CL:0002610,3.22e-12,3;CL:0002319,6.61e-12,43;CL:0000221,1.37e-11,44;CL:0000133,1.37e-11,44;CL:0000393,5.23e-11,39;CL:0000211,5.23e-11,39;CL:0002611,2.44e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.25e-29!75;UBERON:0001016!6.25e-29!75;UBERON:0001017!2.88e-28!73;UBERON:0005743!2.88e-28!73;UBERON:0001049!1.81e-24!52;UBERON:0005068!1.81e-24!52;UBERON:0006241!1.81e-24!52;UBERON:0007135!1.81e-24!52;UBERON:0000955!1.14e-22!50;UBERON:0006238!1.14e-22!50;UBERON:0002616!1.14e-21!49;UBERON:0004121!1.27e-20!102;UBERON:0000924!1.27e-20!102;UBERON:0006601!1.27e-20!102;UBERON:0000033!8.41e-20!63;UBERON:0002346!4.95e-18!71;UBERON:0003075!4.95e-18!71;UBERON:0007284!4.95e-18!71;UBERON:0002020!1.14e-17!34;UBERON:0003080!1.82e-17!40;UBERON:0002780!1.30e-16!39;UBERON:0001890!1.30e-16!39;UBERON:0006240!1.30e-16!39;UBERON:0003056!7.71e-15!49;UBERON:0002791!3.99e-13!29;UBERON:0003528!3.99e-13!29;UBERON:0001893!3.99e-13!29;UBERON:0007811!1.83e-10!86;UBERON:0000153!2.04e-10!94;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21;UBERON:0002021!6.68e-08!10;UBERON:0000411!6.68e-08!10;UBERON:0001950!6.68e-08!10;UBERON:0003076!1.24e-07!12;UBERON:0003057!1.24e-07!12;UBERON:0002619!2.46e-07!17;UBERON:0002298!4.06e-07!6;UBERON:0002240!5.01e-07!6;UBERON:0005174!5.01e-07!6;UBERON:0001137!5.01e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.30e-24,54;UBERON:0001017,5.80e-24,73;UBERON:0001016,3.07e-23,75;UBERON:0002020,3.60e-21,34;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0001049,2.37e-17,52;UBERON:0005068,2.37e-17,52;UBERON:0006241,2.37e-17,52;UBERON:0007135,2.37e-17,52;UBERON:0002950,7.45e-17,4;UBERON:0001891,7.45e-17,4;UBERON:0009616,7.45e-17,4;UBERON:0010286,7.45e-17,4;UBERON:0001948,1.19e-13,5;UBERON:0002315,1.19e-13,5;UBERON:0002346,1.41e-13,64;UBERON:0003075,1.41e-13,64;UBERON:0007284,1.41e-13,64;UBERON:0002038,1.81e-13,3;UBERON:0009663,1.81e-13,3;UBERON:0009661,1.81e-13,3;UBERON:0000125,1.81e-13,3;UBERON:0002308,1.81e-13,3;UBERON:0003080,1.58e-12,40;UBERON:0003528,2.07e-12,29;UBERON:0002791,2.07e-12,29;UBERON:0001893,2.07e-12,29;UBERON:0000955,2.24e-12,47;UBERON:0006238,2.24e-12,47;UBERON:0004684,3.22e-12,3;UBERON:0002275,3.22e-12,3;UBERON:0010371,1.48e-11,73;UBERON:0002240,2.13e-11,6;UBERON:0005174,2.13e-11,6;UBERON:0001137,2.13e-11,6;UBERON:0002780,8.15e-11,39;UBERON:0001890,8.15e-11,39;UBERON:0006240,8.15e-11,39;UBERON:0002616,1.26e-10,46;UBERON:0003056,7.49e-10,49;UBERON:0002256,2.44e-09,2;UBERON:0010314,1.39e-08,92;UBERON:0002420,1.62e-08,8;UBERON:0007245,1.62e-08,8;UBERON:0010009,1.62e-08,8;UBERON:0010011,1.62e-08,8;UBERON:0000454,1.62e-08,8;UBERON:0011216,6.78e-07,194 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,2.11596391708813,0,0,0,0,0,0,0.599200221036809,4.61061966385865,0.311068836925433,0.810035629990144,0,3.42781181284564,1.76694832761291,0,0.0958454710182364,0,1.10115880999389,1.78762273319263,1.53606533256243,0.263772575460388,0.914876436024097,0,4.18774498502071,1.68828783009504,3.51435969886663,1.76777151284201,2.70506193518296,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,1.3481157546434,1.37250180845588,0.125654352112864,1.21677024134594,0.511430914660661,2.0778804455956,0.324482526135515,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.89260953707715,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0,0,0,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0,2.57057053137446,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0.532020700926821,0.713475270408282,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.506868376472335,0,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.3748254587495,0,0.755393897389701,2.02506750069542,1.80128481289688,0.906284817968409,1.55328093525546,0.207574695168353,0,0,0,0,0,0.44449345560323,0,0,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.436039249896986,0.282328141245992,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0.661774257358546,0 | |||
|short_description=p@chr14:55525994..55526005,- | |||
}} |
Revision as of 02:26, 13 September 2013
Short description: | p@chr14:55525994..55526005, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:55525994..55526005, - |
Coexpression cluster: | MCL_coexpression_mm9:428 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.12e-20 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-20 | 23 |
neuron of the substantia nigra | 1.81e-13 | 3 |
neuron | 2.41e-13 | 33 |
neuronal stem cell | 2.41e-13 | 33 |
neuroblast | 2.41e-13 | 33 |
electrically signaling cell | 2.41e-13 | 33 |
raphe nuclei neuron | 3.22e-12 | 3 |
neural cell | 6.61e-12 | 43 |
ectodermal cell | 1.37e-11 | 44 |
neurectodermal cell | 1.37e-11 | 44 |
electrically responsive cell | 5.23e-11 | 39 |
electrically active cell | 5.23e-11 | 39 |
neuron of the dorsal spinal cord | 2.44e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.