FFCP PHASE1:Mm9::chr15:99501005..99501065,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11419|HGNC=|MCL_coexpression_id=13|UniProt=Q6NXK8|association_with_transcript=-83bp_to_ENSMUST00000023758,NM_009597,uc007xqa.1_5end|description=CAGE_peak_2_at_Accn2_5end|id=chr15:99501005..99501065,+|ontology_enrichment_celltype=CL:0000540!7.87e-18!33;CL:0000047!7.87e-18!33;CL:0000031!7.87e-18!33;CL:0000404!7.87e-18!33;CL:0000117!1.13e-15!23;CL:0000337!1.13e-15!23;CL:0000221!5.77e-14!44;CL:0000133!5.77e-14!44;CL:0000393!1.21e-13!39;CL:0000211!1.21e-13!39;CL:0002319!1.33e-13!43;CL:0000055!3.65e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,7.62e-22,33;CL:0000047,7.62e-22,33;CL:0000031,7.62e-22,33;CL:0000404,7.62e-22,33;CL:0000117,5.65e-20,23;CL:0000337,5.65e-20,23;CL:0000393,2.18e-16,39;CL:0000211,2.18e-16,39;CL:0000221,3.42e-16,44;CL:0000133,3.42e-16,44;CL:0002319,9.99e-16,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.45e-31!73;UBERON:0005743!4.45e-31!73;UBERON:0000073!2.74e-30!75;UBERON:0001016!2.74e-30!75;UBERON:0001049!5.24e-24!52;UBERON:0005068!5.24e-24!52;UBERON:0006241!5.24e-24!52;UBERON:0007135!5.24e-24!52;UBERON:0002346!5.38e-24!71;UBERON:0003075!5.38e-24!71;UBERON:0007284!5.38e-24!71;UBERON:0004121!1.22e-23!102;UBERON:0000924!1.22e-23!102;UBERON:0006601!1.22e-23!102;UBERON:0000955!3.21e-22!50;UBERON:0006238!3.21e-22!50;UBERON:0002616!1.56e-21!49;UBERON:0000033!3.23e-21!63;UBERON:0002020!2.69e-18!34;UBERON:0003080!5.25e-18!40;UBERON:0003056!6.29e-18!49;UBERON:0002780!2.84e-17!39;UBERON:0001890!2.84e-17!39;UBERON:0006240!2.84e-17!39;UBERON:0002791!1.23e-14!29;UBERON:0003528!1.23e-14!29;UBERON:0001893!1.23e-14!29;UBERON:0007811!1.73e-11!86;UBERON:0000153!6.79e-11!94;UBERON:0000956!1.05e-09!21;UBERON:0001869!1.05e-09!21;UBERON:0000203!1.05e-09!21;UBERON:0002619!1.08e-07!17;UBERON:0000468!8.66e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.37e-36,73;UBERON:0001016,1.14e-34,75;UBERON:0000073,5.85e-29,54;UBERON:0004121,2.09e-27,95;UBERON:0000924,2.09e-27,95;UBERON:0006601,2.09e-27,95;UBERON:0001049,3.31e-27,52;UBERON:0005068,3.31e-27,52;UBERON:0006241,3.31e-27,52;UBERON:0007135,3.31e-27,52;UBERON:0002346,1.94e-26,64;UBERON:0003075,1.94e-26,64;UBERON:0007284,1.94e-26,64;UBERON:0010371,1.07e-22,73;UBERON:0002020,1.07e-22,34;UBERON:0000955,2.03e-22,47;UBERON:0006238,2.03e-22,47;UBERON:0002616,1.41e-21,46;UBERON:0003080,6.42e-20,40;UBERON:0002780,5.32e-19,39;UBERON:0001890,5.32e-19,39;UBERON:0006240,5.32e-19,39;UBERON:0003056,4.02e-18,49;UBERON:0003528,5.96e-18,29;UBERON:0002791,5.96e-18,29;UBERON:0001893,5.96e-18,29;UBERON:0010314,4.53e-17,92;UBERON:0000956,1.43e-11,21;UBERON:0001869,1.43e-11,21;UBERON:0000203,1.43e-11,21;UBERON:0002619,5.61e-09,17;UBERON:0002420,8.27e-08,8;UBERON:0007245,8.27e-08,8;UBERON:0010009,8.27e-08,8;UBERON:0010011,8.27e-08,8;UBERON:0000454,8.27e-08,8;UBERON:0003076,9.07e-08,12;UBERON:0003057,9.07e-08,12;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10;UBERON:0002240,6.37e-07,6;UBERON:0005174,6.37e-07,6;UBERON:0001137,6.37e-07,6|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.8064285749853,0,0,0,0,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,27.5150386769053,18.5146842745212,24.719424736741,0.338844532069132,0,0,0,0,1.49800055259202,3.84218305321555,6.84351441235953,10.8004750665353,8.83364837675805,23.9946826899195,20.5407743085001,9.0643191419066,9.29701068876893,14.7075005857603,19.82085857989,15.0671058940522,13.0565553267807,15.2988093767025,16.5592634920361,18.7528813400434,14.7966989470732,9.56696437053856,10.2374826010463,20.3293723976831,18.9354335462807,24.791126294765,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,2.81686839553361,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0,0.445326417194474,3.46970653532272,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0,0.144599356919912,0,0,0,0,0,17.5668478206928,17.3840766655168,0,0,0,0,21.12048015608,18.7575247155637,18.5968441127039,9.90798625095976,13.0414883238469,14.3373750746096,15.5751612545047,1.62942982160506,0.124406970610093,0,0.210441855886474,0.520481771850815,0.459804208866946,0.540186389416048,1.65775299619287,1.36072998302656,1.40925092313335,1.3118241438362,2.32833033665114,0,0.756424320671277,0.527853372491847,1.53437012699302,0.834141747676794,0.696504333044333,0.205782136407943,4.17971960318836,0,0,0,1.44988040774851,1.40715635988658,1.08037236876609,0.23674473558521,0.196764231747404,1.07986979021165,0.232533944750408,0.268273401399619,0.467061369468678,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,5.25724871410318,11.0107935245834,0,0.264450566663544,1.06644125267617,1.16118335930219,0.515469845288373,1.00841762311671,1.11189021922435,0.190225626112559,0,0.3293979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| ||
|EntrezGene=11419 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q6NXK8 | |||
|association_with_transcript=-83bp_to_ENSMUST00000023758,NM_009597,uc007xqa.1_5end | |||
|description=CAGE_peak_2_at_Accn2_5end | |||
|id=chr15:99501005..99501065,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.87e-18!33;CL:0000047!7.87e-18!33;CL:0000031!7.87e-18!33;CL:0000404!7.87e-18!33;CL:0000117!1.13e-15!23;CL:0000337!1.13e-15!23;CL:0000221!5.77e-14!44;CL:0000133!5.77e-14!44;CL:0000393!1.21e-13!39;CL:0000211!1.21e-13!39;CL:0002319!1.33e-13!43;CL:0000055!3.65e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.62e-22,33;CL:0000047,7.62e-22,33;CL:0000031,7.62e-22,33;CL:0000404,7.62e-22,33;CL:0000117,5.65e-20,23;CL:0000337,5.65e-20,23;CL:0000393,2.18e-16,39;CL:0000211,2.18e-16,39;CL:0000221,3.42e-16,44;CL:0000133,3.42e-16,44;CL:0002319,9.99e-16,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.45e-31!73;UBERON:0005743!4.45e-31!73;UBERON:0000073!2.74e-30!75;UBERON:0001016!2.74e-30!75;UBERON:0001049!5.24e-24!52;UBERON:0005068!5.24e-24!52;UBERON:0006241!5.24e-24!52;UBERON:0007135!5.24e-24!52;UBERON:0002346!5.38e-24!71;UBERON:0003075!5.38e-24!71;UBERON:0007284!5.38e-24!71;UBERON:0004121!1.22e-23!102;UBERON:0000924!1.22e-23!102;UBERON:0006601!1.22e-23!102;UBERON:0000955!3.21e-22!50;UBERON:0006238!3.21e-22!50;UBERON:0002616!1.56e-21!49;UBERON:0000033!3.23e-21!63;UBERON:0002020!2.69e-18!34;UBERON:0003080!5.25e-18!40;UBERON:0003056!6.29e-18!49;UBERON:0002780!2.84e-17!39;UBERON:0001890!2.84e-17!39;UBERON:0006240!2.84e-17!39;UBERON:0002791!1.23e-14!29;UBERON:0003528!1.23e-14!29;UBERON:0001893!1.23e-14!29;UBERON:0007811!1.73e-11!86;UBERON:0000153!6.79e-11!94;UBERON:0000956!1.05e-09!21;UBERON:0001869!1.05e-09!21;UBERON:0000203!1.05e-09!21;UBERON:0002619!1.08e-07!17;UBERON:0000468!8.66e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.37e-36,73;UBERON:0001016,1.14e-34,75;UBERON:0000073,5.85e-29,54;UBERON:0004121,2.09e-27,95;UBERON:0000924,2.09e-27,95;UBERON:0006601,2.09e-27,95;UBERON:0001049,3.31e-27,52;UBERON:0005068,3.31e-27,52;UBERON:0006241,3.31e-27,52;UBERON:0007135,3.31e-27,52;UBERON:0002346,1.94e-26,64;UBERON:0003075,1.94e-26,64;UBERON:0007284,1.94e-26,64;UBERON:0010371,1.07e-22,73;UBERON:0002020,1.07e-22,34;UBERON:0000955,2.03e-22,47;UBERON:0006238,2.03e-22,47;UBERON:0002616,1.41e-21,46;UBERON:0003080,6.42e-20,40;UBERON:0002780,5.32e-19,39;UBERON:0001890,5.32e-19,39;UBERON:0006240,5.32e-19,39;UBERON:0003056,4.02e-18,49;UBERON:0003528,5.96e-18,29;UBERON:0002791,5.96e-18,29;UBERON:0001893,5.96e-18,29;UBERON:0010314,4.53e-17,92;UBERON:0000956,1.43e-11,21;UBERON:0001869,1.43e-11,21;UBERON:0000203,1.43e-11,21;UBERON:0002619,5.61e-09,17;UBERON:0002420,8.27e-08,8;UBERON:0007245,8.27e-08,8;UBERON:0010009,8.27e-08,8;UBERON:0010011,8.27e-08,8;UBERON:0000454,8.27e-08,8;UBERON:0003076,9.07e-08,12;UBERON:0003057,9.07e-08,12;UBERON:0002021,1.35e-07,10;UBERON:0000411,1.35e-07,10;UBERON:0001950,1.35e-07,10;UBERON:0002240,6.37e-07,6;UBERON:0005174,6.37e-07,6;UBERON:0001137,6.37e-07,6 | |||
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.8064285749853,0,0,0,0,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,27.5150386769053,18.5146842745212,24.719424736741,0.338844532069132,0,0,0,0,1.49800055259202,3.84218305321555,6.84351441235953,10.8004750665353,8.83364837675805,23.9946826899195,20.5407743085001,9.0643191419066,9.29701068876893,14.7075005857603,19.82085857989,15.0671058940522,13.0565553267807,15.2988093767025,16.5592634920361,18.7528813400434,14.7966989470732,9.56696437053856,10.2374826010463,20.3293723976831,18.9354335462807,24.791126294765,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,2.81686839553361,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0,0.445326417194474,3.46970653532272,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0,0.144599356919912,0,0,0,0,0,17.5668478206928,17.3840766655168,0,0,0,0,21.12048015608,18.7575247155637,18.5968441127039,9.90798625095976,13.0414883238469,14.3373750746096,15.5751612545047,1.62942982160506,0.124406970610093,0,0.210441855886474,0.520481771850815,0.459804208866946,0.540186389416048,1.65775299619287,1.36072998302656,1.40925092313335,1.3118241438362,2.32833033665114,0,0.756424320671277,0.527853372491847,1.53437012699302,0.834141747676794,0.696504333044333,0.205782136407943,4.17971960318836,0,0,0,1.44988040774851,1.40715635988658,1.08037236876609,0.23674473558521,0.196764231747404,1.07986979021165,0.232533944750408,0.268273401399619,0.467061369468678,0.493679549740441,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,5.25724871410318,11.0107935245834,0,0.264450566663544,1.06644125267617,1.16118335930219,0.515469845288373,1.00841762311671,1.11189021922435,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,0,0,0.581857461502877,0.140271639780637,0.126473074248515,0.590440591918409,0,0,0,1.00107063429656,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,0.184753190166605,1.89491411770485,0.651859905768103,1.52770577197669,0.234690248288502,0.670025029767263,0,0,0,0,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,15.7339578188036,15.1203075703942,4.75411341592359,0,1.26203287766503,2.73307121007647,2.15423397732799,2.62865677747807,2.22798674082394,3.39691836946599,3.23848561339915,1.75353514746787,0.790575555893047,15.7447445046685,0,1.78065603667255,1.14020871547503,0,0,0.971122544619926,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0.775284879504663,0.727067458955011,1.06949213515416,0,0,0,5.10659408630682,0.720244376125241,0.646793418913773,0.857348140126369,1.59606210278046,1.60531935841864,3.45552943264454,5.17590413494819,0,0,0,0,0,0,0.119372344003136,0.164140899745061,0,16.1320012749143,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,1.73984796469624,0.609958401380546,0.540026704109006,0.836353184057875,0.436725127492355,0.809186078308924,0.578574190077352,0,0,0,0,4.33597983527538,3.14371131868485,0.583353565032143,1.42075805825504,0.337912250981556,0.117357238645754,0.5208175393758,0.838874755405687,0,0,0,2.22997736819181,2.36235201479103,1.29920822977795,1.07416017400489,1.19208812868759,0.360586348559907,0,0.100966449948148,0,0,0,0,0,0,0.443971906748129,0.538283139656854,0.503653849092235,0,0.750729901804728,0,0,0,7.34177395402186,9.20650473014354,8.59343270159095,12.3734291287455,8.90607275701835,5.2877572817279,4.05013500139084,8.10578165803597,5.43770890781046,8.28416498802912,1.03787347584177,1.99512436700516,2.90247129782028,4.132814190161,1.67690530102386,1.10306105070008,1.55572709461131,2.06035057238894,1.60459604795908,3.03236654116557,1.2673964994512,2.45214243801899,1.49826411951812,2.30490548657529,2.75690250986944,4.28664322154766,1.39061191133827,2.89363830695558,2.06042950401653,2.35518272215036,0.685738504770831,1.4198064492747,2.14592570952589,1.0174249164263,1.88218760830661,1.94613598150856,1.64635175585495,1.31534855718921,1.49384525230448,3.36685362994643,2.96587545310435,2.9551344712669,0.409231043169689,2.01417893541756,1.35034627686799,4.74640098082097,1.16965804222704,1.50409737833809,0.956441660344217,0.882365676478062,0.231867835620421 | |||
|short_description=p2@Accn2 | |||
}} |
Revision as of 11:53, 13 September 2013
Short description: | p2@Accn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Accn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -83bp_to_ENSMUST00000023758, NM_009597, uc007xqa.1_5end |
EntrezGene: | Accn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.62e-22 | 33 |
neuronal stem cell | 7.62e-22 | 33 |
neuroblast | 7.62e-22 | 33 |
electrically signaling cell | 7.62e-22 | 33 |
CNS neuron (sensu Vertebrata) | 5.65e-20 | 23 |
neuroblast (sensu Vertebrata) | 5.65e-20 | 23 |
electrically responsive cell | 2.18e-16 | 39 |
electrically active cell | 2.18e-16 | 39 |
ectodermal cell | 3.42e-16 | 44 |
neurectodermal cell | 3.42e-16 | 44 |
neural cell | 9.99e-16 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.