FFCP PHASE1:Mm9::chr16:50420236..50420246,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:50420236..50420246,-|id=chr16:50420236..50420246,-|ontology_enrichment_celltype=CL:0000117!2.74e-09!23;CL:0000337!2.74e-09!23;CL:0000055!4.27e-08!50;CL:0002614!4.67e-07!3;CL:0000393!5.84e-07!39;CL:0000211!5.84e-07!39;CL:0002319!5.90e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,6.85e-22,3;CL:0000117,1.33e-18,23;CL:0000337,1.33e-18,23;CL:0002611,1.23e-14,2;CL:0000540,9.07e-13,33;CL:0000047,9.07e-13,33;CL:0000031,9.07e-13,33;CL:0000404,9.07e-13,33;CL:0000393,1.07e-10,39;CL:0000211,1.07e-10,39;CL:0002610,2.41e-10,3;CL:0002319,1.24e-09,43;CL:0000221,2.13e-09,44;CL:0000133,2.13e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.81e-29!52;UBERON:0005068!5.81e-29!52;UBERON:0006241!5.81e-29!52;UBERON:0007135!5.81e-29!52;UBERON:0001017!2.70e-26!73;UBERON:0005743!2.70e-26!73;UBERON:0000073!2.53e-25!75;UBERON:0001016!2.53e-25!75;UBERON:0002616!2.57e-25!49;UBERON:0000955!1.22e-24!50;UBERON:0006238!1.22e-24!50;UBERON:0002020!1.53e-22!34;UBERON:0003080!1.66e-21!40;UBERON:0002346!1.68e-21!71;UBERON:0003075!1.68e-21!71;UBERON:0007284!1.68e-21!71;UBERON:0002780!4.12e-20!39;UBERON:0001890!4.12e-20!39;UBERON:0006240!4.12e-20!39;UBERON:0004121!2.56e-19!102;UBERON:0000924!2.56e-19!102;UBERON:0006601!2.56e-19!102;UBERON:0000033!3.78e-19!63;UBERON:0002791!9.49e-18!29;UBERON:0003528!9.49e-18!29;UBERON:0001893!9.49e-18!29;UBERON:0003056!1.18e-17!49;UBERON:0002021!4.05e-14!10;UBERON:0000411!4.05e-14!10;UBERON:0001950!4.05e-14!10;UBERON:0002619!9.02e-13!17;UBERON:0007811!9.18e-13!86;UBERON:0000025!7.80e-12!114;UBERON:0000956!2.26e-11!21;UBERON:0001869!2.26e-11!21;UBERON:0000203!2.26e-11!21;UBERON:0002298!3.37e-11!6;UBERON:0000153!5.66e-11!94;UBERON:0004111!1.91e-10!122;UBERON:0002950!1.14e-08!4;UBERON:0001891!1.14e-08!4;UBERON:0009616!1.14e-08!4;UBERON:0003076!7.44e-08!12;UBERON:0003057!7.44e-08!12;UBERON:0002420!7.95e-08!8;UBERON:0007245!7.95e-08!8;UBERON:0010009!7.95e-08!8;UBERON:0010011!7.95e-08!8;UBERON:0000454!7.95e-08!8;UBERON:0002240!2.85e-07!6;UBERON:0005174!2.85e-07!6;UBERON:0001137!2.85e-07!6;UBERON:0002038!4.67e-07!3;UBERON:0002308!4.67e-07!3;UBERON:0009663!4.67e-07!3;UBERON:0009661!4.67e-07!3;UBERON:0006331!4.67e-07!3;UBERON:0000125!4.67e-07!3;UBERON:0000477!5.76e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0002038,6.85e-22,3;UBERON:0009663,6.85e-22,3;UBERON:0009661,6.85e-22,3;UBERON:0000125,6.85e-22,3;UBERON:0002308,6.85e-22,3;UBERON:0002020,6.13e-19,34;UBERON:0000073,4.69e-17,54;UBERON:0002950,1.38e-16,4;UBERON:0001891,1.38e-16,4;UBERON:0009616,1.38e-16,4;UBERON:0010286,1.38e-16,4;UBERON:0002256,1.23e-14,2;UBERON:0001948,1.16e-12,5;UBERON:0002315,1.16e-12,5;UBERON:0001017,2.55e-12,73;UBERON:0001049,4.69e-12,52;UBERON:0005068,4.69e-12,52;UBERON:0006241,4.69e-12,52;UBERON:0007135,4.69e-12,52;UBERON:0001016,5.83e-12,75;UBERON:0003528,5.07e-11,29;UBERON:0002791,5.07e-11,29;UBERON:0001893,5.07e-11,29;UBERON:0002021,7.71e-11,10;UBERON:0000411,7.71e-11,10;UBERON:0001950,7.71e-11,10;UBERON:0002240,1.19e-10,6;UBERON:0005174,1.19e-10,6;UBERON:0001137,1.19e-10,6;UBERON:0004684,2.41e-10,3;UBERON:0002275,2.41e-10,3;UBERON:0002346,1.33e-09,64;UBERON:0003075,1.33e-09,64;UBERON:0007284,1.33e-09,64;UBERON:0004121,3.49e-09,95;UBERON:0000924,3.49e-09,95;UBERON:0006601,3.49e-09,95;UBERON:0002420,1.42e-08,8;UBERON:0007245,1.42e-08,8;UBERON:0010009,1.42e-08,8;UBERON:0010011,1.42e-08,8;UBERON:0000454,1.42e-08,8;UBERON:0010371,2.75e-08,73;UBERON:0002780,4.64e-08,39;UBERON:0001890,4.64e-08,39;UBERON:0006240,4.64e-08,39;UBERON:0003080,7.61e-08,40;UBERON:0002616,9.53e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0,0,0,2.57085885963423,1.98781686856452,0.122490799214954,0,0,0,4.97980618532232,4.6081959976873,0,0,0.52091337055676,12.0048689570594,4.50210088025344,5.65353516774197,0,1.28134512719193,0.186399445825301,0,0,0,0,0,0.539703191637817,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.173824320192276,0,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,1.55328093525546,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:50420236..50420246,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=313 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:50420236..50420246,- | |||
|id=chr16:50420236..50420246,- | |||
|ontology_enrichment_celltype=CL:0000117!2.74e-09!23;CL:0000337!2.74e-09!23;CL:0000055!4.27e-08!50;CL:0002614!4.67e-07!3;CL:0000393!5.84e-07!39;CL:0000211!5.84e-07!39;CL:0002319!5.90e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,6.85e-22,3;CL:0000117,1.33e-18,23;CL:0000337,1.33e-18,23;CL:0002611,1.23e-14,2;CL:0000540,9.07e-13,33;CL:0000047,9.07e-13,33;CL:0000031,9.07e-13,33;CL:0000404,9.07e-13,33;CL:0000393,1.07e-10,39;CL:0000211,1.07e-10,39;CL:0002610,2.41e-10,3;CL:0002319,1.24e-09,43;CL:0000221,2.13e-09,44;CL:0000133,2.13e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.81e-29!52;UBERON:0005068!5.81e-29!52;UBERON:0006241!5.81e-29!52;UBERON:0007135!5.81e-29!52;UBERON:0001017!2.70e-26!73;UBERON:0005743!2.70e-26!73;UBERON:0000073!2.53e-25!75;UBERON:0001016!2.53e-25!75;UBERON:0002616!2.57e-25!49;UBERON:0000955!1.22e-24!50;UBERON:0006238!1.22e-24!50;UBERON:0002020!1.53e-22!34;UBERON:0003080!1.66e-21!40;UBERON:0002346!1.68e-21!71;UBERON:0003075!1.68e-21!71;UBERON:0007284!1.68e-21!71;UBERON:0002780!4.12e-20!39;UBERON:0001890!4.12e-20!39;UBERON:0006240!4.12e-20!39;UBERON:0004121!2.56e-19!102;UBERON:0000924!2.56e-19!102;UBERON:0006601!2.56e-19!102;UBERON:0000033!3.78e-19!63;UBERON:0002791!9.49e-18!29;UBERON:0003528!9.49e-18!29;UBERON:0001893!9.49e-18!29;UBERON:0003056!1.18e-17!49;UBERON:0002021!4.05e-14!10;UBERON:0000411!4.05e-14!10;UBERON:0001950!4.05e-14!10;UBERON:0002619!9.02e-13!17;UBERON:0007811!9.18e-13!86;UBERON:0000025!7.80e-12!114;UBERON:0000956!2.26e-11!21;UBERON:0001869!2.26e-11!21;UBERON:0000203!2.26e-11!21;UBERON:0002298!3.37e-11!6;UBERON:0000153!5.66e-11!94;UBERON:0004111!1.91e-10!122;UBERON:0002950!1.14e-08!4;UBERON:0001891!1.14e-08!4;UBERON:0009616!1.14e-08!4;UBERON:0003076!7.44e-08!12;UBERON:0003057!7.44e-08!12;UBERON:0002420!7.95e-08!8;UBERON:0007245!7.95e-08!8;UBERON:0010009!7.95e-08!8;UBERON:0010011!7.95e-08!8;UBERON:0000454!7.95e-08!8;UBERON:0002240!2.85e-07!6;UBERON:0005174!2.85e-07!6;UBERON:0001137!2.85e-07!6;UBERON:0002038!4.67e-07!3;UBERON:0002308!4.67e-07!3;UBERON:0009663!4.67e-07!3;UBERON:0009661!4.67e-07!3;UBERON:0006331!4.67e-07!3;UBERON:0000125!4.67e-07!3;UBERON:0000477!5.76e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,6.85e-22,3;UBERON:0009663,6.85e-22,3;UBERON:0009661,6.85e-22,3;UBERON:0000125,6.85e-22,3;UBERON:0002308,6.85e-22,3;UBERON:0002020,6.13e-19,34;UBERON:0000073,4.69e-17,54;UBERON:0002950,1.38e-16,4;UBERON:0001891,1.38e-16,4;UBERON:0009616,1.38e-16,4;UBERON:0010286,1.38e-16,4;UBERON:0002256,1.23e-14,2;UBERON:0001948,1.16e-12,5;UBERON:0002315,1.16e-12,5;UBERON:0001017,2.55e-12,73;UBERON:0001049,4.69e-12,52;UBERON:0005068,4.69e-12,52;UBERON:0006241,4.69e-12,52;UBERON:0007135,4.69e-12,52;UBERON:0001016,5.83e-12,75;UBERON:0003528,5.07e-11,29;UBERON:0002791,5.07e-11,29;UBERON:0001893,5.07e-11,29;UBERON:0002021,7.71e-11,10;UBERON:0000411,7.71e-11,10;UBERON:0001950,7.71e-11,10;UBERON:0002240,1.19e-10,6;UBERON:0005174,1.19e-10,6;UBERON:0001137,1.19e-10,6;UBERON:0004684,2.41e-10,3;UBERON:0002275,2.41e-10,3;UBERON:0002346,1.33e-09,64;UBERON:0003075,1.33e-09,64;UBERON:0007284,1.33e-09,64;UBERON:0004121,3.49e-09,95;UBERON:0000924,3.49e-09,95;UBERON:0006601,3.49e-09,95;UBERON:0002420,1.42e-08,8;UBERON:0007245,1.42e-08,8;UBERON:0010009,1.42e-08,8;UBERON:0010011,1.42e-08,8;UBERON:0000454,1.42e-08,8;UBERON:0010371,2.75e-08,73;UBERON:0002780,4.64e-08,39;UBERON:0001890,4.64e-08,39;UBERON:0006240,4.64e-08,39;UBERON:0003080,7.61e-08,40;UBERON:0002616,9.53e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,0,0,0,2.57085885963423,1.98781686856452,0.122490799214954,0,0,0,4.97980618532232,4.6081959976873,0,0,0.52091337055676,12.0048689570594,4.50210088025344,5.65353516774197,0,1.28134512719193,0.186399445825301,0,0,0,0,0,0.539703191637817,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.173824320192276,0,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69107881605257,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,1.55328093525546,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:50420236..50420246,- | |||
}} |
Revision as of 12:52, 13 September 2013
Short description: | p@chr16:50420236..50420246, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:50420236..50420246, - |
Coexpression cluster: | MCL_coexpression_mm9:313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 6.85e-22 | 3 |
CNS neuron (sensu Vertebrata) | 1.33e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.33e-18 | 23 |
neuron of the dorsal spinal cord | 1.23e-14 | 2 |
neuron | 9.07e-13 | 33 |
neuronal stem cell | 9.07e-13 | 33 |
neuroblast | 9.07e-13 | 33 |
electrically signaling cell | 9.07e-13 | 33 |
electrically responsive cell | 1.07e-10 | 39 |
electrically active cell | 1.07e-10 | 39 |
raphe nuclei neuron | 2.41e-10 | 3 |
neural cell | 1.24e-09 | 43 |
ectodermal cell | 2.13e-09 | 44 |
neurectodermal cell | 2.13e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.