FFCP PHASE1:Mm9::chr19:7169351..7169356,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2276|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:7169351..7169356,-|id=chr19:7169351..7169356,-|ontology_enrichment_celltype=CL:0000540!2.10e-12!33;CL:0000047!2.10e-12!33;CL:0000031!2.10e-12!33;CL:0000404!2.10e-12!33;CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23;CL:0000221!7.21e-09!44;CL:0000133!7.21e-09!44;CL:0002319!1.21e-08!43;CL:0000393!1.72e-08!39;CL:0000211!1.72e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.59e-16,23;CL:0000337,4.59e-16,23;CL:0000540,9.03e-15,33;CL:0000047,9.03e-15,33;CL:0000031,9.03e-15,33;CL:0000404,9.03e-15,33;CL:0000393,1.71e-11,39;CL:0000211,1.71e-11,39;CL:0002319,7.73e-10,43;CL:0000221,1.79e-09,44;CL:0000133,1.79e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.86e-27!73;UBERON:0005743!5.86e-27!73;UBERON:0000073!3.13e-25!75;UBERON:0001016!3.13e-25!75;UBERON:0004121!6.94e-24!102;UBERON:0000924!6.94e-24!102;UBERON:0006601!6.94e-24!102;UBERON:0001049!2.39e-22!52;UBERON:0005068!2.39e-22!52;UBERON:0006241!2.39e-22!52;UBERON:0007135!2.39e-22!52;UBERON:0002346!5.79e-22!71;UBERON:0003075!5.79e-22!71;UBERON:0007284!5.79e-22!71;UBERON:0000033!3.85e-20!63;UBERON:0000955!5.20e-20!50;UBERON:0006238!5.20e-20!50;UBERON:0003056!7.51e-20!49;UBERON:0003080!1.03e-19!40;UBERON:0002616!1.85e-19!49;UBERON:0002780!4.75e-19!39;UBERON:0001890!4.75e-19!39;UBERON:0006240!4.75e-19!39;UBERON:0002020!1.46e-16!34;UBERON:0002791!4.96e-14!29;UBERON:0003528!4.96e-14!29;UBERON:0001893!4.96e-14!29;UBERON:0007811!1.24e-11!86;UBERON:0000153!1.80e-11!94;UBERON:0000956!2.00e-10!21;UBERON:0001869!2.00e-10!21;UBERON:0000203!2.00e-10!21;UBERON:0002021!4.45e-08!10;UBERON:0000411!4.45e-08!10;UBERON:0001950!4.45e-08!10;UBERON:0002619!5.76e-08!17;UBERON:0000468!7.56e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.15e-35,73;UBERON:0001016,1.09e-33,75;UBERON:0000073,1.26e-33,54;UBERON:0001049,4.74e-33,52;UBERON:0005068,4.74e-33,52;UBERON:0006241,4.74e-33,52;UBERON:0007135,4.74e-33,52;UBERON:0003080,2.91e-30,40;UBERON:0000955,1.69e-29,47;UBERON:0006238,1.69e-29,47;UBERON:0002780,5.12e-29,39;UBERON:0001890,5.12e-29,39;UBERON:0006240,5.12e-29,39;UBERON:0002616,1.80e-28,46;UBERON:0002346,8.32e-28,64;UBERON:0003075,8.32e-28,64;UBERON:0007284,8.32e-28,64;UBERON:0004121,4.84e-26,95;UBERON:0000924,4.84e-26,95;UBERON:0006601,4.84e-26,95;UBERON:0002020,1.41e-25,34;UBERON:0003056,2.17e-24,49;UBERON:0010371,4.12e-24,73;UBERON:0003528,2.27e-22,29;UBERON:0002791,2.27e-22,29;UBERON:0001893,2.27e-22,29;UBERON:0000956,1.03e-16,21;UBERON:0001869,1.03e-16,21;UBERON:0000203,1.03e-16,21;UBERON:0010314,1.53e-15,92;UBERON:0002021,2.35e-14,10;UBERON:0000411,2.35e-14,10;UBERON:0001950,2.35e-14,10;UBERON:0002619,4.81e-12,17;UBERON:0000025,2.05e-09,114;UBERON:0004111,4.34e-08,122;UBERON:0000007,7.70e-08,8;UBERON:0003296,7.70e-08,8;UBERON:0010133,7.70e-08,8;UBERON:0001894,2.01e-07,10;UBERON:0006222,2.01e-07,10;UBERON:0002420,8.51e-07,8;UBERON:0007245,8.51e-07,8;UBERON:0010009,8.51e-07,8;UBERON:0010011,8.51e-07,8;UBERON:0000454,8.51e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,2.48855069540346,3.10513658162888,3.57552434297349,1.42825492201902,1.98781686856452,0.489963196859816,1.15014565221884,1.83843757322004,0,2.42605942361857,3.37934373163736,0.659431438650969,1.73826522844578,1.04182674111352,1.95428099300967,1.68828783009504,3.51435969886663,4.41942878210502,1.56608848879013,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,2.34224637609238,0.628340120440365,0,0,0,0,2.54644086988199,2.28750301409313,1.13088916901578,2.25971616249959,2.55715457330331,1.0389402227978,0.648965052271031,0.611036183101898,0,0.505445516867349,0.210441855886474,0.780722657776222,0,0.900310649026746,1.65775299619287,0.612328492361951,0.640568601424249,0.749613796477831,0.258703370739016,0.646703978798527,0.189106080167819,0.703804496655795,0,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.420579897128254,2.16099685996497,0,0,0.853153002140936,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.814605311381257,2.32742984601151,0.49095073923223,0.948548056863859,4.723524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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2276 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:7169351..7169356,- | |||
|id=chr19:7169351..7169356,- | |||
|ontology_enrichment_celltype=CL:0000540!2.10e-12!33;CL:0000047!2.10e-12!33;CL:0000031!2.10e-12!33;CL:0000404!2.10e-12!33;CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23;CL:0000221!7.21e-09!44;CL:0000133!7.21e-09!44;CL:0002319!1.21e-08!43;CL:0000393!1.72e-08!39;CL:0000211!1.72e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.59e-16,23;CL:0000337,4.59e-16,23;CL:0000540,9.03e-15,33;CL:0000047,9.03e-15,33;CL:0000031,9.03e-15,33;CL:0000404,9.03e-15,33;CL:0000393,1.71e-11,39;CL:0000211,1.71e-11,39;CL:0002319,7.73e-10,43;CL:0000221,1.79e-09,44;CL:0000133,1.79e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.86e-27!73;UBERON:0005743!5.86e-27!73;UBERON:0000073!3.13e-25!75;UBERON:0001016!3.13e-25!75;UBERON:0004121!6.94e-24!102;UBERON:0000924!6.94e-24!102;UBERON:0006601!6.94e-24!102;UBERON:0001049!2.39e-22!52;UBERON:0005068!2.39e-22!52;UBERON:0006241!2.39e-22!52;UBERON:0007135!2.39e-22!52;UBERON:0002346!5.79e-22!71;UBERON:0003075!5.79e-22!71;UBERON:0007284!5.79e-22!71;UBERON:0000033!3.85e-20!63;UBERON:0000955!5.20e-20!50;UBERON:0006238!5.20e-20!50;UBERON:0003056!7.51e-20!49;UBERON:0003080!1.03e-19!40;UBERON:0002616!1.85e-19!49;UBERON:0002780!4.75e-19!39;UBERON:0001890!4.75e-19!39;UBERON:0006240!4.75e-19!39;UBERON:0002020!1.46e-16!34;UBERON:0002791!4.96e-14!29;UBERON:0003528!4.96e-14!29;UBERON:0001893!4.96e-14!29;UBERON:0007811!1.24e-11!86;UBERON:0000153!1.80e-11!94;UBERON:0000956!2.00e-10!21;UBERON:0001869!2.00e-10!21;UBERON:0000203!2.00e-10!21;UBERON:0002021!4.45e-08!10;UBERON:0000411!4.45e-08!10;UBERON:0001950!4.45e-08!10;UBERON:0002619!5.76e-08!17;UBERON:0000468!7.56e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.15e-35,73;UBERON:0001016,1.09e-33,75;UBERON:0000073,1.26e-33,54;UBERON:0001049,4.74e-33,52;UBERON:0005068,4.74e-33,52;UBERON:0006241,4.74e-33,52;UBERON:0007135,4.74e-33,52;UBERON:0003080,2.91e-30,40;UBERON:0000955,1.69e-29,47;UBERON:0006238,1.69e-29,47;UBERON:0002780,5.12e-29,39;UBERON:0001890,5.12e-29,39;UBERON:0006240,5.12e-29,39;UBERON:0002616,1.80e-28,46;UBERON:0002346,8.32e-28,64;UBERON:0003075,8.32e-28,64;UBERON:0007284,8.32e-28,64;UBERON:0004121,4.84e-26,95;UBERON:0000924,4.84e-26,95;UBERON:0006601,4.84e-26,95;UBERON:0002020,1.41e-25,34;UBERON:0003056,2.17e-24,49;UBERON:0010371,4.12e-24,73;UBERON:0003528,2.27e-22,29;UBERON:0002791,2.27e-22,29;UBERON:0001893,2.27e-22,29;UBERON:0000956,1.03e-16,21;UBERON:0001869,1.03e-16,21;UBERON:0000203,1.03e-16,21;UBERON:0010314,1.53e-15,92;UBERON:0002021,2.35e-14,10;UBERON:0000411,2.35e-14,10;UBERON:0001950,2.35e-14,10;UBERON:0002619,4.81e-12,17;UBERON:0000025,2.05e-09,114;UBERON:0004111,4.34e-08,122;UBERON:0000007,7.70e-08,8;UBERON:0003296,7.70e-08,8;UBERON:0010133,7.70e-08,8;UBERON:0001894,2.01e-07,10;UBERON:0006222,2.01e-07,10;UBERON:0002420,8.51e-07,8;UBERON:0007245,8.51e-07,8;UBERON:0010009,8.51e-07,8;UBERON:0010011,8.51e-07,8;UBERON:0000454,8.51e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,2.48855069540346,3.10513658162888,3.57552434297349,1.42825492201902,1.98781686856452,0.489963196859816,1.15014565221884,1.83843757322004,0,2.42605942361857,3.37934373163736,0.659431438650969,1.73826522844578,1.04182674111352,1.95428099300967,1.68828783009504,3.51435969886663,4.41942878210502,1.56608848879013,0.931997229126503,0,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,2.34224637609238,0.628340120440365,0,0,0,0,2.54644086988199,2.28750301409313,1.13088916901578,2.25971616249959,2.55715457330331,1.0389402227978,0.648965052271031,0.611036183101898,0,0.505445516867349,0.210441855886474,0.780722657776222,0,0.900310649026746,1.65775299619287,0.612328492361951,0.640568601424249,0.749613796477831,0.258703370739016,0.646703978798527,0.189106080167819,0.703804496655795,0,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.420579897128254,2.16099685996497,0,0,0.853153002140936,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.814605311381257,2.32742984601151,0.49095073923223,0.948548056863859,4.72352473534727,3.45397201251025,1.97435462274881,0,0,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0,0.624075346229121,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,1.12385412991454,0.703270119553219,0.163934945376675,0,0,0.780877488593277,2.80050417052639,0.716906393857656,0.891194696329576,0.849229592366497,1.21443210502468,1.16902343164525,1.18586333383957,1.92792789853084,0.709700426041343,0.890328018336276,0.325773918707152,0.329940245945071,1.32745138339963,0.728341908464944,0.302323556964751,0,0,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,0,1.05418608574999,0,1.70219802876894,1.44048875225048,1.16422815404479,3.42939256050548,2.48276327099183,4.8159580752559,4.11372551505302,0.913394847343798,0,0.21183207086382,0.220528398054962,0.16488625294148,0.645857706783622,0.482503399425247,1.3130957840345,0.164140899745061,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.609958401380546,0.540026704109006,0.836353184057875,0.87345025498471,0.134864346384821,0,0,0,0,1.12738587736838,0.897099276263873,0,0.194451188344048,0.645799117388655,2.19642963138012,1.99507305697782,2.0832701575032,2.20204623293993,1.44950472495604,1.15212002503146,0,0.608175645870493,0.616265742988964,0.51968329191118,0.358053391334963,0,0.240390899039938,0.147689527174577,0,0.381034033274999,0.100826185136841,0.194915761479505,0,0,0.680191150845634,0,0,0,0.19318959403219,0,1.09890974560359,0.857473516316263,0,2.82375921308533,3.22227665555024,2.86447756719698,4.29632955859219,3.42541259885321,1.5107877947794,4.05013500139084,3.15224842256954,4.98456649882625,6.73088405277366,0.103787347584177,0,0.341467211508268,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0.463537303779422,0,1.64834360321323,0.294397840268795,0.342869252385415,0.532427418478012,0.715308569841963,0,0.282328141245992,0.338458431566706,0.365855945745545,1.05227884575137,0.679020569229309,0,0.237270036248348,0.29551344712669,2.04615521584845,0.464810523557898,0,1.24905288968973,0.467863216890817,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p@chr19:7169351..7169356,- | |||
}} |
Revision as of 18:24, 13 September 2013
Short description: | p@chr19:7169351..7169356, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7169351..7169356, - |
Coexpression cluster: | MCL_coexpression_mm9:2276 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.59e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.59e-16 | 23 |
neuron | 9.03e-15 | 33 |
neuronal stem cell | 9.03e-15 | 33 |
neuroblast | 9.03e-15 | 33 |
electrically signaling cell | 9.03e-15 | 33 |
electrically responsive cell | 1.71e-11 | 39 |
electrically active cell | 1.71e-11 | 39 |
neural cell | 7.73e-10 | 43 |
ectodermal cell | 1.79e-09 | 44 |
neurectodermal cell | 1.79e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.