FFCP PHASE1:Hg19::chr6:35265652..35265663,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50619|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2760|TSSclassifier=S|UniProt=F5H853|association_with_transcript=57bp_to_ENST00000542066,uc010jvt.2_5end|description=CAGE_peak_2_at_DEF6_5end|id=chr6:35265652..35265663,+|ontology_enrichment_celltype=CL:0000037!2.21e-61!172;CL:0000566!2.21e-61!172;CL:0002032!8.68e-59!165;CL:0000837!8.68e-59!165;CL:0000988!5.74e-57!182;CL:0000738!2.74e-47!140;CL:0002031!8.40e-39!124;CL:0002087!2.45e-38!119;CL:0000763!3.57e-38!112;CL:0000049!3.57e-38!112;CL:0000766!1.09e-25!76;CL:0000557!1.86e-21!71;CL:0002009!9.60e-20!65;CL:0000839!2.13e-19!70;CL:0002057!1.45e-18!42;CL:0002194!2.51e-18!63;CL:0000576!2.51e-18!63;CL:0000040!2.51e-18!63;CL:0000559!2.51e-18!63;CL:0000542!1.60e-17!53;CL:0000051!1.60e-17!53;CL:0000838!3.10e-17!52;CL:0000860!3.72e-16!45;CL:0000084!3.17e-15!25;CL:0000827!3.17e-15!25;CL:0000791!3.90e-12!18;CL:0000789!3.90e-12!18;CL:0002420!3.90e-12!18;CL:0002419!3.90e-12!18;CL:0000790!3.90e-12!18;CL:0000134!4.51e-08!358;CL:0000625!1.08e-07!11;CL:0002320!2.21e-07!365;CL:0000094!7.88e-07!8|ontology_enrichment_celltype_v019=CL:0000084;4.03e-19;25!CL:0000791;3.28e-17;18!CL:0000789;3.28e-17;18!CL:0002419;3.28e-17;18!CL:0000763;4.86e-16;100!CL:0000860;2.62e-14;33!CL:0002057;2.62e-14;33!CL:0000576;1.75e-13;48!CL:0000766;4.61e-13;69!CL:0000473;1.69e-12;39!CL:0000234;1.69e-12;39!CL:0002087;1.56e-10;104!CL:0000094;2.21e-10;8!CL:0000988;4.02e-10;177!CL:0000625;7.12e-10;11!CL:0000738;1.41e-09;136!CL:0000624;1.75e-08;6!CL:0000542;5.46e-08;53!CL:0000081;5.20e-07;11!CL:0002393;9.41e-07;6!CL:0002397;9.41e-07;6|ontology_enrichment_celltype_v019_2=CL:0000037,8.68e-65,168;CL:0002032,1.80e-62,161;CL:0000837,1.80e-62,161;CL:0000988,9.94e-60,177;CL:0000763,1.04e-46,108;CL:0000049,1.04e-46,108;CL:0000738,3.15e-46,136;CL:0002031,3.78e-38,120;CL:0002087,1.59e-36,115;CL:0000766,3.69e-30,72;CL:0000557,3.57e-24,67;CL:0002009,4.03e-22,61;CL:0000473,1.02e-21,48;CL:0000234,1.02e-21,48;CL:0000839,1.61e-21,66;CL:0000860,1.77e-21,42;CL:0002057,1.77e-21,42;CL:0002194,5.07e-20,59;CL:0000576,5.07e-20,59;CL:0000040,5.07e-20,59;CL:0000559,5.07e-20,59;CL:0000084,2.11e-19,25;CL:0000827,2.11e-19,25;CL:0000791,2.22e-17,18;CL:0000789,2.22e-17,18;CL:0002420,2.22e-17,18;CL:0002419,2.22e-17,18;CL:0000790,2.22e-17,18;CL:0000134,3.38e-14,354;CL:0000838,4.66e-14,52;CL:0000542,1.29e-13,53;CL:0000051,1.29e-13,53;CL:0002320,2.33e-13,361;CL:0000219,1.78e-10,386;CL:0000094,2.53e-10,8;CL:0000625,4.39e-10,11;CL:0000624,1.77e-08,6;CL:0002393,2.57e-07,9;CL:0002397,2.57e-07,9;CL:0000048,3.77e-07,427;CL:0000723,4.60e-07,433;CL:0000081,5.69e-07,11;CL:0000034,8.69e-07,441|ontology_enrichment_development_v019=CL:0000790;3.28e-17;18!CL:0002057;1.77e-15;42!CL:0000049;3.74e-13;108!CL:0000051;5.46e-08;53|ontology_enrichment_disease=DOID:1240!5.66e-18!39;DOID:2531!2.64e-16!51;DOID:0060083!2.64e-16!51;DOID:8692!6.24e-16!31|ontology_enrichment_disease_v019=DOID:8692;1.88e-20;31!DOID:1240;3.71e-16;39!DOID:2531;8.09e-11;51!DOID:0060083;8.09e-11;51|ontology_enrichment_disease_v019_2=DOID:8692,3.80e-21,31;DOID:1240,4.28e-21,39;DOID:2531,4.68e-16,51;DOID:0060083,4.68e-16,51|ontology_enrichment_uberon=UBERON:0002390!1.33e-27!102;UBERON:0003061!1.33e-27!102;UBERON:0002193!4.22e-24!112;UBERON:0002371!6.14e-18!80;UBERON:0001474!5.27e-15!86;UBERON:0002405!5.41e-13!115;UBERON:0004765!2.32e-12!101;UBERON:0001434!2.32e-12!101;UBERON:0000178!1.29e-08!15;UBERON:0000179!1.29e-08!15;UBERON:0000463!1.29e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.21e-11;15!UBERON:0000179;2.21e-11;15!UBERON:0000463;2.21e-11;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.90e-31,98;UBERON:0003061,1.90e-31,98;UBERON:0002193,3.99e-29,108;UBERON:0002371,1.04e-20,76;UBERON:0002405,3.69e-20,93;UBERON:0001474,3.58e-18,82;UBERON:0004765,2.38e-15,90;UBERON:0001434,1.64e-12,100;UBERON:0002384,3.14e-12,371;UBERON:0000178,2.19e-11,15;UBERON:0000179,2.19e-11,15;UBERON:0000463,2.19e-11,15;UBERON:0003081,1.52e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.61130724598361,0.738905305049512,1.33808328233255,1.18009283054671,6.1412703695554,2.16742572642506,0,0.30120591877825,0.369754010166788,0.154934401160603,0,1.46800219667424,2.76997704265939,3.40925560699241,3.90619567288533,0.671746422719773,0.647787332037959,0.77272670290256,3.34415949192999,0.377875943688809,3.15359279544161,2.09186133215116,2.05583944010913,1.23882548358041,1.7261543539329,2.56160706529101,1.6553756092201,1.72372840368309,2.5819387343353,1.35426486594342,1.50593871634084,0.545812300115692,1.12361742222542,1.83650335422542,3.53021929783703,2.55734850319616,1.31940520074686,1.39624560335142,0.426224750532694,0.870627715885752,0.56738522469114,0,2.76373531782418,1.0429658368404,2.17188844705117,2.42159801053347,1.47311054395026,0.949387162322653,2.95757400836718,2.12604299965044,1.67726916406701,3.36985893439485,2.85336096398862,4.17886525412408,1.4250637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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50619 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2760 | |||
|TSSclassifier=S | |||
|UniProt=F5H853 | |||
|association_with_transcript=57bp_to_ENST00000542066,uc010jvt.2_5end | |||
|description=CAGE_peak_2_at_DEF6_5end | |||
|id=chr6:35265652..35265663,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.21e-61!172;CL:0000566!2.21e-61!172;CL:0002032!8.68e-59!165;CL:0000837!8.68e-59!165;CL:0000988!5.74e-57!182;CL:0000738!2.74e-47!140;CL:0002031!8.40e-39!124;CL:0002087!2.45e-38!119;CL:0000763!3.57e-38!112;CL:0000049!3.57e-38!112;CL:0000766!1.09e-25!76;CL:0000557!1.86e-21!71;CL:0002009!9.60e-20!65;CL:0000839!2.13e-19!70;CL:0002057!1.45e-18!42;CL:0002194!2.51e-18!63;CL:0000576!2.51e-18!63;CL:0000040!2.51e-18!63;CL:0000559!2.51e-18!63;CL:0000542!1.60e-17!53;CL:0000051!1.60e-17!53;CL:0000838!3.10e-17!52;CL:0000860!3.72e-16!45;CL:0000084!3.17e-15!25;CL:0000827!3.17e-15!25;CL:0000791!3.90e-12!18;CL:0000789!3.90e-12!18;CL:0002420!3.90e-12!18;CL:0002419!3.90e-12!18;CL:0000790!3.90e-12!18;CL:0000134!4.51e-08!358;CL:0000625!1.08e-07!11;CL:0002320!2.21e-07!365;CL:0000094!7.88e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.03e-19;25!CL:0000791;3.28e-17;18!CL:0000789;3.28e-17;18!CL:0002419;3.28e-17;18!CL:0000763;4.86e-16;100!CL:0000860;2.62e-14;33!CL:0002057;2.62e-14;33!CL:0000576;1.75e-13;48!CL:0000766;4.61e-13;69!CL:0000473;1.69e-12;39!CL:0000234;1.69e-12;39!CL:0002087;1.56e-10;104!CL:0000094;2.21e-10;8!CL:0000988;4.02e-10;177!CL:0000625;7.12e-10;11!CL:0000738;1.41e-09;136!CL:0000624;1.75e-08;6!CL:0000542;5.46e-08;53!CL:0000081;5.20e-07;11!CL:0002393;9.41e-07;6!CL:0002397;9.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.68e-65,168;CL:0002032,1.80e-62,161;CL:0000837,1.80e-62,161;CL:0000988,9.94e-60,177;CL:0000763,1.04e-46,108;CL:0000049,1.04e-46,108;CL:0000738,3.15e-46,136;CL:0002031,3.78e-38,120;CL:0002087,1.59e-36,115;CL:0000766,3.69e-30,72;CL:0000557,3.57e-24,67;CL:0002009,4.03e-22,61;CL:0000473,1.02e-21,48;CL:0000234,1.02e-21,48;CL:0000839,1.61e-21,66;CL:0000860,1.77e-21,42;CL:0002057,1.77e-21,42;CL:0002194,5.07e-20,59;CL:0000576,5.07e-20,59;CL:0000040,5.07e-20,59;CL:0000559,5.07e-20,59;CL:0000084,2.11e-19,25;CL:0000827,2.11e-19,25;CL:0000791,2.22e-17,18;CL:0000789,2.22e-17,18;CL:0002420,2.22e-17,18;CL:0002419,2.22e-17,18;CL:0000790,2.22e-17,18;CL:0000134,3.38e-14,354;CL:0000838,4.66e-14,52;CL:0000542,1.29e-13,53;CL:0000051,1.29e-13,53;CL:0002320,2.33e-13,361;CL:0000219,1.78e-10,386;CL:0000094,2.53e-10,8;CL:0000625,4.39e-10,11;CL:0000624,1.77e-08,6;CL:0002393,2.57e-07,9;CL:0002397,2.57e-07,9;CL:0000048,3.77e-07,427;CL:0000723,4.60e-07,433;CL:0000081,5.69e-07,11;CL:0000034,8.69e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;3.28e-17;18!CL:0002057;1.77e-15;42!CL:0000049;3.74e-13;108!CL:0000051;5.46e-08;53 | |||
|ontology_enrichment_disease=DOID:1240!5.66e-18!39;DOID:2531!2.64e-16!51;DOID:0060083!2.64e-16!51;DOID:8692!6.24e-16!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.88e-20;31!DOID:1240;3.71e-16;39!DOID:2531;8.09e-11;51!DOID:0060083;8.09e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.80e-21,31;DOID:1240,4.28e-21,39;DOID:2531,4.68e-16,51;DOID:0060083,4.68e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-27!102;UBERON:0003061!1.33e-27!102;UBERON:0002193!4.22e-24!112;UBERON:0002371!6.14e-18!80;UBERON:0001474!5.27e-15!86;UBERON:0002405!5.41e-13!115;UBERON:0004765!2.32e-12!101;UBERON:0001434!2.32e-12!101;UBERON:0000178!1.29e-08!15;UBERON:0000179!1.29e-08!15;UBERON:0000463!1.29e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.21e-11;15!UBERON:0000179;2.21e-11;15!UBERON:0000463;2.21e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.90e-31,98;UBERON:0003061,1.90e-31,98;UBERON:0002193,3.99e-29,108;UBERON:0002371,1.04e-20,76;UBERON:0002405,3.69e-20,93;UBERON:0001474,3.58e-18,82;UBERON:0004765,2.38e-15,90;UBERON:0001434,1.64e-12,100;UBERON:0002384,3.14e-12,371;UBERON:0000178,2.19e-11,15;UBERON:0000179,2.19e-11,15;UBERON:0000463,2.19e-11,15;UBERON:0003081,1.52e-07,203 | |||
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| |||
|short_description=p2@DEF6 | |||
}} |
Revision as of 20:40, 13 September 2013
Short description: | p2@DEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DEF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENST00000542066, uc010jvt.2_5end |
EntrezGene: | DEF6 |
HGNC: | 2760 |
UniProt: | F5H853 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.90e-31 | 98 |
blood island | 1.90e-31 | 98 |
hemolymphoid system | 3.99e-29 | 108 |
bone marrow | 1.04e-20 | 76 |
immune system | 3.69e-20 | 93 |
bone element | 3.58e-18 | 82 |
skeletal element | 2.38e-15 | 90 |
skeletal system | 1.64e-12 | 100 |
connective tissue | 3.14e-12 | 371 |
blood | 2.19e-11 | 15 |
haemolymphatic fluid | 2.19e-11 | 15 |
organism substance | 2.19e-11 | 15 |
lateral plate mesoderm | 1.52e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.80e-21 | 31 |
leukemia | 4.28e-21 | 39 |
hematologic cancer | 4.68e-16 | 51 |
immune system cancer | 4.68e-16 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.