FFCP PHASE1:Mm9::chr3:106525050..106525057,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=241|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:106525050..106525057,+|id=chr3:106525050..106525057,+|ontology_enrichment_celltype=CL:0000988!2.54e-22!32;CL:0002032!2.54e-22!32;CL:0000037!2.54e-22!32;CL:0000566!2.54e-22!32;CL:0000837!2.54e-22!32;CL:0002320!1.63e-17!46;CL:0000134!1.63e-17!46;CL:0000063!2.58e-17!66;CL:0000838!3.93e-17!12;CL:0002031!4.13e-16!25;CL:0000084!6.76e-16!11;CL:0000827!6.76e-16!11;CL:0000219!7.69e-16!54;CL:0000542!1.59e-15!13;CL:0000051!1.59e-15!13;CL:0000791!5.70e-14!9;CL:0000789!5.70e-14!9;CL:0002420!5.70e-14!9;CL:0002419!5.70e-14!9;CL:0000790!5.70e-14!9;CL:0000624!1.61e-12!8;CL:0000144!1.64e-12!121;CL:0000012!1.64e-12!121;CL:0000034!6.60e-12!97;CL:0000738!5.16e-11!17;CL:0002087!5.16e-11!17;CL:0002371!1.78e-10!118;CL:0000548!3.11e-10!115;CL:0000004!3.11e-10!115;CL:0000255!3.11e-10!115;CL:0000893!1.17e-09!6;CL:0002489!1.17e-09!6;CL:0000898!1.17e-09!6;CL:0000809!1.17e-09!6;CL:0000810!1.17e-09!6;CL:0000895!1.17e-09!6;CL:0000808!1.17e-09!6;CL:0000894!1.17e-09!6;CL:0000806!1.17e-09!6;CL:0000807!1.17e-09!6;CL:0000805!1.17e-09!6;CL:0002425!1.17e-09!6;CL:0002436!1.17e-09!6;CL:0002427!1.17e-09!6;CL:0002428!1.17e-09!6;CL:0002429!1.17e-09!6;CL:0002433!1.17e-09!6;CL:0002431!1.17e-09!6;CL:0002432!1.17e-09!6;CL:0000049!5.28e-09!19;CL:0000723!6.96e-09!91;CL:0000048!6.96e-09!91|ontology_enrichment_celltype_v019_2=CL:0000791,1.13e-48,9;CL:0000789,1.13e-48,9;CL:0002420,1.13e-48,9;CL:0002419,1.13e-48,9;CL:0000790,1.13e-48,9;CL:0000624,4.00e-43,8;CL:0000084,1.14e-39,11;CL:0000827,1.14e-39,11;CL:0000838,2.72e-36,12;CL:0000542,1.97e-33,13;CL:0000051,1.97e-33,13;CL:0000893,3.26e-32,6;CL:0002489,3.26e-32,6;CL:0000898,3.26e-32,6;CL:0000809,3.26e-32,6;CL:0000810,3.26e-32,6;CL:0000895,3.26e-32,6;CL:0000808,3.26e-32,6;CL:0000894,3.26e-32,6;CL:0000806,3.26e-32,6;CL:0000807,3.26e-32,6;CL:0000805,3.26e-32,6;CL:0002425,3.26e-32,6;CL:0002436,3.26e-32,6;CL:0002427,3.26e-32,6;CL:0002428,3.26e-32,6;CL:0002429,3.26e-32,6;CL:0002433,3.26e-32,6;CL:0002431,3.26e-32,6;CL:0002432,3.26e-32,6;CL:0000988,1.06e-27,32;CL:0002032,1.06e-27,32;CL:0000037,1.06e-27,32;CL:0000837,1.06e-27,32;CL:0002031,9.12e-26,25;CL:0000738,2.39e-25,17;CL:0002087,2.39e-25,17;CL:0002320,6.62e-22,46;CL:0000134,6.62e-22,46;CL:0000219,2.08e-18,54;CL:0000034,4.74e-11,97;CL:0000723,3.45e-10,91;CL:0000048,3.45e-10,91;CL:0000764,7.12e-09,3;CL:0000765,7.12e-09,3;CL:0000038,7.12e-09,3;CL:0000547,7.12e-09,3;CL:0000625,4.10e-07,1;CL:0000815,6.09e-07,1;CL:0000792,6.09e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,7.12e-09,3;DOID:0060083,7.12e-09,3;DOID:1240,7.12e-09,3|ontology_enrichment_uberon=UBERON:0002384!1.63e-17!46;UBERON:0002390!7.01e-11!45;UBERON:0003061!7.01e-11!45;UBERON:0002193!7.61e-11!48;UBERON:0002370!8.07e-11!23;UBERON:0000974!8.07e-11!23;UBERON:0004807!8.07e-11!23;UBERON:0005058!8.07e-11!23;UBERON:0003351!8.07e-11!23;UBERON:0009113!8.07e-11!23;UBERON:0003295!8.07e-11!23;UBERON:0009722!8.07e-11!23;UBERON:0005562!8.07e-11!23;UBERON:0007690!8.07e-11!23;UBERON:0006562!3.45e-10!24;UBERON:0003408!3.45e-10!24;UBERON:0001557!3.45e-10!24;UBERON:0001042!3.45e-10!24;UBERON:0008814!3.45e-10!24;UBERON:0009145!3.45e-10!24;UBERON:0000072!7.63e-10!27;UBERON:0004177!8.61e-09!29;UBERON:0002405!6.29e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.62e-22,46;UBERON:0002370,4.37e-11,23;UBERON:0000974,4.37e-11,23;UBERON:0004807,4.37e-11,23;UBERON:0005058,4.37e-11,23;UBERON:0003351,4.37e-11,23;UBERON:0009113,4.37e-11,23;UBERON:0003295,4.37e-11,23;UBERON:0009722,4.37e-11,23;UBERON:0005562,4.37e-11,23;UBERON:0007690,4.37e-11,23;UBERON:0006562,1.34e-10,24;UBERON:0003408,1.34e-10,24;UBERON:0001557,1.34e-10,24;UBERON:0001042,1.34e-10,24;UBERON:0008814,1.34e-10,24;UBERON:0009145,1.34e-10,24;UBERON:0000072,2.38e-09,27;UBERON:0000077,3.68e-09,35;UBERON:0004177,1.16e-08,29;UBERON:0005057,1.16e-08,29;UBERON:0007811,7.56e-07,36|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,1.93684985162364,1.54867594366833,2.34064526321993,1.19852577757853,1.91453181588807,1.36960583944965,1.83582845079895,0.999329285446988,0.202475267389826,0,0.630924330716475,0.685572168028694,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,10.1604907753541,6.76571266343027,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,3.62681071005672,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,1.44932244350839,0,0,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0,0,2.54805239706646,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43778149407104,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0.136694227721025,0,0.339956859987711,0.419854356970974,1.65839968565309,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.358855426437903,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:106525050..106525057,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=241 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:106525050..106525057,+ | |||
|id=chr3:106525050..106525057,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.54e-22!32;CL:0002032!2.54e-22!32;CL:0000037!2.54e-22!32;CL:0000566!2.54e-22!32;CL:0000837!2.54e-22!32;CL:0002320!1.63e-17!46;CL:0000134!1.63e-17!46;CL:0000063!2.58e-17!66;CL:0000838!3.93e-17!12;CL:0002031!4.13e-16!25;CL:0000084!6.76e-16!11;CL:0000827!6.76e-16!11;CL:0000219!7.69e-16!54;CL:0000542!1.59e-15!13;CL:0000051!1.59e-15!13;CL:0000791!5.70e-14!9;CL:0000789!5.70e-14!9;CL:0002420!5.70e-14!9;CL:0002419!5.70e-14!9;CL:0000790!5.70e-14!9;CL:0000624!1.61e-12!8;CL:0000144!1.64e-12!121;CL:0000012!1.64e-12!121;CL:0000034!6.60e-12!97;CL:0000738!5.16e-11!17;CL:0002087!5.16e-11!17;CL:0002371!1.78e-10!118;CL:0000548!3.11e-10!115;CL:0000004!3.11e-10!115;CL:0000255!3.11e-10!115;CL:0000893!1.17e-09!6;CL:0002489!1.17e-09!6;CL:0000898!1.17e-09!6;CL:0000809!1.17e-09!6;CL:0000810!1.17e-09!6;CL:0000895!1.17e-09!6;CL:0000808!1.17e-09!6;CL:0000894!1.17e-09!6;CL:0000806!1.17e-09!6;CL:0000807!1.17e-09!6;CL:0000805!1.17e-09!6;CL:0002425!1.17e-09!6;CL:0002436!1.17e-09!6;CL:0002427!1.17e-09!6;CL:0002428!1.17e-09!6;CL:0002429!1.17e-09!6;CL:0002433!1.17e-09!6;CL:0002431!1.17e-09!6;CL:0002432!1.17e-09!6;CL:0000049!5.28e-09!19;CL:0000723!6.96e-09!91;CL:0000048!6.96e-09!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.13e-48,9;CL:0000789,1.13e-48,9;CL:0002420,1.13e-48,9;CL:0002419,1.13e-48,9;CL:0000790,1.13e-48,9;CL:0000624,4.00e-43,8;CL:0000084,1.14e-39,11;CL:0000827,1.14e-39,11;CL:0000838,2.72e-36,12;CL:0000542,1.97e-33,13;CL:0000051,1.97e-33,13;CL:0000893,3.26e-32,6;CL:0002489,3.26e-32,6;CL:0000898,3.26e-32,6;CL:0000809,3.26e-32,6;CL:0000810,3.26e-32,6;CL:0000895,3.26e-32,6;CL:0000808,3.26e-32,6;CL:0000894,3.26e-32,6;CL:0000806,3.26e-32,6;CL:0000807,3.26e-32,6;CL:0000805,3.26e-32,6;CL:0002425,3.26e-32,6;CL:0002436,3.26e-32,6;CL:0002427,3.26e-32,6;CL:0002428,3.26e-32,6;CL:0002429,3.26e-32,6;CL:0002433,3.26e-32,6;CL:0002431,3.26e-32,6;CL:0002432,3.26e-32,6;CL:0000988,1.06e-27,32;CL:0002032,1.06e-27,32;CL:0000037,1.06e-27,32;CL:0000837,1.06e-27,32;CL:0002031,9.12e-26,25;CL:0000738,2.39e-25,17;CL:0002087,2.39e-25,17;CL:0002320,6.62e-22,46;CL:0000134,6.62e-22,46;CL:0000219,2.08e-18,54;CL:0000034,4.74e-11,97;CL:0000723,3.45e-10,91;CL:0000048,3.45e-10,91;CL:0000764,7.12e-09,3;CL:0000765,7.12e-09,3;CL:0000038,7.12e-09,3;CL:0000547,7.12e-09,3;CL:0000625,4.10e-07,1;CL:0000815,6.09e-07,1;CL:0000792,6.09e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.12e-09,3;DOID:0060083,7.12e-09,3;DOID:1240,7.12e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.63e-17!46;UBERON:0002390!7.01e-11!45;UBERON:0003061!7.01e-11!45;UBERON:0002193!7.61e-11!48;UBERON:0002370!8.07e-11!23;UBERON:0000974!8.07e-11!23;UBERON:0004807!8.07e-11!23;UBERON:0005058!8.07e-11!23;UBERON:0003351!8.07e-11!23;UBERON:0009113!8.07e-11!23;UBERON:0003295!8.07e-11!23;UBERON:0009722!8.07e-11!23;UBERON:0005562!8.07e-11!23;UBERON:0007690!8.07e-11!23;UBERON:0006562!3.45e-10!24;UBERON:0003408!3.45e-10!24;UBERON:0001557!3.45e-10!24;UBERON:0001042!3.45e-10!24;UBERON:0008814!3.45e-10!24;UBERON:0009145!3.45e-10!24;UBERON:0000072!7.63e-10!27;UBERON:0004177!8.61e-09!29;UBERON:0002405!6.29e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.62e-22,46;UBERON:0002370,4.37e-11,23;UBERON:0000974,4.37e-11,23;UBERON:0004807,4.37e-11,23;UBERON:0005058,4.37e-11,23;UBERON:0003351,4.37e-11,23;UBERON:0009113,4.37e-11,23;UBERON:0003295,4.37e-11,23;UBERON:0009722,4.37e-11,23;UBERON:0005562,4.37e-11,23;UBERON:0007690,4.37e-11,23;UBERON:0006562,1.34e-10,24;UBERON:0003408,1.34e-10,24;UBERON:0001557,1.34e-10,24;UBERON:0001042,1.34e-10,24;UBERON:0008814,1.34e-10,24;UBERON:0009145,1.34e-10,24;UBERON:0000072,2.38e-09,27;UBERON:0000077,3.68e-09,35;UBERON:0004177,1.16e-08,29;UBERON:0005057,1.16e-08,29;UBERON:0007811,7.56e-07,36 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,1.93684985162364,1.54867594366833,2.34064526321993,1.19852577757853,1.91453181588807,1.36960583944965,1.83582845079895,0.999329285446988,0.202475267389826,0,0.630924330716475,0.685572168028694,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,10.1604907753541,6.76571266343027,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,3.62681071005672,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0,0.919218786610021,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,1.44932244350839,0,0,0,0.649776417447669,0,0.140444420131752,0,0.259786004602869,0,0,0,2.54805239706646,0,0.216491041011214,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43778149407104,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0.199034266818493,0.702213187313235,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0.136694227721025,0,0.339956859987711,0.419854356970974,1.65839968565309,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.358855426437903,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:106525050..106525057,+ | |||
}} |
Revision as of 01:08, 14 September 2013
Short description: | p@chr3:106525050..106525057, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:106525050..106525057, + |
Coexpression cluster: | MCL_coexpression_mm9:241 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.62e-22 | 46 |
thymus | 4.37e-11 | 23 |
neck | 4.37e-11 | 23 |
respiratory system epithelium | 4.37e-11 | 23 |
hemolymphoid system gland | 4.37e-11 | 23 |
pharyngeal epithelium | 4.37e-11 | 23 |
thymic region | 4.37e-11 | 23 |
pharyngeal gland | 4.37e-11 | 23 |
entire pharyngeal arch endoderm | 4.37e-11 | 23 |
thymus primordium | 4.37e-11 | 23 |
early pharyngeal endoderm | 4.37e-11 | 23 |
pharynx | 1.34e-10 | 24 |
gland of gut | 1.34e-10 | 24 |
upper respiratory tract | 1.34e-10 | 24 |
chordate pharynx | 1.34e-10 | 24 |
pharyngeal arch system | 1.34e-10 | 24 |
pharyngeal region of foregut | 1.34e-10 | 24 |
segment of respiratory tract | 2.38e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 3.68e-09 | 35 |
hemopoietic organ | 1.16e-08 | 29 |
immune organ | 1.16e-08 | 29 |
craniocervical region | 7.56e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.12e-09 | 3 |
immune system cancer | 7.12e-09 | 3 |
leukemia | 7.12e-09 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.