FFCP PHASE1:Hg19::chr7:70596902..70596919,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64409|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16347|TSSclassifier=S|UniProt=Q6IS24|association_with_transcript=-235bp_to_ENST00000333538_5end|coexpression_cluster_id=C1539|description=CAGE_peak_4_at_WBSCR17_5end|id=chr7:70596902..70596919,+|ontology_enrichment_celltype=CL:0000540!9.07e-09!6;CL:0000031!9.07e-09!6;CL:0000404!9.07e-09!6;CL:0002322!3.75e-08!5|ontology_enrichment_celltype_v019=CL:0002322;9.84e-09;5!CL:0002605;5.58e-07;3|ontology_enrichment_celltype_v019_2=CL:0002322,1.12e-08,5;CL:0002605,4.97e-07,3|ontology_enrichment_development_v019=UBERON:0006215;2.59e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.33e-10;2|ontology_enrichment_disease_v019_2=DOID:114,6.10e-11,2|ontology_enrichment_uberon=UBERON:0007023!9.49e-44!115;UBERON:0001017!1.76e-35!82;UBERON:0000073!3.54e-35!94;UBERON:0001016!3.54e-35!94;UBERON:0005743!1.18e-34!86;UBERON:0001049!4.46e-34!57;UBERON:0005068!4.46e-34!57;UBERON:0006241!4.46e-34!57;UBERON:0007135!4.46e-34!57;UBERON:0002346!3.10e-31!90;UBERON:0002616!1.05e-30!59;UBERON:0000955!6.30e-29!69;UBERON:0006238!6.30e-29!69;UBERON:0001893!1.88e-28!34;UBERON:0003075!7.50e-28!86;UBERON:0007284!7.50e-28!86;UBERON:0002780!1.02e-27!41;UBERON:0001890!1.02e-27!41;UBERON:0006240!1.02e-27!41;UBERON:0002791!4.34e-27!33;UBERON:0003080!8.02e-27!42;UBERON:0001869!9.57e-27!32;UBERON:0002020!2.00e-26!34;UBERON:0003528!2.00e-26!34;UBERON:0000956!2.74e-23!25;UBERON:0000203!2.74e-23!25;UBERON:0000924!1.55e-22!173;UBERON:0006601!1.55e-22!173;UBERON:0004121!5.03e-20!169;UBERON:0002619!1.25e-19!22;UBERON:0000153!2.59e-19!129;UBERON:0007811!2.59e-19!129;UBERON:0003056!6.04e-19!61;UBERON:0001950!2.88e-17!20;UBERON:0000033!3.42e-17!123;UBERON:0000200!4.11e-09!6;UBERON:0004733!4.55e-09!12;UBERON:0002028!4.55e-09!12;UBERON:0007277!4.55e-09!12;UBERON:0000922!1.68e-08!612;UBERON:0000468!1.81e-08!659;UBERON:0001871!2.02e-08!7;UBERON:0003076!2.21e-08!15;UBERON:0003057!2.21e-08!15;UBERON:0004732!3.34e-08!13;UBERON:0000025!1.03e-07!194;UBERON:0000064!6.99e-07!219|ontology_enrichment_uberon_v019=UBERON:0000956;6.62e-23;25!UBERON:0000203;6.62e-23;25!UBERON:0001869;2.14e-22;32!UBERON:0001893;2.63e-20;34!UBERON:0002791;1.21e-19;32!UBERON:0003528;2.82e-19;34!UBERON:0002020;2.82e-19;34!UBERON:0002619;3.85e-18;22!UBERON:0001950;4.43e-16;20!UBERON:0002780;8.14e-16;41!UBERON:0001890;8.14e-16;41!UBERON:0000073;1.71e-13;53!UBERON:0002616;1.71e-13;53!UBERON:0000955;1.28e-12;68!UBERON:0001017;7.49e-11;75!UBERON:0001016;2.70e-08;83!UBERON:0007023;4.01e-08;114!UBERON:0000200;2.39e-07;6!UBERON:0001870;5.58e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.03e-26,68;UBERON:0006238,1.03e-26,68;UBERON:0000073,2.06e-26,53;UBERON:0002616,2.06e-26,53;UBERON:0001017,2.34e-26,81;UBERON:0001049,8.70e-25,56;UBERON:0005068,8.70e-25,56;UBERON:0006241,8.70e-25,56;UBERON:0007135,8.70e-25,56;UBERON:0001869,2.51e-24,32;UBERON:0001016,3.15e-23,89;UBERON:0000956,3.81e-23,25;UBERON:0000203,3.81e-23,25;UBERON:0001893,9.30e-23,34;UBERON:0003528,1.28e-22,34;UBERON:0002020,1.28e-22,34;UBERON:0002780,2.86e-21,41;UBERON:0001890,2.86e-21,41;UBERON:0003080,2.86e-21,41;UBERON:0006240,2.86e-21,41;UBERON:0002791,7.36e-21,32;UBERON:0007023,1.06e-19,114;UBERON:0002619,2.47e-18,22;UBERON:0003075,1.28e-17,82;UBERON:0007284,1.28e-17,82;UBERON:0002346,1.35e-16,86;UBERON:0001950,3.03e-16,20;UBERON:0003056,2.50e-13,61;UBERON:0010371,5.81e-13,104;UBERON:0010314,6.30e-13,132;UBERON:0004121,8.23e-11,171;UBERON:0000924,8.23e-11,171;UBERON:0006601,8.23e-11,171;UBERON:0000200,2.22e-07,6;UBERON:0001870,4.82e-07,3;UBERON:0011216,5.62e-07,223|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0.286235987131057,1.64249310087461,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,1.34171076742555,1.72288698817931,1.04574548582567,0.829288440122964,0.504641701751257,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,2.01452822600355,1.73269949833235,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64409 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16347 | |||
|TSSclassifier=S | |||
|UniProt=Q6IS24 | |||
|association_with_transcript=-235bp_to_ENST00000333538_5end | |||
|coexpression_cluster_id=C1539 | |||
|description=CAGE_peak_4_at_WBSCR17_5end | |||
|id=chr7:70596902..70596919,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.07e-09!6;CL:0000031!9.07e-09!6;CL:0000404!9.07e-09!6;CL:0002322!3.75e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.84e-09;5!CL:0002605;5.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.12e-08,5;CL:0002605,4.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.59e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.33e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.10e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.49e-44!115;UBERON:0001017!1.76e-35!82;UBERON:0000073!3.54e-35!94;UBERON:0001016!3.54e-35!94;UBERON:0005743!1.18e-34!86;UBERON:0001049!4.46e-34!57;UBERON:0005068!4.46e-34!57;UBERON:0006241!4.46e-34!57;UBERON:0007135!4.46e-34!57;UBERON:0002346!3.10e-31!90;UBERON:0002616!1.05e-30!59;UBERON:0000955!6.30e-29!69;UBERON:0006238!6.30e-29!69;UBERON:0001893!1.88e-28!34;UBERON:0003075!7.50e-28!86;UBERON:0007284!7.50e-28!86;UBERON:0002780!1.02e-27!41;UBERON:0001890!1.02e-27!41;UBERON:0006240!1.02e-27!41;UBERON:0002791!4.34e-27!33;UBERON:0003080!8.02e-27!42;UBERON:0001869!9.57e-27!32;UBERON:0002020!2.00e-26!34;UBERON:0003528!2.00e-26!34;UBERON:0000956!2.74e-23!25;UBERON:0000203!2.74e-23!25;UBERON:0000924!1.55e-22!173;UBERON:0006601!1.55e-22!173;UBERON:0004121!5.03e-20!169;UBERON:0002619!1.25e-19!22;UBERON:0000153!2.59e-19!129;UBERON:0007811!2.59e-19!129;UBERON:0003056!6.04e-19!61;UBERON:0001950!2.88e-17!20;UBERON:0000033!3.42e-17!123;UBERON:0000200!4.11e-09!6;UBERON:0004733!4.55e-09!12;UBERON:0002028!4.55e-09!12;UBERON:0007277!4.55e-09!12;UBERON:0000922!1.68e-08!612;UBERON:0000468!1.81e-08!659;UBERON:0001871!2.02e-08!7;UBERON:0003076!2.21e-08!15;UBERON:0003057!2.21e-08!15;UBERON:0004732!3.34e-08!13;UBERON:0000025!1.03e-07!194;UBERON:0000064!6.99e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;6.62e-23;25!UBERON:0000203;6.62e-23;25!UBERON:0001869;2.14e-22;32!UBERON:0001893;2.63e-20;34!UBERON:0002791;1.21e-19;32!UBERON:0003528;2.82e-19;34!UBERON:0002020;2.82e-19;34!UBERON:0002619;3.85e-18;22!UBERON:0001950;4.43e-16;20!UBERON:0002780;8.14e-16;41!UBERON:0001890;8.14e-16;41!UBERON:0000073;1.71e-13;53!UBERON:0002616;1.71e-13;53!UBERON:0000955;1.28e-12;68!UBERON:0001017;7.49e-11;75!UBERON:0001016;2.70e-08;83!UBERON:0007023;4.01e-08;114!UBERON:0000200;2.39e-07;6!UBERON:0001870;5.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.03e-26,68;UBERON:0006238,1.03e-26,68;UBERON:0000073,2.06e-26,53;UBERON:0002616,2.06e-26,53;UBERON:0001017,2.34e-26,81;UBERON:0001049,8.70e-25,56;UBERON:0005068,8.70e-25,56;UBERON:0006241,8.70e-25,56;UBERON:0007135,8.70e-25,56;UBERON:0001869,2.51e-24,32;UBERON:0001016,3.15e-23,89;UBERON:0000956,3.81e-23,25;UBERON:0000203,3.81e-23,25;UBERON:0001893,9.30e-23,34;UBERON:0003528,1.28e-22,34;UBERON:0002020,1.28e-22,34;UBERON:0002780,2.86e-21,41;UBERON:0001890,2.86e-21,41;UBERON:0003080,2.86e-21,41;UBERON:0006240,2.86e-21,41;UBERON:0002791,7.36e-21,32;UBERON:0007023,1.06e-19,114;UBERON:0002619,2.47e-18,22;UBERON:0003075,1.28e-17,82;UBERON:0007284,1.28e-17,82;UBERON:0002346,1.35e-16,86;UBERON:0001950,3.03e-16,20;UBERON:0003056,2.50e-13,61;UBERON:0010371,5.81e-13,104;UBERON:0010314,6.30e-13,132;UBERON:0004121,8.23e-11,171;UBERON:0000924,8.23e-11,171;UBERON:0006601,8.23e-11,171;UBERON:0000200,2.22e-07,6;UBERON:0001870,4.82e-07,3;UBERON:0011216,5.62e-07,223 | |||
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|short_description=p4@WBSCR17 | |||
}} |
Revision as of 01:51, 14 September 2013
Short description: | p4@WBSCR17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_WBSCR17_5end |
Coexpression cluster: | C1539_carcinoid_cerebellum_temporal_neuroectodermal_occipital_insula_postcentral |
Association with transcript: | -235bp_to_ENST00000333538_5end |
EntrezGene: | WBSCR17 |
HGNC: | 16347 |
UniProt: | Q6IS24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.12e-08 | 5 |
astrocyte of the cerebral cortex | 4.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.10e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.