FFCP PHASE1:Mm9::chr5:123465978..123465989,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:123465978..123465989,-|id=chr5:123465978..123465989,-|ontology_enrichment_celltype=CL:0000791!9.76e-38!9;CL:0000789!9.76e-38!9;CL:0002420!9.76e-38!9;CL:0002419!9.76e-38!9;CL:0000790!9.76e-38!9;CL:0000838!1.85e-34!12;CL:0000624!5.83e-34!8;CL:0000542!1.09e-31!13;CL:0000051!1.09e-31!13;CL:0000084!1.22e-30!11;CL:0000827!1.22e-30!11;CL:0000738!9.06e-29!17;CL:0002087!9.06e-29!17;CL:0000988!9.22e-27!32;CL:0002032!9.22e-27!32;CL:0000037!9.22e-27!32;CL:0000566!9.22e-27!32;CL:0000837!9.22e-27!32;CL:0000893!6.48e-26!6;CL:0002489!6.48e-26!6;CL:0000898!6.48e-26!6;CL:0000809!6.48e-26!6;CL:0000810!6.48e-26!6;CL:0000895!6.48e-26!6;CL:0000808!6.48e-26!6;CL:0000894!6.48e-26!6;CL:0000806!6.48e-26!6;CL:0000807!6.48e-26!6;CL:0000805!6.48e-26!6;CL:0002425!6.48e-26!6;CL:0002436!6.48e-26!6;CL:0002427!6.48e-26!6;CL:0002428!6.48e-26!6;CL:0002429!6.48e-26!6;CL:0002433!6.48e-26!6;CL:0002431!6.48e-26!6;CL:0002432!6.48e-26!6;CL:0002031!1.59e-22!25;CL:0000063!1.72e-19!66;CL:0002320!7.94e-18!46;CL:0000134!7.94e-18!46;CL:0000219!6.69e-17!54;CL:0000144!3.69e-13!121;CL:0000012!3.69e-13!121;CL:0000548!4.34e-11!115;CL:0000004!4.34e-11!115;CL:0000255!4.34e-11!115;CL:0000034!8.40e-11!97;CL:0002371!1.01e-10!118;CL:0000723!6.75e-09!91;CL:0000048!6.75e-09!91|ontology_enrichment_celltype_v019_2=CL:0000624,1.32e-86,8;CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000893,2.25e-65,6;CL:0002489,2.25e-65,6;CL:0000898,2.25e-65,6;CL:0000809,2.25e-65,6;CL:0000810,2.25e-65,6;CL:0000895,2.25e-65,6;CL:0000808,2.25e-65,6;CL:0000894,2.25e-65,6;CL:0000806,2.25e-65,6;CL:0000807,2.25e-65,6;CL:0000805,2.25e-65,6;CL:0002425,2.25e-65,6;CL:0002436,2.25e-65,6;CL:0002427,2.25e-65,6;CL:0002428,2.25e-65,6;CL:0002429,2.25e-65,6;CL:0002433,2.25e-65,6;CL:0002431,2.25e-65,6;CL:0002432,2.25e-65,6;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,2.59e-12,1;CL:0000792,2.59e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.94e-18!46;UBERON:0000072!4.48e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.84e-17,23;UBERON:0000974,2.84e-17,23;UBERON:0004807,2.84e-17,23;UBERON:0005058,2.84e-17,23;UBERON:0003351,2.84e-17,23;UBERON:0009113,2.84e-17,23;UBERON:0003295,2.84e-17,23;UBERON:0009722,2.84e-17,23;UBERON:0005562,2.84e-17,23;UBERON:0007690,2.84e-17,23;UBERON:0006562,1.46e-16,24;UBERON:0003408,1.46e-16,24;UBERON:0001557,1.46e-16,24;UBERON:0001042,1.46e-16,24;UBERON:0008814,1.46e-16,24;UBERON:0009145,1.46e-16,24;UBERON:0002384,3.33e-15,46;UBERON:0000072,9.75e-15,27;UBERON:0004177,9.92e-14,29;UBERON:0005057,9.92e-14,29;UBERON:0000077,2.16e-11,35;UBERON:0007811,4.45e-11,36;UBERON:0000065,9.85e-10,41;UBERON:0001004,1.68e-09,42;UBERON:0000153,2.78e-09,43;UBERON:0002390,7.19e-09,45;UBERON:0003061,7.19e-09,45;UBERON:0002193,2.57e-08,48;UBERON:0002405,2.57e-08,48;UBERON:0003929,2.97e-07,55|phase1_expression=0,0,0,0,0,0.16787927191189,0,3.35720640948098,14.36044965947,15.2141942109296,3.76679530096111,2.07407613387875,1.71200729931206,1.22388563386596,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:123465978..123465989,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:123465978..123465989,- | |||
|id=chr5:123465978..123465989,- | |||
|ontology_enrichment_celltype=CL:0000791!9.76e-38!9;CL:0000789!9.76e-38!9;CL:0002420!9.76e-38!9;CL:0002419!9.76e-38!9;CL:0000790!9.76e-38!9;CL:0000838!1.85e-34!12;CL:0000624!5.83e-34!8;CL:0000542!1.09e-31!13;CL:0000051!1.09e-31!13;CL:0000084!1.22e-30!11;CL:0000827!1.22e-30!11;CL:0000738!9.06e-29!17;CL:0002087!9.06e-29!17;CL:0000988!9.22e-27!32;CL:0002032!9.22e-27!32;CL:0000037!9.22e-27!32;CL:0000566!9.22e-27!32;CL:0000837!9.22e-27!32;CL:0000893!6.48e-26!6;CL:0002489!6.48e-26!6;CL:0000898!6.48e-26!6;CL:0000809!6.48e-26!6;CL:0000810!6.48e-26!6;CL:0000895!6.48e-26!6;CL:0000808!6.48e-26!6;CL:0000894!6.48e-26!6;CL:0000806!6.48e-26!6;CL:0000807!6.48e-26!6;CL:0000805!6.48e-26!6;CL:0002425!6.48e-26!6;CL:0002436!6.48e-26!6;CL:0002427!6.48e-26!6;CL:0002428!6.48e-26!6;CL:0002429!6.48e-26!6;CL:0002433!6.48e-26!6;CL:0002431!6.48e-26!6;CL:0002432!6.48e-26!6;CL:0002031!1.59e-22!25;CL:0000063!1.72e-19!66;CL:0002320!7.94e-18!46;CL:0000134!7.94e-18!46;CL:0000219!6.69e-17!54;CL:0000144!3.69e-13!121;CL:0000012!3.69e-13!121;CL:0000548!4.34e-11!115;CL:0000004!4.34e-11!115;CL:0000255!4.34e-11!115;CL:0000034!8.40e-11!97;CL:0002371!1.01e-10!118;CL:0000723!6.75e-09!91;CL:0000048!6.75e-09!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.32e-86,8;CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000893,2.25e-65,6;CL:0002489,2.25e-65,6;CL:0000898,2.25e-65,6;CL:0000809,2.25e-65,6;CL:0000810,2.25e-65,6;CL:0000895,2.25e-65,6;CL:0000808,2.25e-65,6;CL:0000894,2.25e-65,6;CL:0000806,2.25e-65,6;CL:0000807,2.25e-65,6;CL:0000805,2.25e-65,6;CL:0002425,2.25e-65,6;CL:0002436,2.25e-65,6;CL:0002427,2.25e-65,6;CL:0002428,2.25e-65,6;CL:0002429,2.25e-65,6;CL:0002433,2.25e-65,6;CL:0002431,2.25e-65,6;CL:0002432,2.25e-65,6;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,2.59e-12,1;CL:0000792,2.59e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.94e-18!46;UBERON:0000072!4.48e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.84e-17,23;UBERON:0000974,2.84e-17,23;UBERON:0004807,2.84e-17,23;UBERON:0005058,2.84e-17,23;UBERON:0003351,2.84e-17,23;UBERON:0009113,2.84e-17,23;UBERON:0003295,2.84e-17,23;UBERON:0009722,2.84e-17,23;UBERON:0005562,2.84e-17,23;UBERON:0007690,2.84e-17,23;UBERON:0006562,1.46e-16,24;UBERON:0003408,1.46e-16,24;UBERON:0001557,1.46e-16,24;UBERON:0001042,1.46e-16,24;UBERON:0008814,1.46e-16,24;UBERON:0009145,1.46e-16,24;UBERON:0002384,3.33e-15,46;UBERON:0000072,9.75e-15,27;UBERON:0004177,9.92e-14,29;UBERON:0005057,9.92e-14,29;UBERON:0000077,2.16e-11,35;UBERON:0007811,4.45e-11,36;UBERON:0000065,9.85e-10,41;UBERON:0001004,1.68e-09,42;UBERON:0000153,2.78e-09,43;UBERON:0002390,7.19e-09,45;UBERON:0003061,7.19e-09,45;UBERON:0002193,2.57e-08,48;UBERON:0002405,2.57e-08,48;UBERON:0003929,2.97e-07,55 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,3.35720640948098,14.36044965947,15.2141942109296,3.76679530096111,2.07407613387875,1.71200729931206,1.22388563386596,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.559805809294632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:123465978..123465989,- | |||
}} |
Revision as of 06:22, 14 September 2013
Short description: | p@chr5:123465978..123465989, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:123465978..123465989, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.84e-17 | 23 |
neck | 2.84e-17 | 23 |
respiratory system epithelium | 2.84e-17 | 23 |
hemolymphoid system gland | 2.84e-17 | 23 |
pharyngeal epithelium | 2.84e-17 | 23 |
thymic region | 2.84e-17 | 23 |
pharyngeal gland | 2.84e-17 | 23 |
entire pharyngeal arch endoderm | 2.84e-17 | 23 |
thymus primordium | 2.84e-17 | 23 |
early pharyngeal endoderm | 2.84e-17 | 23 |
pharynx | 1.46e-16 | 24 |
gland of gut | 1.46e-16 | 24 |
upper respiratory tract | 1.46e-16 | 24 |
chordate pharynx | 1.46e-16 | 24 |
pharyngeal arch system | 1.46e-16 | 24 |
pharyngeal region of foregut | 1.46e-16 | 24 |
connective tissue | 3.33e-15 | 46 |
segment of respiratory tract | 9.75e-15 | 27 |
hemopoietic organ | 9.92e-14 | 29 |
immune organ | 9.92e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 2.16e-11 | 35 |
craniocervical region | 4.45e-11 | 36 |
respiratory tract | 9.85e-10 | 41 |
respiratory system | 1.68e-09 | 42 |
anterior region of body | 2.78e-09 | 43 |
hematopoietic system | 7.19e-09 | 45 |
blood island | 7.19e-09 | 45 |
hemolymphoid system | 2.57e-08 | 48 |
immune system | 2.57e-08 | 48 |
gut epithelium | 2.97e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.