FFCP PHASE1:Hg19::chr9:118916082..118916108,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |||
|TSSclassifier=S | |||
|UniProt=Q13219 | |||
|association_with_transcript=0bp_to_ENST00000328252_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_PAPPA_5end | |||
|id=chr9:118916082..118916108,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.06e-37!180;CL:0000187!1.25e-25!54;CL:0000680!2.91e-25!57;CL:0000056!2.91e-25!57;CL:0000355!2.91e-25!57;CL:0000183!1.91e-23!59;CL:0000393!2.17e-22!60;CL:0000211!2.17e-22!60;CL:0000192!3.47e-22!42;CL:0000514!3.47e-22!42;CL:0000057!1.68e-21!75;CL:0000359!8.77e-20!32;CL:0000222!3.83e-11!119;CL:0002494!1.79e-10!16;CL:0002539!6.57e-08!10;CL:0002620!2.14e-07!23;CL:0002334!7.39e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.63e-22;32!CL:0000192;1.77e-18;43!CL:0000187;1.21e-16;55!CL:0000393;3.64e-13;61!CL:0000211;3.64e-13;61!CL:0002494;1.62e-12;16!CL:0002539;2.16e-09;10!CL:0000134;3.76e-09;55!CL:0000057;5.61e-09;73!CL:0000723;2.76e-08;61!CL:0002334;4.37e-08;12!CL:0000349;1.54e-07;19!CL:0000048;2.19e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,5.22e-30,55;CL:0000680,2.82e-28,58;CL:0000056,2.82e-28,58;CL:0000355,2.82e-28,58;CL:0000192,1.84e-25,43;CL:0000514,1.84e-25,43;CL:0000393,6.18e-25,61;CL:0000211,6.18e-25,61;CL:0000359,5.63e-24,32;CL:0000057,1.75e-22,76;CL:0000048,5.70e-13,427;CL:0002494,1.61e-12,16;CL:0000222,1.87e-12,121;CL:0000723,4.09e-12,433;CL:0000034,4.96e-11,441;CL:0002539,2.28e-09,10;CL:0002334,4.43e-08,12;CL:0000349,1.63e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-18;43!CL:0000355;1.72e-15;58 | |||
|ontology_enrichment_disease=DOID:2394!6.43e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.37e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.91e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.11e-25!83;UBERON:0002329!4.11e-25!83;UBERON:0003077!4.11e-25!83;UBERON:0003059!4.11e-25!83;UBERON:0007282!4.11e-25!83;UBERON:0009618!4.11e-25!83;UBERON:0007285!4.11e-25!83;UBERON:0004290!1.68e-24!70;UBERON:0002385!3.10e-23!63;UBERON:0001015!3.10e-23!63;UBERON:0000383!3.10e-23!63;UBERON:0001134!3.46e-23!61;UBERON:0002036!3.46e-23!61;UBERON:0003082!3.46e-23!61;UBERON:0000486!4.03e-22!82;UBERON:0004872!6.50e-16!84;UBERON:0005256!7.36e-16!143;UBERON:0001637!6.21e-13!42;UBERON:0003509!6.21e-13!42;UBERON:0004572!6.21e-13!42;UBERON:0002049!2.19e-12!79;UBERON:0007798!2.19e-12!79;UBERON:0004573!4.28e-12!33;UBERON:0004571!4.28e-12!33;UBERON:0002100!6.31e-12!216;UBERON:0004535!3.14e-11!110;UBERON:0001009!5.19e-11!113;UBERON:0000481!5.91e-11!347;UBERON:0000948!4.46e-10!24;UBERON:0005498!4.46e-10!24;UBERON:0004140!4.46e-10!24;UBERON:0009881!4.46e-10!24;UBERON:0004141!4.46e-10!24;UBERON:0003084!4.46e-10!24;UBERON:0007005!4.46e-10!24;UBERON:0004139!4.46e-10!24;UBERON:0004291!4.46e-10!24;UBERON:0001981!7.79e-10!60;UBERON:0007500!7.79e-10!60;UBERON:0004537!7.79e-10!60;UBERON:0006965!7.79e-10!60;UBERON:0000475!1.01e-09!365;UBERON:0003104!1.29e-09!238;UBERON:0009142!1.29e-09!238;UBERON:0000490!1.95e-09!138;UBERON:0001135!3.21e-09!15;UBERON:0007100!3.61e-09!27;UBERON:0003914!4.19e-09!118;UBERON:0000055!3.10e-08!69;UBERON:0004237!6.57e-08!10;UBERON:0004695!6.57e-08!10;UBERON:0002111!6.57e-08!10;UBERON:0004178!6.57e-08!10;UBERON:0000468!9.37e-08!659;UBERON:0004923!4.19e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.37e-14;33!UBERON:0004571;5.37e-14;33!UBERON:0001637;1.29e-11;42!UBERON:0003509;1.29e-11;42!UBERON:0004572;1.29e-11;42!UBERON:0000948;1.47e-10;22!UBERON:0001135;3.76e-10;15!UBERON:0004237;2.16e-09;10!UBERON:0004695;2.16e-09;10!UBERON:0002111;2.16e-09;10!UBERON:0004178;2.16e-09;10!UBERON:0007100;1.82e-08;25!UBERON:0002385;1.95e-08;31!UBERON:0001015;1.95e-08;31!UBERON:0000383;1.95e-08;31!UBERON:0000947;2.81e-07;21!UBERON:0010191;2.81e-07;21!UBERON:0006876;3.52e-07;11!UBERON:0000478;8.38e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.70e-25,62;UBERON:0002036,4.70e-25,62;UBERON:0003082,4.70e-25,62;UBERON:0002329,1.16e-24,71;UBERON:0003059,1.16e-24,71;UBERON:0007282,1.16e-24,71;UBERON:0004290,1.16e-24,71;UBERON:0009618,1.16e-24,71;UBERON:0002385,1.55e-24,64;UBERON:0001015,1.55e-24,64;UBERON:0000383,1.55e-24,64;UBERON:0007524,3.34e-24,73;UBERON:0003077,5.30e-24,72;UBERON:0007285,5.30e-24,72;UBERON:0007503,3.95e-21,78;UBERON:0000486,5.26e-21,83;UBERON:0004872,3.02e-19,83;UBERON:0001637,3.70e-17,42;UBERON:0003509,3.70e-17,42;UBERON:0004572,3.70e-17,42;UBERON:0005256,3.65e-16,122;UBERON:0004573,1.14e-15,33;UBERON:0004571,1.14e-15,33;UBERON:0004535,1.17e-15,109;UBERON:0003104,1.53e-15,160;UBERON:0009142,1.53e-15,160;UBERON:0002049,2.45e-15,78;UBERON:0007798,2.45e-15,78;UBERON:0001009,1.23e-14,112;UBERON:0007500,1.38e-12,59;UBERON:0001981,1.38e-12,59;UBERON:0004537,1.38e-12,59;UBERON:0006965,1.38e-12,59;UBERON:0003914,7.20e-12,117;UBERON:0000490,7.48e-12,148;UBERON:0000948,1.35e-11,24;UBERON:0005498,1.35e-11,24;UBERON:0004140,1.35e-11,24;UBERON:0009881,1.35e-11,24;UBERON:0004141,1.35e-11,24;UBERON:0003084,1.35e-11,24;UBERON:0007005,1.35e-11,24;UBERON:0004139,1.35e-11,24;UBERON:0004291,1.35e-11,24;UBERON:0000055,2.97e-10,68;UBERON:0001135,3.40e-10,15;UBERON:0002100,4.72e-10,199;UBERON:0007100,1.90e-09,27;UBERON:0004237,2.28e-09,10;UBERON:0004695,2.28e-09,10;UBERON:0002111,2.28e-09,10;UBERON:0004178,2.28e-09,10;UBERON:0000926,6.90e-08,315;UBERON:0004120,6.90e-08,315;UBERON:0006603,6.90e-08,315;UBERON:0000947,3.02e-07,21;UBERON:0010191,3.02e-07,21;UBERON:0006876,3.86e-07,11;UBERON:0000478,8.80e-07,24 | |||
|phase1_expression=5.26867299884614,4.49611100171065,8.3163098416623,0,1.78784437770915,1.74467704820074,0,3.15859936713415,0.522371256399677,3.68600904752263,0.697801167972428,31.4555575867448,25.8491638663884,0.990130823680373,3.31397375727916,56.4753123019491,43.9967005457503,38.7064347905308,34.643228714126,0,0,0.313454721478088,1.71741592278634,2.18999080116615,2.88748071068046,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,16.0968206328873,3.70801429346238,4.3372698286148,18.5495026935279,5.79386075843295,0,3.40644409211845,8.79173799625831,11.0864698731282,14.8440787821383,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,15.3222919114142,57.7304028345634,28.1099888333837,7.80270440836386,7.28880880184999,43.767088249179,22.6934144543787,7.46906484959439,34.2165107057008,17.4904236331401,11.5031645010148,15.55674996096,3.04617861383936,2.49728061464256,1.71141546463335,0.747243402759005,0.704606991862589,1.13311061057692,0.561803226808994,1.22492502752936,0.122834317311768,2.27316718586684,3.56400857184616,15.083282685992,0,3.59309070908119,0,0.500474079487857,0.831192346452549,0.877955241761676,2.45190236639216,6.30999847407706,25.4088090278447,5.202299434977,11.3185416073841,6.14602513362729,1.80054657650641,6.90451945897541,2.83404594050192,0.930584281657949,8.27004027982204,4.18979122193154,10.0973509697646,13.7154348977026,3.55621325001386,8.16522062788213,2.21654616100809,3.05209066158878,0.57978255948989,0.545492241181669,2.58124135850103,0.243947412259191,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0,9.38697193978896,3.85944562915731,1.38134921352481,6.96551892047969,5.0531563716871,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,5.60967095213783,4.9388881359768,4.41026134156626,0,0,2.95394953340702,0,0,14.5832638753747,0.878002283269004,0,0,0,4.56131627434455,2.07986957055916,7.21656710126366,1.97081688457631,54.5950428196571,1.15493158208859,0.462985512576611,0.380508304469197,0,0,0,0,0,0.93733833986777,3.86358894857377,9.07360622351273,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.2933531432838,10.0831938291067,0,1.690605505112,3.19125739901845,3.12022310734098,0,0,0,6.71996570193294,0.542621605391443,6.58592269424615,0.325736184293735,6.39705507736582,13.4631818398683,13.866211344741,14.816068796205,14.09619175667,0,0,0,6.70949595376431,6.89171615004683,0,0.434343920002738,0.205476322550383,1.25342674267927,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,9.56993635409291,2.00068208423871,1.08506009479894,28.9079497527822,39.2543775353756,24.7592791603277,18.2740607388633,2.10662269809403,0,2.0694614258501,0,1.29058417979192,2.69339204851057,0.783204629850962,0,0,0,0,0.303127571446259,4.99306318531491,5.44302527993425,12.4053903909388,23.6331438863616,17.4009258548506,23.9620209108161,2.04682899626681,8.68611174175481,2.96836132889982,4.1636617326717,4.26148140751505,6.98080826117378,24.9242126008138,8.25093687065711,0,0.601519410909855,0,11.9407026091191,3.82391452814106,4.19598127870157,0,0,0,0,0.633309773357254,0,0,1.0795795805107,0,0.270946437543853,0.501689773854853,0,0,0,0.219259876645935,0,0,1.31205858279882,1.30151357865721,556.215380874405,0,0,5.74265537996172,0,8.03419649220798,7.73365746336976,4.62145851343933,3.68408819342711,3.58375088459779,16.4352974648459,11.0212687374814,9.6306088980194,1.33548053470106,0,0,0,0.10115778085555,3.253918845081,84.6845212974422,17.425931754015,31.7274587581371,18.6307110610958,12.179061889051,33.9143320960174,38.9299691938216,1.116475108079,6.96034734381197,13.1534833807439,1.02359116524534,3.85145089230528,19.7286013714081,15.6989728039846,7.01502584574927,13.4523144570667,16.9649859377788,19.0051532678917,11.0957224821106,38.3345195177473,1.46290121726877,18.034798232715,5.28250733783777,3.13949796238367,11.0296236923896,2.26016233240486,35.2873819869519,45.1138503164029,22.7994460331957,5.20897980840019,0.655894752046633,44.0315518009068,14.5617044106883,6.47899885824155,7.88762437122283,7.17217999395784,44.5838814351563,0.709522128141196,1.05553817648832,4.61012850143863,2.27683904259429,3.49934720244983,0,0,0,570.982151711166,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,5.77487913158015,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,0.293016358543788,0,0,0,59.9248656691602,0.593929361665277,0,0,0,1.11308705022906,0,0,2.19172787076177,1.93398740871803,0,1.22722419002586,0,8.08702927920699,0,0,0,3.05794557474494,0,2.22273980289274,0,0,0,0,0,0.724999575434793,0,0,0,0,3.79085997398231,0,0,0,0,0,0,0,0,0,1.76985594558733,1.93701494939902,0,0,0,217.558790937169,99.108596060815,386.45021261351,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0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| |||
|short_description=p1@PAPPA | |||
}} |
Revision as of 07:10, 14 September 2013
Short description: | p1@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PAPPA_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000328252_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 5.22e-30 | 55 |
muscle precursor cell | 2.82e-28 | 58 |
myoblast | 2.82e-28 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-28 | 58 |
smooth muscle cell | 1.84e-25 | 43 |
smooth muscle myoblast | 1.84e-25 | 43 |
electrically responsive cell | 6.18e-25 | 61 |
electrically active cell | 6.18e-25 | 61 |
vascular associated smooth muscle cell | 5.63e-24 | 32 |
fibroblast | 1.75e-22 | 76 |
multi fate stem cell | 5.70e-13 | 427 |
cardiocyte | 1.61e-12 | 16 |
mesodermal cell | 1.87e-12 | 121 |
somatic stem cell | 4.09e-12 | 433 |
stem cell | 4.96e-11 | 441 |
aortic smooth muscle cell | 2.28e-09 | 10 |
preadipocyte | 4.43e-08 | 12 |
extraembryonic cell | 1.63e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.91e-09 | 14 |
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