FFCP PHASE1:Mm9::chr5:34064418..34064449,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14184|HGNC=|UniProt=|association_with_transcript=9bp_to_uc008xbg.2_5end|description=CAGE_peak_1_at_Fgfr3_5end|id=chr5:34064418..34064449,+|ontology_enrichment_celltype=CL:0000117!1.74e-10!23;CL:0000337!1.74e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-10,23;CL:0000337,1.16e-10,23;CL:0000221,5.55e-07,44;CL:0000133,5.55e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.54e-13!52;UBERON:0005068!1.54e-13!52;UBERON:0006241!1.54e-13!52;UBERON:0007135!1.54e-13!52;UBERON:0002020!5.60e-13!34;UBERON:0000955!2.26e-12!50;UBERON:0006238!2.26e-12!50;UBERON:0001017!3.33e-12!73;UBERON:0005743!3.33e-12!73;UBERON:0000033!3.50e-12!63;UBERON:0002616!5.96e-12!49;UBERON:0000073!5.95e-11!75;UBERON:0001016!5.95e-11!75;UBERON:0002791!4.67e-10!29;UBERON:0003528!4.67e-10!29;UBERON:0001893!4.67e-10!29;UBERON:0004121!1.67e-09!102;UBERON:0000924!1.67e-09!102;UBERON:0006601!1.67e-09!102;UBERON:0004111!2.84e-09!122;UBERON:0000025!6.64e-09!114;UBERON:0003076!5.18e-08!12;UBERON:0003057!5.18e-08!12;UBERON:0002346!9.14e-08!71;UBERON:0003075!9.14e-08!71;UBERON:0007284!9.14e-08!71;UBERON:0000475!1.09e-07!200;UBERON:0003080!1.38e-07!40;UBERON:0002048!2.63e-07!14;UBERON:0000117!2.63e-07!14;UBERON:0000171!2.63e-07!14;UBERON:0000170!2.63e-07!14;UBERON:0005597!2.63e-07!14;UBERON:0000118!2.63e-07!14;UBERON:0002780!3.66e-07!39;UBERON:0001890!3.66e-07!39;UBERON:0006240!3.66e-07!39;UBERON:0000468!4.80e-07!333;UBERON:0003056!5.23e-07!49;UBERON:0000956!5.42e-07!21;UBERON:0001869!5.42e-07!21;UBERON:0000203!5.42e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.63e-14,54;UBERON:0001049,2.95e-13,52;UBERON:0005068,2.95e-13,52;UBERON:0006241,2.95e-13,52;UBERON:0007135,2.95e-13,52;UBERON:0002020,3.35e-13,34;UBERON:0001017,2.10e-12,73;UBERON:0004121,5.65e-12,95;UBERON:0000924,5.65e-12,95;UBERON:0006601,5.65e-12,95;UBERON:0010371,6.41e-12,73;UBERON:0001016,3.17e-11,75;UBERON:0002346,1.98e-10,64;UBERON:0003075,1.98e-10,64;UBERON:0007284,1.98e-10,64;UBERON:0000955,2.41e-10,47;UBERON:0006238,2.41e-10,47;UBERON:0003528,3.19e-10,29;UBERON:0002791,3.19e-10,29;UBERON:0001893,3.19e-10,29;UBERON:0002616,6.13e-10,46;UBERON:0004111,1.66e-08,122;UBERON:0011216,1.84e-08,194;UBERON:0000025,2.53e-08,114;UBERON:0003076,3.87e-08,12;UBERON:0003057,3.87e-08,12;UBERON:0002048,2.03e-07,14;UBERON:0000117,2.03e-07,14;UBERON:0000171,2.03e-07,14;UBERON:0000170,2.03e-07,14;UBERON:0005597,2.03e-07,14;UBERON:0000118,2.03e-07,14;UBERON:0003080,2.72e-07,40;UBERON:0000956,4.24e-07,21;UBERON:0001869,4.24e-07,21;UBERON:0000203,4.24e-07,21;UBERON:0002780,7.20e-07,39;UBERON:0001890,7.20e-07,39;UBERON:0006240,7.20e-07,39;UBERON:0003056,9.38e-07,49|phase1_expression=12.1713123799643,5.93258192986914,6.3699893514535,12.7034968748869,18.5331420080148,14.6054966563344,9.34450562382103,0.129123323441576,1.54867594366833,1.40438715793196,0,0,0,0.0874204024189974,0.999329285446988,0.404950534779652,0,0.157731082679119,0,0,13.9470995847754,0,0,2.23989391910769,3.67054849707472,7.46501553349526,4.73838195774982,4.74036711908956,4.18051522804023,7.05684363327806,3.99114919179548,0,0,0,6.64358725427932,6.31691652362271,11.0251452381679,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,18.7773922643529,37.2823017410564,33.6119859583742,19.2485600083541,16.0984384869167,57.5010257459886,0,0.725362142011344,0.672187598284928,0,0,0,7.68802551266472,11.6378015439847,10.1413024560989,3.04960078862219,6.22506357277798,0,0.988866362566974,0,19.7736072942147,36.5007390055477,20.6342328493871,12.0155285115205,14.5124223332454,59.9867067247988,48.1493419274518,4.89963196859816,9.39285615978716,5.51531271966013,48.450987639731,41.498384877686,40.398518246392,10.2871304429551,11.7104183811084,12.5019208933622,43.273364845214,41.0816705323126,46.2978690763735,35.3554302568401,32.0336281797982,18.2671456908795,0.075726193333184,0,50.1465565453903,7.74381489283248,5.439770669662,13.4925797909454,9.09686984426737,5.82434953226536,6.88177658645584,0,0,0,25.7743458191325,2.56652954828636,20.3844191765317,0,0.865964164044856,0.253359865475099,0.505524445014783,4.22480354960522,0,0.890652834388949,0.520455980298408,0.304465478312141,0.461230994512117,1.80867168663147,0.705532242814229,0.628332956648377,4.6967043869531,0.722996784599558,3.5384422077995,15.8531512948461,7.28777010919299,7.75800405016355,0,12.0040126774734,16.127396424636,2.29911349687732,0,0,0,21.7196427136993,16.4700217014706,5.6544458450789,12.8629996942285,21.7358138730781,21.4021685896347,26.4453258800445,0.407357455401265,7.58882520721567,3.79084137650512,2.10441855886474,1.56144531555244,5.0578462975364,5.58192602396583,4.67184935290717,9.45707338203457,3.84341160854549,5.90320864726292,3.3631438196072,4.095791865724,6.61871280587367,10.381116325673,13.1517439456545,6.95118123063995,16.3678518265418,12.5527103208846,1.79130840136644,0,0,0.284163499395593,1.03562886267751,1.64168241986767,1.08037236876609,1.42046841351126,0.787056926989615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| ||
|EntrezGene=14184 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=9bp_to_uc008xbg.2_5end | |||
|description=CAGE_peak_1_at_Fgfr3_5end | |||
|id=chr5:34064418..34064449,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.74e-10!23;CL:0000337!1.74e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-10,23;CL:0000337,1.16e-10,23;CL:0000221,5.55e-07,44;CL:0000133,5.55e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.54e-13!52;UBERON:0005068!1.54e-13!52;UBERON:0006241!1.54e-13!52;UBERON:0007135!1.54e-13!52;UBERON:0002020!5.60e-13!34;UBERON:0000955!2.26e-12!50;UBERON:0006238!2.26e-12!50;UBERON:0001017!3.33e-12!73;UBERON:0005743!3.33e-12!73;UBERON:0000033!3.50e-12!63;UBERON:0002616!5.96e-12!49;UBERON:0000073!5.95e-11!75;UBERON:0001016!5.95e-11!75;UBERON:0002791!4.67e-10!29;UBERON:0003528!4.67e-10!29;UBERON:0001893!4.67e-10!29;UBERON:0004121!1.67e-09!102;UBERON:0000924!1.67e-09!102;UBERON:0006601!1.67e-09!102;UBERON:0004111!2.84e-09!122;UBERON:0000025!6.64e-09!114;UBERON:0003076!5.18e-08!12;UBERON:0003057!5.18e-08!12;UBERON:0002346!9.14e-08!71;UBERON:0003075!9.14e-08!71;UBERON:0007284!9.14e-08!71;UBERON:0000475!1.09e-07!200;UBERON:0003080!1.38e-07!40;UBERON:0002048!2.63e-07!14;UBERON:0000117!2.63e-07!14;UBERON:0000171!2.63e-07!14;UBERON:0000170!2.63e-07!14;UBERON:0005597!2.63e-07!14;UBERON:0000118!2.63e-07!14;UBERON:0002780!3.66e-07!39;UBERON:0001890!3.66e-07!39;UBERON:0006240!3.66e-07!39;UBERON:0000468!4.80e-07!333;UBERON:0003056!5.23e-07!49;UBERON:0000956!5.42e-07!21;UBERON:0001869!5.42e-07!21;UBERON:0000203!5.42e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.63e-14,54;UBERON:0001049,2.95e-13,52;UBERON:0005068,2.95e-13,52;UBERON:0006241,2.95e-13,52;UBERON:0007135,2.95e-13,52;UBERON:0002020,3.35e-13,34;UBERON:0001017,2.10e-12,73;UBERON:0004121,5.65e-12,95;UBERON:0000924,5.65e-12,95;UBERON:0006601,5.65e-12,95;UBERON:0010371,6.41e-12,73;UBERON:0001016,3.17e-11,75;UBERON:0002346,1.98e-10,64;UBERON:0003075,1.98e-10,64;UBERON:0007284,1.98e-10,64;UBERON:0000955,2.41e-10,47;UBERON:0006238,2.41e-10,47;UBERON:0003528,3.19e-10,29;UBERON:0002791,3.19e-10,29;UBERON:0001893,3.19e-10,29;UBERON:0002616,6.13e-10,46;UBERON:0004111,1.66e-08,122;UBERON:0011216,1.84e-08,194;UBERON:0000025,2.53e-08,114;UBERON:0003076,3.87e-08,12;UBERON:0003057,3.87e-08,12;UBERON:0002048,2.03e-07,14;UBERON:0000117,2.03e-07,14;UBERON:0000171,2.03e-07,14;UBERON:0000170,2.03e-07,14;UBERON:0005597,2.03e-07,14;UBERON:0000118,2.03e-07,14;UBERON:0003080,2.72e-07,40;UBERON:0000956,4.24e-07,21;UBERON:0001869,4.24e-07,21;UBERON:0000203,4.24e-07,21;UBERON:0002780,7.20e-07,39;UBERON:0001890,7.20e-07,39;UBERON:0006240,7.20e-07,39;UBERON:0003056,9.38e-07,49 | |||
|phase1_expression=12.1713123799643,5.93258192986914,6.3699893514535,12.7034968748869,18.5331420080148,14.6054966563344,9.34450562382103,0.129123323441576,1.54867594366833,1.40438715793196,0,0,0,0.0874204024189974,0.999329285446988,0.404950534779652,0,0.157731082679119,0,0,13.9470995847754,0,0,2.23989391910769,3.67054849707472,7.46501553349526,4.73838195774982,4.74036711908956,4.18051522804023,7.05684363327806,3.99114919179548,0,0,0,6.64358725427932,6.31691652362271,11.0251452381679,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,18.7773922643529,37.2823017410564,33.6119859583742,19.2485600083541,16.0984384869167,57.5010257459886,0,0.725362142011344,0.672187598284928,0,0,0,7.68802551266472,11.6378015439847,10.1413024560989,3.04960078862219,6.22506357277798,0,0.988866362566974,0,19.7736072942147,36.5007390055477,20.6342328493871,12.0155285115205,14.5124223332454,59.9867067247988,48.1493419274518,4.89963196859816,9.39285615978716,5.51531271966013,48.450987639731,41.498384877686,40.398518246392,10.2871304429551,11.7104183811084,12.5019208933622,43.273364845214,41.0816705323126,46.2978690763735,35.3554302568401,32.0336281797982,18.2671456908795,0.075726193333184,0,50.1465565453903,7.74381489283248,5.439770669662,13.4925797909454,9.09686984426737,5.82434953226536,6.88177658645584,0,0,0,25.7743458191325,2.56652954828636,20.3844191765317,0,0.865964164044856,0.253359865475099,0.505524445014783,4.22480354960522,0,0.890652834388949,0.520455980298408,0.304465478312141,0.461230994512117,1.80867168663147,0.705532242814229,0.628332956648377,4.6967043869531,0.722996784599558,3.5384422077995,15.8531512948461,7.28777010919299,7.75800405016355,0,12.0040126774734,16.127396424636,2.29911349687732,0,0,0,21.7196427136993,16.4700217014706,5.6544458450789,12.8629996942285,21.7358138730781,21.4021685896347,26.4453258800445,0.407357455401265,7.58882520721567,3.79084137650512,2.10441855886474,1.56144531555244,5.0578462975364,5.58192602396583,4.67184935290717,9.45707338203457,3.84341160854549,5.90320864726292,3.3631438196072,4.095791865724,6.61871280587367,10.381116325673,13.1517439456545,6.95118123063995,16.3678518265418,12.5527103208846,1.79130840136644,0,0,0.284163499395593,1.03562886267751,1.64168241986767,1.08037236876609,1.42046841351126,0.787056926989615,0.925602677324269,0.930135779001631,2.41446061259657,2.33530684734339,1.97471819896177,1.47750717671186,2.75633952455909,3.94739966048397,1.75640092232841,2.68412837520744,13.6688466566683,7.61494131606705,3.63460661282178,1.85115396664481,1.49301775374664,2.78684006232526,3.47942145569652,2.21851877085677,3.33567065767305,2.28270751335071,5.21981967698963,2.30578536613615,2.76468729680296,2.58643413653496,3.8992817423824,2.69645822596266,4.10662294761919,5.77509692437665,1.51734320762465,2.28497025219458,2.25415471346161,2.8511185898344,5.43066964069352,4.9095073923223,10.3707920883782,9.74226976665374,4.70996183524124,7.03363834354263,14.5261787272703,1.50160595144485,0.786235980452812,1.57403478669398,0.405720242777006,2.41177159752417,3.56476192493988,4.89083433666378,1.94562272130042,1.64736847912849,0,2.97712758134803,4.05648975048929,2.52578877947112,4.30553792452589,6.75420929908714,25.4959402429914,3.60033682363921,10.4297584922897,7.97801903143384,14.7854856421756,31.1561638841777,35.23045885113,62.4427673144956,27.5861502185834,25.6899039992579,31.412589425525,23.5963173190663,21.9309926969687,31.2441966536065,0,0,0.983528546038072,0.275936746304732,27.6147014779002,40.3208201877179,0,3.02965112645248,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0.395287777946524,15.4234231882467,1.56134093729095,1.6025904330053,1.46598263418218,1.31976098378028,5.30980553359851,3.15614827001476,3.62788268357701,3.01768127609437,5.02013217897314,8.60818414242997,9.8202751403924,6.18007340111759,8.91243445961803,6.63677191665214,6.32511651449993,10.3135543248187,1.02131881726136,1.62054984628179,0.905510786479282,0.857348140126369,1.41872186913819,2.14042581122485,1.97458824722545,0.608929898229199,0.938686832254841,1.0591603543191,0.882113592219848,14.0153315000258,10.172258881842,13.4497822589788,19.8158091045207,19.2044852701722,3.49777003955821,39.3101640262281,1.87957968877638,8.2554747185289,5.74103034846106,1.13021074202815,1.36694227721025,1.14389086603261,0,1.25956307091292,0.414599921413271,1.90934123603023,3.95419991976419,8.94605655358134,9.07244862903131,10.245326504709,7.20596460362386,5.79916689454729,8.59595939543494,5.49687478166462,4.66613903850454,0.621339313086926,0,3.43888055901151,2.81279433777066,1.36115831840833,1.16243841129958,1.01373675294467,0.469428954583016,0.2604087696879,1.25831213310853,0.483168241652012,0.864090018773596,0,0.810900861160657,0.616265742988964,0,0.895133478337407,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0,0.201652370273681,0.194915761479505,0,0.233753804363138,15.6443964694496,0,0.62799699626633,0,7.53439416725543,1.12609485270709,1.09890974560359,4.07299920250225,1.50471631210609,7.90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| |||
|short_description=p1@Fgfr3 | |||
}} | |||
Revision as of 07:29, 14 September 2013
| Short description: | p1@Fgfr3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Fgfr3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 9bp_to_uc008xbg.2_5end |
| EntrezGene: | Fgfr3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.16e-10 | 23 |
| neuroblast (sensu Vertebrata) | 1.16e-10 | 23 |
| ectodermal cell | 5.55e-07 | 44 |
| neurectodermal cell | 5.55e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
