FFCP PHASE1:Hg19::chr9:132597722..132597755,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12619 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2K6 | |||
|association_with_transcript=0bp_to_ENST00000315480,ENST00000372429,ENST00000494971_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_USP20_5end | |||
|id=chr9:132597722..132597755,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.26e-12!25;CL:0000827!2.26e-12!25;CL:0000838!2.69e-12!52;CL:0000542!5.34e-12!53;CL:0000051!5.34e-12!53;CL:0000791!8.25e-12!18;CL:0000789!8.25e-12!18;CL:0002420!8.25e-12!18;CL:0002419!8.25e-12!18;CL:0000790!8.25e-12!18;CL:0000988!1.97e-10!182;CL:0000037!4.81e-10!172;CL:0000566!4.81e-10!172;CL:0002032!2.12e-08!165;CL:0000837!2.12e-08!165;CL:0000625!6.38e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.03e-12;25!CL:0000791;6.54e-12;18!CL:0000789;6.54e-12;18!CL:0002419;6.54e-12;18!CL:0000625;5.63e-08;11!CL:0000542;1.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.26e-12,25;CL:0000827,2.26e-12,25;CL:0000838,2.69e-12,52;CL:0000542,5.34e-12,53;CL:0000051,5.34e-12,53;CL:0000791,8.25e-12,18;CL:0000789,8.25e-12,18;CL:0002420,8.25e-12,18;CL:0002419,8.25e-12,18;CL:0000790,8.25e-12,18;CL:0000988,8.63e-11,177;CL:0000037,2.61e-10,168;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161;CL:0000625,6.38e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.54e-12;18!CL:0000051;1.01e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;1.61e-08;53!UBERON:0002616;1.61e-08;53!UBERON:0002619;2.76e-08;22!UBERON:0002780;6.16e-08;41!UBERON:0001890;6.16e-08;41!UBERON:0001950;9.17e-08;20!UBERON:0003528;9.71e-08;34!UBERON:0002020;9.71e-08;34!UBERON:0001893;1.28e-07;34!UBERON:0001869;1.40e-07;32!UBERON:0002791;1.82e-07;32!UBERON:0007023;7.65e-07;114!UBERON:0000178;9.63e-07;15!UBERON:0000179;9.63e-07;15!UBERON:0000463;9.63e-07;15 | |||
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| |||
|short_description=p1@USP20 | |||
}} |
Revision as of 07:48, 14 September 2013
Short description: | p1@USP20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_USP20_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000315480, ENST00000372429, ENST00000494971_5end |
EntrezGene: | USP20 |
HGNC: | 12619 |
UniProt: | Q9Y2K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.26e-12 | 25 |
pro-T cell | 2.26e-12 | 25 |
lymphoid lineage restricted progenitor cell | 2.69e-12 | 52 |
lymphocyte | 5.34e-12 | 53 |
common lymphoid progenitor | 5.34e-12 | 53 |
mature alpha-beta T cell | 8.25e-12 | 18 |
alpha-beta T cell | 8.25e-12 | 18 |
immature T cell | 8.25e-12 | 18 |
mature T cell | 8.25e-12 | 18 |
immature alpha-beta T cell | 8.25e-12 | 18 |
hematopoietic cell | 8.63e-11 | 177 |
hematopoietic stem cell | 2.61e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |
CD8-positive, alpha-beta T cell | 6.38e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.06e-22 | 114 |
neural tube | 9.91e-15 | 56 |
neural rod | 9.91e-15 | 56 |
future spinal cord | 9.91e-15 | 56 |
neural keel | 9.91e-15 | 56 |
regional part of nervous system | 2.69e-14 | 53 |
regional part of brain | 2.69e-14 | 53 |
nervous system | 1.22e-11 | 89 |
regional part of forebrain | 5.90e-11 | 41 |
forebrain | 5.90e-11 | 41 |
anterior neural tube | 5.90e-11 | 41 |
future forebrain | 5.90e-11 | 41 |
neurectoderm | 6.27e-11 | 86 |
central nervous system | 7.16e-11 | 81 |
neural plate | 1.64e-10 | 82 |
presumptive neural plate | 1.64e-10 | 82 |
brain | 3.29e-10 | 68 |
future brain | 3.29e-10 | 68 |
telencephalon | 6.04e-09 | 34 |
brain grey matter | 6.54e-09 | 34 |
gray matter | 6.54e-09 | 34 |
pre-chordal neural plate | 9.38e-09 | 61 |
cerebral hemisphere | 1.93e-08 | 32 |
regional part of cerebral cortex | 2.42e-08 | 22 |
regional part of telencephalon | 2.64e-08 | 32 |
neocortex | 8.34e-08 | 20 |
blood | 8.04e-07 | 15 |
haemolymphatic fluid | 8.04e-07 | 15 |
organism substance | 8.04e-07 | 15 |
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