FFCP PHASE1:Mm9::chr6:144996245..144996277,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=22|UniProt=B2KFA9|association_with_transcript=-64bp_to_ENSMUST00000149769_5end|description=CAGE_peak_8_at_Bcat1_5end|id=chr6:144996245..144996277,-|ontology_enrichment_celltype=CL:0000117!2.42e-17!23;CL:0000337!2.42e-17!23;CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000221!2.11e-15!44;CL:0000133!2.11e-15!44;CL:0002319!2.60e-15!43;CL:0000393!1.79e-12!39;CL:0000211!1.79e-12!39;CL:0000055!1.30e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-23,23;CL:0000337,1.46e-23,23;CL:0000540,4.89e-15,33;CL:0000047,4.89e-15,33;CL:0000031,4.89e-15,33;CL:0000404,4.89e-15,33;CL:0002319,2.83e-12,43;CL:0000221,8.58e-12,44;CL:0000133,8.58e-12,44;CL:0000393,1.96e-11,39;CL:0000211,1.96e-11,39;CL:0002609,1.86e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.52e-30!71;UBERON:0003075!1.52e-30!71;UBERON:0007284!1.52e-30!71;UBERON:0000073!1.63e-30!75;UBERON:0001016!1.63e-30!75;UBERON:0001017!2.96e-30!73;UBERON:0005743!2.96e-30!73;UBERON:0004121!3.05e-29!102;UBERON:0000924!3.05e-29!102;UBERON:0006601!3.05e-29!102;UBERON:0000033!8.77e-28!63;UBERON:0001049!3.16e-26!52;UBERON:0005068!3.16e-26!52;UBERON:0006241!3.16e-26!52;UBERON:0007135!3.16e-26!52;UBERON:0003056!6.10e-26!49;UBERON:0000955!1.86e-24!50;UBERON:0006238!1.86e-24!50;UBERON:0002616!1.00e-23!49;UBERON:0002020!1.44e-21!34;UBERON:0003080!3.35e-20!40;UBERON:0002780!1.11e-19!39;UBERON:0001890!1.11e-19!39;UBERON:0006240!1.11e-19!39;UBERON:0002791!3.29e-18!29;UBERON:0003528!3.29e-18!29;UBERON:0001893!3.29e-18!29;UBERON:0000153!1.94e-14!94;UBERON:0007811!2.25e-14!86;UBERON:0000956!6.55e-13!21;UBERON:0001869!6.55e-13!21;UBERON:0000203!6.55e-13!21;UBERON:0002619!7.09e-10!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.75e-37,64;UBERON:0003075,6.75e-37,64;UBERON:0007284,6.75e-37,64;UBERON:0000073,7.26e-34,54;UBERON:0001049,2.00e-32,52;UBERON:0005068,2.00e-32,52;UBERON:0006241,2.00e-32,52;UBERON:0007135,2.00e-32,52;UBERON:0003056,1.49e-30,49;UBERON:0010371,4.43e-30,73;UBERON:0001017,9.17e-30,73;UBERON:0002020,1.82e-29,34;UBERON:0004121,4.43e-29,95;UBERON:0000924,4.43e-29,95;UBERON:0006601,4.43e-29,95;UBERON:0001016,1.74e-28,75;UBERON:0000955,1.05e-27,47;UBERON:0006238,1.05e-27,47;UBERON:0002616,9.96e-27,46;UBERON:0003528,8.99e-25,29;UBERON:0002791,8.99e-25,29;UBERON:0001893,8.99e-25,29;UBERON:0003080,7.88e-24,40;UBERON:0002780,4.06e-23,39;UBERON:0001890,4.06e-23,39;UBERON:0006240,4.06e-23,39;UBERON:0010314,8.79e-23,92;UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0002619,3.81e-13,17;UBERON:0000025,5.10e-09,114;UBERON:0003076,7.66e-09,12;UBERON:0003057,7.66e-09,12;UBERON:0002420,1.71e-08,8;UBERON:0007245,1.71e-08,8;UBERON:0010009,1.71e-08,8;UBERON:0010011,1.71e-08,8;UBERON:0000454,1.71e-08,8;UBERON:0004111,1.51e-07,122;UBERON:0002021,1.81e-07,10;UBERON:0000411,1.81e-07,10;UBERON:0001950,1.81e-07,10;UBERON:0000970,2.50e-07,9;UBERON:0000019,2.50e-07,9;UBERON:0000047,2.50e-07,9;UBERON:0010312,2.50e-07,9;UBERON:0004088,2.50e-07,9;UBERON:0002104,2.50e-07,9;UBERON:0001456,2.50e-07,9;UBERON:0003072,2.50e-07,9;UBERON:0004128,2.50e-07,9;UBERON:0003071,2.50e-07,9;UBERON:0001954,3.46e-07,7;UBERON:0003022,3.46e-07,7;UBERON:0002421,3.46e-07,7;UBERON:0000349,3.46e-07,7;UBERON:0002600,3.46e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.31811709640683,1.55543919259427,0.55994568650145,0,0,0,0,0,0.286533439938757,0,8.6996078169627,11.6378015439847,9.50747105259269,0,0,0,0,0,0,0.384218305321555,14.4128561108784,16.0657066614712,17.8776217148675,2.85650984403804,2.42955395046775,9.92175473641128,12.0765293482978,10.1114066527102,2.20231761998777,1.91531007127782,2.61131106535614,10.4190167306853,8.59983849862651,10.4182674111352,2.79182999001381,1.68828783009504,2.75036845998258,3.24091444021034,3.27454865837937,8.01517617048792,0.227178579999552,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.867426633830679,0,0.230615497256059,0.904335843315735,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,2.09706895166752,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,2.28566849015516,2.27137768294861,0.101839363850316,0,0,1.05220927943237,5.85541993332167,2.98872735763515,6.84236093260327,4.67184935290717,5.17077393550092,8.07116437794554,6.55912071918102,0.517406741478031,1.5089759505299,1.13463648100692,0.703804496655795,0.657587197282725,0.556094498451196,0,0,0,0,0,0.284163499395593,1.03562886267751,1.17263029990548,1.08037236876609,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.89260953707715,7.61494131606705,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.2104074596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| ||
|EntrezGene=12035 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=B2KFA9 | |||
|association_with_transcript=-64bp_to_ENSMUST00000149769_5end | |||
|description=CAGE_peak_8_at_Bcat1_5end | |||
|id=chr6:144996245..144996277,- | |||
|ontology_enrichment_celltype=CL:0000117!2.42e-17!23;CL:0000337!2.42e-17!23;CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000221!2.11e-15!44;CL:0000133!2.11e-15!44;CL:0002319!2.60e-15!43;CL:0000393!1.79e-12!39;CL:0000211!1.79e-12!39;CL:0000055!1.30e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-23,23;CL:0000337,1.46e-23,23;CL:0000540,4.89e-15,33;CL:0000047,4.89e-15,33;CL:0000031,4.89e-15,33;CL:0000404,4.89e-15,33;CL:0002319,2.83e-12,43;CL:0000221,8.58e-12,44;CL:0000133,8.58e-12,44;CL:0000393,1.96e-11,39;CL:0000211,1.96e-11,39;CL:0002609,1.86e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.52e-30!71;UBERON:0003075!1.52e-30!71;UBERON:0007284!1.52e-30!71;UBERON:0000073!1.63e-30!75;UBERON:0001016!1.63e-30!75;UBERON:0001017!2.96e-30!73;UBERON:0005743!2.96e-30!73;UBERON:0004121!3.05e-29!102;UBERON:0000924!3.05e-29!102;UBERON:0006601!3.05e-29!102;UBERON:0000033!8.77e-28!63;UBERON:0001049!3.16e-26!52;UBERON:0005068!3.16e-26!52;UBERON:0006241!3.16e-26!52;UBERON:0007135!3.16e-26!52;UBERON:0003056!6.10e-26!49;UBERON:0000955!1.86e-24!50;UBERON:0006238!1.86e-24!50;UBERON:0002616!1.00e-23!49;UBERON:0002020!1.44e-21!34;UBERON:0003080!3.35e-20!40;UBERON:0002780!1.11e-19!39;UBERON:0001890!1.11e-19!39;UBERON:0006240!1.11e-19!39;UBERON:0002791!3.29e-18!29;UBERON:0003528!3.29e-18!29;UBERON:0001893!3.29e-18!29;UBERON:0000153!1.94e-14!94;UBERON:0007811!2.25e-14!86;UBERON:0000956!6.55e-13!21;UBERON:0001869!6.55e-13!21;UBERON:0000203!6.55e-13!21;UBERON:0002619!7.09e-10!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.75e-37,64;UBERON:0003075,6.75e-37,64;UBERON:0007284,6.75e-37,64;UBERON:0000073,7.26e-34,54;UBERON:0001049,2.00e-32,52;UBERON:0005068,2.00e-32,52;UBERON:0006241,2.00e-32,52;UBERON:0007135,2.00e-32,52;UBERON:0003056,1.49e-30,49;UBERON:0010371,4.43e-30,73;UBERON:0001017,9.17e-30,73;UBERON:0002020,1.82e-29,34;UBERON:0004121,4.43e-29,95;UBERON:0000924,4.43e-29,95;UBERON:0006601,4.43e-29,95;UBERON:0001016,1.74e-28,75;UBERON:0000955,1.05e-27,47;UBERON:0006238,1.05e-27,47;UBERON:0002616,9.96e-27,46;UBERON:0003528,8.99e-25,29;UBERON:0002791,8.99e-25,29;UBERON:0001893,8.99e-25,29;UBERON:0003080,7.88e-24,40;UBERON:0002780,4.06e-23,39;UBERON:0001890,4.06e-23,39;UBERON:0006240,4.06e-23,39;UBERON:0010314,8.79e-23,92;UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0002619,3.81e-13,17;UBERON:0000025,5.10e-09,114;UBERON:0003076,7.66e-09,12;UBERON:0003057,7.66e-09,12;UBERON:0002420,1.71e-08,8;UBERON:0007245,1.71e-08,8;UBERON:0010009,1.71e-08,8;UBERON:0010011,1.71e-08,8;UBERON:0000454,1.71e-08,8;UBERON:0004111,1.51e-07,122;UBERON:0002021,1.81e-07,10;UBERON:0000411,1.81e-07,10;UBERON:0001950,1.81e-07,10;UBERON:0000970,2.50e-07,9;UBERON:0000019,2.50e-07,9;UBERON:0000047,2.50e-07,9;UBERON:0010312,2.50e-07,9;UBERON:0004088,2.50e-07,9;UBERON:0002104,2.50e-07,9;UBERON:0001456,2.50e-07,9;UBERON:0003072,2.50e-07,9;UBERON:0004128,2.50e-07,9;UBERON:0003071,2.50e-07,9;UBERON:0001954,3.46e-07,7;UBERON:0003022,3.46e-07,7;UBERON:0002421,3.46e-07,7;UBERON:0000349,3.46e-07,7;UBERON:0002600,3.46e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.31811709640683,1.55543919259427,0.55994568650145,0,0,0,0,0,0.286533439938757,0,8.6996078169627,11.6378015439847,9.50747105259269,0,0,0,0,0,0,0.384218305321555,14.4128561108784,16.0657066614712,17.8776217148675,2.85650984403804,2.42955395046775,9.92175473641128,12.0765293482978,10.1114066527102,2.20231761998777,1.91531007127782,2.61131106535614,10.4190167306853,8.59983849862651,10.4182674111352,2.79182999001381,1.68828783009504,2.75036845998258,3.24091444021034,3.27454865837937,8.01517617048792,0.227178579999552,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.867426633830679,0,0.230615497256059,0.904335843315735,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,2.09706895166752,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,2.28566849015516,2.27137768294861,0.101839363850316,0,0,1.05220927943237,5.85541993332167,2.98872735763515,6.84236093260327,4.67184935290717,5.17077393550092,8.07116437794554,6.55912071918102,0.517406741478031,1.5089759505299,1.13463648100692,0.703804496655795,0.657587197282725,0.556094498451196,0,0,0,0,0,0.284163499395593,1.03562886267751,1.17263029990548,1.08037236876609,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.89260953707715,7.61494131606705,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.21962071731931,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.445597348164788,0.849229592366497,1.61924280669958,0.292255857911312,0.395287777946524,3.85585579706168,6.10342366395555,0.890328018336276,0,1.97964147567043,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,2.88097750450096,1.4229455216103,0.428674070063185,0,0.356737635204141,0.493647061806363,1.8267896946876,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44279178808428,3.84618410961257,0.214368379079066,0,1.12950368523413,2.76195141904306,1.71868654031819,2.57779773515531,2.05524755931193,2.2661816921691,2.70009000092722,1.80128481289688,1.81256963593682,1.55328093525546,3.94391920819871,3.59122386060928,2.39027048055788,0.486213434136588,0.838452650511929,0.551530525350042,1.55572709461131,0.618105171716683,0.962757628775446,1.51618327058278,2.28131369901216,1.13175804831646,1.31098110457835,1.40855335290712,1.32101578597911,0,1.27472758539341,1.73618298417335,3.70877310722976,2.50238164228475,0.342869252385415,0.70990322463735,0.953744759789284,0.726732083161643,1.78807822789128,1.26921911837515,0.548783918618318,1.57841826862706,1.22223702461276,2.24456908663095,0.949080144993393,1.77308068276014,1.63692417267876,1.08455788830176,1.15743966588685,2.74791635731741,1.63752125911786,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p8@Bcat1 | |||
}} |
Revision as of 09:20, 14 September 2013
Short description: | p8@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -64bp_to_ENSMUST00000149769_5end |
EntrezGene: | Bcat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.46e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-23 | 23 |
neuron | 4.89e-15 | 33 |
neuronal stem cell | 4.89e-15 | 33 |
neuroblast | 4.89e-15 | 33 |
electrically signaling cell | 4.89e-15 | 33 |
neural cell | 2.83e-12 | 43 |
ectodermal cell | 8.58e-12 | 44 |
neurectodermal cell | 8.58e-12 | 44 |
electrically responsive cell | 1.96e-11 | 39 |
electrically active cell | 1.96e-11 | 39 |
neuron of cerebral cortex | 1.86e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.