FFCP PHASE1:Mm9::chr7:119370265..119370303,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:119370265..119370303,+|id=chr7:119370265..119370303,+|ontology_enrichment_celltype=CL:0000222!9.57e-07!7|ontology_enrichment_celltype_v019_2=CL:0000222,8.80e-19,7;CL:0000680,8.73e-17,6;CL:0000187,8.73e-17,6;CL:0000056,8.73e-17,6;CL:0000355,6.14e-11,9;CL:0000192,1.89e-09,3;CL:0000359,1.89e-09,3;CL:0002539,1.89e-09,3;CL:0000514,1.89e-09,3;CL:0002494,5.76e-09,3;CL:0000737,5.76e-09,3;CL:0000746,5.76e-09,3;CL:0000513,5.76e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.33e-15!23;UBERON:0001009!6.33e-15!23;UBERON:0004872!1.78e-11!33;UBERON:0007100!2.07e-11!18;UBERON:0000948!2.07e-11!18;UBERON:0005498!2.07e-11!18;UBERON:0004140!2.07e-11!18;UBERON:0009881!2.07e-11!18;UBERON:0004141!2.07e-11!18;UBERON:0003084!2.07e-11!18;UBERON:0007005!2.07e-11!18;UBERON:0004139!2.07e-11!18;UBERON:0004291!2.07e-11!18;UBERON:0002048!4.24e-07!14;UBERON:0000117!4.24e-07!14;UBERON:0000171!4.24e-07!14;UBERON:0000170!4.24e-07!14;UBERON:0005597!4.24e-07!14;UBERON:0000118!4.24e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.67e-14,23;UBERON:0001009,1.67e-14,23;UBERON:0004872,4.87e-13,33;UBERON:0002048,2.82e-11,14;UBERON:0000117,2.82e-11,14;UBERON:0000171,2.82e-11,14;UBERON:0000170,2.82e-11,14;UBERON:0005597,2.82e-11,14;UBERON:0000118,2.82e-11,14;UBERON:0005178,3.18e-11,17;UBERON:0005181,3.18e-11,17;UBERON:0002224,3.18e-11,17;UBERON:0000915,3.18e-11,17;UBERON:0008947,3.18e-11,17;UBERON:0003258,3.18e-11,17;UBERON:0001134,6.14e-11,9;UBERON:0002036,6.14e-11,9;UBERON:0002385,6.14e-11,9;UBERON:0000486,6.14e-11,9;UBERON:0007503,6.14e-11,9;UBERON:0001015,6.14e-11,9;UBERON:0002329,6.14e-11,9;UBERON:0003082,6.14e-11,9;UBERON:0003059,6.14e-11,9;UBERON:0007282,6.14e-11,9;UBERON:0004290,6.14e-11,9;UBERON:0009618,6.14e-11,9;UBERON:0000383,9.10e-10,10;UBERON:0001135,1.89e-09,3;UBERON:0004237,1.89e-09,3;UBERON:0004695,1.89e-09,3;UBERON:0002111,1.89e-09,3;UBERON:0004178,1.89e-09,3;UBERON:0000055,3.85e-09,5;UBERON:0007500,3.85e-09,5;UBERON:0001981,3.85e-09,5;UBERON:0002049,3.85e-09,5;UBERON:0007798,3.85e-09,5;UBERON:0004537,3.85e-09,5;UBERON:0006965,3.85e-09,5;UBERON:0005153,4.81e-09,17;UBERON:0007524,8.26e-09,11;UBERON:0003077,8.26e-09,11;UBERON:0007285,8.26e-09,11;UBERON:0007100,3.04e-08,18;UBERON:0000948,3.04e-08,18;UBERON:0005498,3.04e-08,18;UBERON:0004140,3.04e-08,18;UBERON:0009881,3.04e-08,18;UBERON:0004141,3.04e-08,18;UBERON:0003084,3.04e-08,18;UBERON:0007005,3.04e-08,18;UBERON:0004139,3.04e-08,18;UBERON:0004291,3.04e-08,18;UBERON:0005157,1.74e-07,20;UBERON:0000947,3.65e-07,4;UBERON:0001637,3.65e-07,4;UBERON:0004573,3.65e-07,4;UBERON:0003509,3.65e-07,4;UBERON:0004571,3.65e-07,4;UBERON:0010191,3.65e-07,4;UBERON:0004572,3.65e-07,4|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,3.4468156614635,4.40512205188036,0.782391344348039,0.218025156380447,0,0,1.39986421625363,0,0,0,0,2.82985379639542,1.43266719969378,2.57836046138721,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.151143120213571,1.15945795480671,0,0,0,0,0,0.280888840263504,0.852151612890289,0.259786004602869,0,0,1.28326477414318,0,0,0,0,1.01104889002957,0.22836775943812,0,0,0.867426633830679,0,0.230615497256059,0,0,0.251333182659351,0.988779870937496,0.722996784599558,0,0,0.662524555381181,0,1.86391761218122,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0.828503090142008,0.938104239924385,1.2604344302271,0.946978942340841,2.16440654922144,0.617068451549513,2.09280550275367,1.60964040839772,1.16765342367169,0.493679549740441,0.656669856316381,0.648550476366846,0.877199924551994,0.658650345873152,0.536825675041487,0.210289948564127,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0.257734922644187,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,1.72910439899755,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,4.0645701836653,0.189491411770485,0,0.339490171550376,0.234690248288502,1.00503754465089,2.38043640886014,0.780534591431195,0.788175720530955,1.55025282754142,1.59454768657487,1.63863314715738,3.45369963731791,2.60368305446721,0,0,0,0,0.16055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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:119370265..119370303,+ | |||
|id=chr7:119370265..119370303,+ | |||
|ontology_enrichment_celltype=CL:0000222!9.57e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.80e-19,7;CL:0000680,8.73e-17,6;CL:0000187,8.73e-17,6;CL:0000056,8.73e-17,6;CL:0000355,6.14e-11,9;CL:0000192,1.89e-09,3;CL:0000359,1.89e-09,3;CL:0002539,1.89e-09,3;CL:0000514,1.89e-09,3;CL:0002494,5.76e-09,3;CL:0000737,5.76e-09,3;CL:0000746,5.76e-09,3;CL:0000513,5.76e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.33e-15!23;UBERON:0001009!6.33e-15!23;UBERON:0004872!1.78e-11!33;UBERON:0007100!2.07e-11!18;UBERON:0000948!2.07e-11!18;UBERON:0005498!2.07e-11!18;UBERON:0004140!2.07e-11!18;UBERON:0009881!2.07e-11!18;UBERON:0004141!2.07e-11!18;UBERON:0003084!2.07e-11!18;UBERON:0007005!2.07e-11!18;UBERON:0004139!2.07e-11!18;UBERON:0004291!2.07e-11!18;UBERON:0002048!4.24e-07!14;UBERON:0000117!4.24e-07!14;UBERON:0000171!4.24e-07!14;UBERON:0000170!4.24e-07!14;UBERON:0005597!4.24e-07!14;UBERON:0000118!4.24e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.67e-14,23;UBERON:0001009,1.67e-14,23;UBERON:0004872,4.87e-13,33;UBERON:0002048,2.82e-11,14;UBERON:0000117,2.82e-11,14;UBERON:0000171,2.82e-11,14;UBERON:0000170,2.82e-11,14;UBERON:0005597,2.82e-11,14;UBERON:0000118,2.82e-11,14;UBERON:0005178,3.18e-11,17;UBERON:0005181,3.18e-11,17;UBERON:0002224,3.18e-11,17;UBERON:0000915,3.18e-11,17;UBERON:0008947,3.18e-11,17;UBERON:0003258,3.18e-11,17;UBERON:0001134,6.14e-11,9;UBERON:0002036,6.14e-11,9;UBERON:0002385,6.14e-11,9;UBERON:0000486,6.14e-11,9;UBERON:0007503,6.14e-11,9;UBERON:0001015,6.14e-11,9;UBERON:0002329,6.14e-11,9;UBERON:0003082,6.14e-11,9;UBERON:0003059,6.14e-11,9;UBERON:0007282,6.14e-11,9;UBERON:0004290,6.14e-11,9;UBERON:0009618,6.14e-11,9;UBERON:0000383,9.10e-10,10;UBERON:0001135,1.89e-09,3;UBERON:0004237,1.89e-09,3;UBERON:0004695,1.89e-09,3;UBERON:0002111,1.89e-09,3;UBERON:0004178,1.89e-09,3;UBERON:0000055,3.85e-09,5;UBERON:0007500,3.85e-09,5;UBERON:0001981,3.85e-09,5;UBERON:0002049,3.85e-09,5;UBERON:0007798,3.85e-09,5;UBERON:0004537,3.85e-09,5;UBERON:0006965,3.85e-09,5;UBERON:0005153,4.81e-09,17;UBERON:0007524,8.26e-09,11;UBERON:0003077,8.26e-09,11;UBERON:0007285,8.26e-09,11;UBERON:0007100,3.04e-08,18;UBERON:0000948,3.04e-08,18;UBERON:0005498,3.04e-08,18;UBERON:0004140,3.04e-08,18;UBERON:0009881,3.04e-08,18;UBERON:0004141,3.04e-08,18;UBERON:0003084,3.04e-08,18;UBERON:0007005,3.04e-08,18;UBERON:0004139,3.04e-08,18;UBERON:0004291,3.04e-08,18;UBERON:0005157,1.74e-07,20;UBERON:0000947,3.65e-07,4;UBERON:0001637,3.65e-07,4;UBERON:0004573,3.65e-07,4;UBERON:0003509,3.65e-07,4;UBERON:0004571,3.65e-07,4;UBERON:0010191,3.65e-07,4;UBERON:0004572,3.65e-07,4 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,3.4468156614635,4.40512205188036,0.782391344348039,0.218025156380447,0,0,1.39986421625363,0,0,0,0,2.82985379639542,1.43266719969378,2.57836046138721,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.151143120213571,1.15945795480671,0,0,0,0,0,0.280888840263504,0.852151612890289,0.259786004602869,0,0,1.28326477414318,0,0,0,0,1.01104889002957,0.22836775943812,0,0,0.867426633830679,0,0.230615497256059,0,0,0.251333182659351,0.988779870937496,0.722996784599558,0,0,0.662524555381181,0,1.86391761218122,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0.347648640384553,0.767146371990992,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0.828503090142008,0.938104239924385,1.2604344302271,0.946978942340841,2.16440654922144,0.617068451549513,2.09280550275367,1.60964040839772,1.16765342367169,0.493679549740441,0.656669856316381,0.648550476366846,0.877199924551994,0.658650345873152,0.536825675041487,0.210289948564127,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0.257734922644187,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,1.72910439899755,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,4.0645701836653,0.189491411770485,0,0.339490171550376,0.234690248288502,1.00503754465089,2.38043640886014,0.780534591431195,0.788175720530955,1.55025282754142,1.59454768657487,1.63863314715738,3.45369963731791,2.60368305446721,0,0,0,0,0.160550589987792,0,0.491804836130026,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0,0.989820737835213,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,2.3467170806371,1.48282449604674,0.220528398054962,1.31909002353184,0.161464426695906,0.301564624640779,0.477489376012546,1.31312719796049,0.291480836629851,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.627264888043406,0.655087691238533,0.539457385539283,0.578574190077352,1.04702376793612,1.8146096260851,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.129159823477731,0.168956125490778,0,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0,0,0,1.15913756419314,0.93841237725591,0.36630324853453,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.0936415074698824,0,0.17230640686684,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0,0,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr7:119370265..119370303,+ | |||
}} |
Revision as of 11:29, 14 September 2013
Short description: | p@chr7:119370265..119370303, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:119370265..119370303, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.80e-19 | 7 |
muscle precursor cell | 8.73e-17 | 6 |
muscle cell | 8.73e-17 | 6 |
myoblast | 8.73e-17 | 6 |
multi-potent skeletal muscle stem cell | 6.14e-11 | 9 |
smooth muscle cell | 1.89e-09 | 3 |
vascular associated smooth muscle cell | 1.89e-09 | 3 |
aortic smooth muscle cell | 1.89e-09 | 3 |
smooth muscle myoblast | 1.89e-09 | 3 |
cardiocyte | 5.76e-09 | 3 |
striated muscle cell | 5.76e-09 | 3 |
cardiac muscle cell | 5.76e-09 | 3 |
cardiac muscle myoblast | 5.76e-09 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.