FFCP PHASE1:Mm9::chr7:135832680..135832690,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:135832680..135832690,+|id=chr7:135832680..135832690,+|ontology_enrichment_celltype=CL:0000117!2.53e-16!23;CL:0000337!2.53e-16!23;CL:0000540!6.74e-15!33;CL:0000047!6.74e-15!33;CL:0000031!6.74e-15!33;CL:0000404!6.74e-15!33;CL:0000393!4.86e-11!39;CL:0000211!4.86e-11!39;CL:0002319!2.08e-09!43;CL:0000221!2.51e-09!44;CL:0000133!2.51e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-27,23;CL:0000337,1.77e-27,23;CL:0000540,5.48e-18,33;CL:0000047,5.48e-18,33;CL:0000031,5.48e-18,33;CL:0000404,5.48e-18,33;CL:0000393,6.64e-14,39;CL:0000211,6.64e-14,39;CL:0002319,7.61e-12,43;CL:0000221,2.16e-11,44;CL:0000133,2.16e-11,44;CL:0002609,5.00e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.19e-23!71;UBERON:0003075!5.19e-23!71;UBERON:0007284!5.19e-23!71;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0000073!2.79e-22!75;UBERON:0001016!2.79e-22!75;UBERON:0004121!8.54e-22!102;UBERON:0000924!8.54e-22!102;UBERON:0006601!8.54e-22!102;UBERON:0001049!4.40e-20!52;UBERON:0005068!4.40e-20!52;UBERON:0006241!4.40e-20!52;UBERON:0007135!4.40e-20!52;UBERON:0000033!8.85e-19!63;UBERON:0000955!5.21e-18!50;UBERON:0006238!5.21e-18!50;UBERON:0003056!7.64e-18!49;UBERON:0002616!1.43e-17!49;UBERON:0002020!1.60e-16!34;UBERON:0003080!1.34e-15!40;UBERON:0002780!4.08e-15!39;UBERON:0001890!4.08e-15!39;UBERON:0006240!4.08e-15!39;UBERON:0002791!5.88e-13!29;UBERON:0003528!5.88e-13!29;UBERON:0001893!5.88e-13!29;UBERON:0007811!9.85e-11!86;UBERON:0000956!2.45e-08!21;UBERON:0001869!2.45e-08!21;UBERON:0000203!2.45e-08!21;UBERON:0000153!2.96e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.82e-30,54;UBERON:0001049,1.48e-28,52;UBERON:0005068,1.48e-28,52;UBERON:0006241,1.48e-28,52;UBERON:0007135,1.48e-28,52;UBERON:0001017,2.16e-27,73;UBERON:0002346,4.30e-27,64;UBERON:0003075,4.30e-27,64;UBERON:0007284,4.30e-27,64;UBERON:0001016,3.11e-26,75;UBERON:0002020,2.66e-25,34;UBERON:0000955,2.66e-22,47;UBERON:0006238,2.66e-22,47;UBERON:0010371,6.43e-22,73;UBERON:0002616,1.39e-21,46;UBERON:0004121,2.15e-21,95;UBERON:0000924,2.15e-21,95;UBERON:0006601,2.15e-21,95;UBERON:0003080,1.43e-19,40;UBERON:0003528,3.41e-19,29;UBERON:0002791,3.41e-19,29;UBERON:0001893,3.41e-19,29;UBERON:0003056,7.11e-19,49;UBERON:0002780,8.91e-19,39;UBERON:0001890,8.91e-19,39;UBERON:0006240,8.91e-19,39;UBERON:0010314,3.26e-15,92;UBERON:0000956,1.54e-12,21;UBERON:0001869,1.54e-12,21;UBERON:0000203,1.54e-12,21;UBERON:0003076,1.53e-09,12;UBERON:0003057,1.53e-09,12;UBERON:0002619,8.61e-09,17;UBERON:0002240,9.46e-09,6;UBERON:0005174,9.46e-09,6;UBERON:0001137,9.46e-09,6;UBERON:0002420,5.09e-08,8;UBERON:0007245,5.09e-08,8;UBERON:0010009,5.09e-08,8;UBERON:0010011,5.09e-08,8;UBERON:0000454,5.09e-08,8;UBERON:0001948,1.06e-07,5;UBERON:0002315,1.06e-07,5;UBERON:0000025,9.02e-07,114|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0.34243593645101,0.0797721589953364,0,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,1.36069264241712,0.0992909512008853,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,12.9482534950143,25.3915670050576,7.60597684207415,0,0,0,0,0,0.299600110518405,0.384218305321555,9.64313394468842,13.3655878948374,8.83364837675805,22.8520787523043,17.0068776532742,9.55428233876641,4.60058260887535,6.43453150627015,3.30347642998166,4.46905683298157,5.06901559745603,15.1669230889723,9.78917786545783,23.4411016750542,6.14202597803038,6.19038871034848,7.33431589328689,25.6326869362091,28.0472211174233,27.0279196446686,0.530083353332288,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.22836775943812,0,0.148442139064825,1.21439728736295,0.913396434936424,0.922461989024234,0.753613202763113,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,1.75668478206928,6.28340120440365,0,0,0,0,2.54644086988199,0.915001205637253,35.5601816479406,2.25971616249959,3.06858548796397,4.1557608911912,4.54275536589721,0.305518091550949,0.124406970610093,0,0.420883711772948,0.780722657776222,0.919608417733892,0.900310649026746,1.35634336052144,1.56483948048054,2.8185018462667,2.06143794031403,0.517406741478031,0,0.189106080167819,0,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0.703578179943289,0,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.162137619091711,0,0,0.134206418760372,1.47202963994889,20.5809224758569,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:135832680..135832690,+ | |||
|id=chr7:135832680..135832690,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.53e-16!23;CL:0000337!2.53e-16!23;CL:0000540!6.74e-15!33;CL:0000047!6.74e-15!33;CL:0000031!6.74e-15!33;CL:0000404!6.74e-15!33;CL:0000393!4.86e-11!39;CL:0000211!4.86e-11!39;CL:0002319!2.08e-09!43;CL:0000221!2.51e-09!44;CL:0000133!2.51e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-27,23;CL:0000337,1.77e-27,23;CL:0000540,5.48e-18,33;CL:0000047,5.48e-18,33;CL:0000031,5.48e-18,33;CL:0000404,5.48e-18,33;CL:0000393,6.64e-14,39;CL:0000211,6.64e-14,39;CL:0002319,7.61e-12,43;CL:0000221,2.16e-11,44;CL:0000133,2.16e-11,44;CL:0002609,5.00e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.19e-23!71;UBERON:0003075!5.19e-23!71;UBERON:0007284!5.19e-23!71;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0000073!2.79e-22!75;UBERON:0001016!2.79e-22!75;UBERON:0004121!8.54e-22!102;UBERON:0000924!8.54e-22!102;UBERON:0006601!8.54e-22!102;UBERON:0001049!4.40e-20!52;UBERON:0005068!4.40e-20!52;UBERON:0006241!4.40e-20!52;UBERON:0007135!4.40e-20!52;UBERON:0000033!8.85e-19!63;UBERON:0000955!5.21e-18!50;UBERON:0006238!5.21e-18!50;UBERON:0003056!7.64e-18!49;UBERON:0002616!1.43e-17!49;UBERON:0002020!1.60e-16!34;UBERON:0003080!1.34e-15!40;UBERON:0002780!4.08e-15!39;UBERON:0001890!4.08e-15!39;UBERON:0006240!4.08e-15!39;UBERON:0002791!5.88e-13!29;UBERON:0003528!5.88e-13!29;UBERON:0001893!5.88e-13!29;UBERON:0007811!9.85e-11!86;UBERON:0000956!2.45e-08!21;UBERON:0001869!2.45e-08!21;UBERON:0000203!2.45e-08!21;UBERON:0000153!2.96e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.82e-30,54;UBERON:0001049,1.48e-28,52;UBERON:0005068,1.48e-28,52;UBERON:0006241,1.48e-28,52;UBERON:0007135,1.48e-28,52;UBERON:0001017,2.16e-27,73;UBERON:0002346,4.30e-27,64;UBERON:0003075,4.30e-27,64;UBERON:0007284,4.30e-27,64;UBERON:0001016,3.11e-26,75;UBERON:0002020,2.66e-25,34;UBERON:0000955,2.66e-22,47;UBERON:0006238,2.66e-22,47;UBERON:0010371,6.43e-22,73;UBERON:0002616,1.39e-21,46;UBERON:0004121,2.15e-21,95;UBERON:0000924,2.15e-21,95;UBERON:0006601,2.15e-21,95;UBERON:0003080,1.43e-19,40;UBERON:0003528,3.41e-19,29;UBERON:0002791,3.41e-19,29;UBERON:0001893,3.41e-19,29;UBERON:0003056,7.11e-19,49;UBERON:0002780,8.91e-19,39;UBERON:0001890,8.91e-19,39;UBERON:0006240,8.91e-19,39;UBERON:0010314,3.26e-15,92;UBERON:0000956,1.54e-12,21;UBERON:0001869,1.54e-12,21;UBERON:0000203,1.54e-12,21;UBERON:0003076,1.53e-09,12;UBERON:0003057,1.53e-09,12;UBERON:0002619,8.61e-09,17;UBERON:0002240,9.46e-09,6;UBERON:0005174,9.46e-09,6;UBERON:0001137,9.46e-09,6;UBERON:0002420,5.09e-08,8;UBERON:0007245,5.09e-08,8;UBERON:0010009,5.09e-08,8;UBERON:0010011,5.09e-08,8;UBERON:0000454,5.09e-08,8;UBERON:0001948,1.06e-07,5;UBERON:0002315,1.06e-07,5;UBERON:0000025,9.02e-07,114 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0.34243593645101,0.0797721589953364,0,0.262261207256992,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,1.36069264241712,0.0992909512008853,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,12.9482534950143,25.3915670050576,7.60597684207415,0,0,0,0,0,0.299600110518405,0.384218305321555,9.64313394468842,13.3655878948374,8.83364837675805,22.8520787523043,17.0068776532742,9.55428233876641,4.60058260887535,6.43453150627015,3.30347642998166,4.46905683298157,5.06901559745603,15.1669230889723,9.78917786545783,23.4411016750542,6.14202597803038,6.19038871034848,7.33431589328689,25.6326869362091,28.0472211174233,27.0279196446686,0.530083353332288,0.151143120213571,0.579728977403356,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.22836775943812,0,0.148442139064825,1.21439728736295,0.913396434936424,0.922461989024234,0.753613202763113,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,1.75668478206928,6.28340120440365,0,0,0,0,2.54644086988199,0.915001205637253,35.5601816479406,2.25971616249959,3.06858548796397,4.1557608911912,4.54275536589721,0.305518091550949,0.124406970610093,0,0.420883711772948,0.780722657776222,0.919608417733892,0.900310649026746,1.35634336052144,1.56483948048054,2.8185018462667,2.06143794031403,0.517406741478031,0,0.189106080167819,0,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0.703578179943289,0,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.492502392237286,0.162137619091711,0,0,0.134206418760372,1.47202963994889,20.5809224758569,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.754005626400808,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.571242563048644,0,0,0,0.350679099451593,0.126473074248515,0.590440591918409,0.31399745568275,0,0,0,0,0.449724224769707,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0.339490171550376,0.234690248288502,0,0,0.585400943573396,0,0.8858587585951,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0.54390568381871,0.491764273019036,0,2.88991061978026,5.39173758324135,0,0.252470927204373,1.89304931649754,0,0.861693590931196,0,0.891194696329576,0.566153061577665,0.809621403349789,0.876767573733936,0.790575555893047,1.92792789853084,0,0.178065603667255,0,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.363533729477506,1.06949213515416,0.948110273807448,0,0,1.70219802876894,0.900305470156551,0.258717367565509,0.643011105094777,0.354680467284547,1.07021290561242,2.13913726782757,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,6.48988557036784,0.170870880797853,0,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.436725127492355,0.404593039154462,0.165306911450672,0.26175594198403,0,0,1.12738587736838,0.598066184175915,0,0.388902376688095,0.387479470433193,0.506868376472335,0.234714477291508,0.5208175393758,0.734015410979976,0.724752362478018,0.288030006257865,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.443068581523732,0.100966449948148,0.228620419965,0.302478555410522,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,4.51801474093653,3.22227665555024,2.29158205375759,5.84300819968538,0.685082519770642,1.5107877947794,3.37511250115903,0.900642406448441,1.81256963593682,3.62432218226274,1.45302286617847,0.399024873401031,1.19513524027894,2.91728060481953,2.51535795153579,0.551530525350042,1.11123363900808,1.64828045791115,0.962757628775446,1.76888048234658,2.02783439912192,0.377252682772152,2.52832070168682,1.60062881012173,2.64203157195821,1.42888107384922,1.39061191133827,2.12200142510076,0.824171801606613,0.588795680537589,2.05721551431249,3.54951612318675,2.38436189947321,3.0522747492789,3.67026583619789,3.55381353145041,1.64635175585495,1.8414879800649,1.90125759384206,0.561142271657738,1.18635018124174,2.06859412988683,0,1.23949472948773,0.964533054905707,1.74867404556562,0.701794825336225,1.50409737833809,0.191288332068843,1.10295709559758,0.231867835620421 | |||
|short_description=p@chr7:135832680..135832690,+ | |||
}} |
Revision as of 12:01, 14 September 2013
Short description: | p@chr7:135832680..135832690, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:135832680..135832690, + |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.77e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-27 | 23 |
neuron | 5.48e-18 | 33 |
neuronal stem cell | 5.48e-18 | 33 |
neuroblast | 5.48e-18 | 33 |
electrically signaling cell | 5.48e-18 | 33 |
electrically responsive cell | 6.64e-14 | 39 |
electrically active cell | 6.64e-14 | 39 |
neural cell | 7.61e-12 | 43 |
ectodermal cell | 2.16e-11 | 44 |
neurectodermal cell | 2.16e-11 | 44 |
neuron of cerebral cortex | 5.00e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.