FFCP PHASE1:Mm9::chr7:20525800..20525814,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=21|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:20525800..20525814,+|id=chr7:20525800..20525814,+|ontology_enrichment_celltype=CL:0000791!2.27e-13!9;CL:0000789!2.27e-13!9;CL:0002420!2.27e-13!9;CL:0002419!2.27e-13!9;CL:0000790!2.27e-13!9;CL:0000624!1.18e-11!8;CL:0000084!1.33e-10!11;CL:0000827!1.33e-10!11;CL:0000838!1.44e-09!12;CL:0000542!1.08e-08!13;CL:0000051!1.08e-08!13;CL:0000893!3.82e-08!6;CL:0002489!3.82e-08!6;CL:0000898!3.82e-08!6;CL:0000809!3.82e-08!6;CL:0000810!3.82e-08!6;CL:0000895!3.82e-08!6;CL:0000808!3.82e-08!6;CL:0000894!3.82e-08!6;CL:0000806!3.82e-08!6;CL:0000807!3.82e-08!6;CL:0000805!3.82e-08!6;CL:0002425!3.82e-08!6;CL:0002436!3.82e-08!6;CL:0002427!3.82e-08!6;CL:0002428!3.82e-08!6;CL:0002429!3.82e-08!6;CL:0002433!3.82e-08!6;CL:0002431!3.82e-08!6;CL:0002432!3.82e-08!6|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-59,9;CL:0000789,2.18e-59,9;CL:0002420,2.18e-59,9;CL:0002419,2.18e-59,9;CL:0000790,2.18e-59,9;CL:0000624,1.79e-49,8;CL:0000084,1.18e-48,11;CL:0000827,1.18e-48,11;CL:0000838,1.26e-44,12;CL:0000542,3.24e-41,13;CL:0000051,3.24e-41,13;CL:0000738,1.40e-31,17;CL:0002087,1.40e-31,17;CL:0000893,1.03e-29,6;CL:0002489,1.03e-29,6;CL:0000898,1.03e-29,6;CL:0000809,1.03e-29,6;CL:0000810,1.03e-29,6;CL:0000895,1.03e-29,6;CL:0000808,1.03e-29,6;CL:0000894,1.03e-29,6;CL:0000806,1.03e-29,6;CL:0000807,1.03e-29,6;CL:0000805,1.03e-29,6;CL:0002425,1.03e-29,6;CL:0002436,1.03e-29,6;CL:0002427,1.03e-29,6;CL:0002428,1.03e-29,6;CL:0002429,1.03e-29,6;CL:0002433,1.03e-29,6;CL:0002431,1.03e-29,6;CL:0002432,1.03e-29,6;CL:0002031,1.57e-21,25;CL:0000988,7.62e-17,32;CL:0002032,7.62e-17,32;CL:0000037,7.62e-17,32;CL:0000837,7.62e-17,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,2.59e-12,1;CL:0000792,2.59e-12,1;CL:0000625,5.53e-12,1;CL:0000213,7.11e-12,1;CL:0002078,7.11e-12,1;CL:0000115,7.11e-12,1;CL:0002262,7.11e-12,1;CL:1000398,7.11e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!3.16e-21!41;UBERON:0001004!1.49e-20!42;UBERON:0002370!1.01e-16!23;UBERON:0000974!1.01e-16!23;UBERON:0004807!1.01e-16!23;UBERON:0005058!1.01e-16!23;UBERON:0003351!1.01e-16!23;UBERON:0009113!1.01e-16!23;UBERON:0003295!1.01e-16!23;UBERON:0009722!1.01e-16!23;UBERON:0005562!1.01e-16!23;UBERON:0007690!1.01e-16!23;UBERON:0004177!6.68e-16!29;UBERON:0006562!7.70e-16!24;UBERON:0003408!7.70e-16!24;UBERON:0001557!7.70e-16!24;UBERON:0001042!7.70e-16!24;UBERON:0008814!7.70e-16!24;UBERON:0009145!7.70e-16!24;UBERON:0000072!1.64e-15!27;UBERON:0001041!8.20e-14!92;UBERON:0000077!1.21e-12!97;UBERON:0005911!3.84e-12!69;UBERON:0000063!6.54e-11!35;UBERON:0003104!6.03e-10!131;UBERON:0009142!6.03e-10!131;UBERON:0005057!3.99e-09!51;UBERON:0002390!1.52e-08!45;UBERON:0003061!1.52e-08!45;UBERON:0004921!1.54e-08!126;UBERON:0004185!1.54e-08!126;UBERON:0001007!2.86e-08!128;UBERON:0001555!2.86e-08!128;UBERON:0007026!2.86e-08!128;UBERON:0003081!3.43e-08!88;UBERON:0004119!5.21e-08!130;UBERON:0000925!5.21e-08!130;UBERON:0006595!5.21e-08!130;UBERON:0001048!9.43e-08!147;UBERON:0002193!9.99e-08!48;UBERON:0000490!1.55e-07!66;UBERON:0000477!1.56e-07!154;UBERON:0000949!1.65e-07!72;UBERON:0000926!1.87e-07!193;UBERON:0004120!1.87e-07!193;UBERON:0006603!1.87e-07!193;UBERON:0003929!3.17e-07!55;UBERON:0002368!4.23e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002394,7.11e-12,1;UBERON:0001281,7.11e-12,1;UBERON:0000353,7.11e-12,1;UBERON:0003497,7.11e-12,1;UBERON:0003909,7.11e-12,1;UBERON:0003928,7.11e-12,1;UBERON:0003835,7.11e-12,1;UBERON:0003513,7.11e-12,1;UBERON:0001280,7.11e-12,1;UBERON:0004647,7.11e-12,1;UBERON:0002294,7.11e-12,1;UBERON:0001173,7.11e-12,1;UBERON:0004912,7.11e-12,1;UBERON:0005171,7.11e-12,1;UBERON:0002370,4.29e-08,23;UBERON:0000974,4.29e-08,23;UBERON:0004807,4.29e-08,23;UBERON:0005058,4.29e-08,23;UBERON:0003351,4.29e-08,23;UBERON:0009113,4.29e-08,23;UBERON:0003295,4.29e-08,23;UBERON:0009722,4.29e-08,23;UBERON:0005562,4.29e-08,23;UBERON:0007690,4.29e-08,23;UBERON:0000077,4.91e-08,35;UBERON:0006562,9.03e-08,24;UBERON:0003408,9.03e-08,24;UBERON:0001557,9.03e-08,24;UBERON:0001042,9.03e-08,24;UBERON:0008814,9.03e-08,24;UBERON:0009145,9.03e-08,24;UBERON:0000072,6.06e-07,27|phase1_expression=0,0,0,0,0,0,0,5.16493293766305,3.23814060948833,5.38348410540585,0,0.159544317990673,8.21763503669787,4.72070173062586,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,6.5282592781021,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.537080087002444,0.993406773906324,0.240390899039938,0.147689527174577,0.807731599585181,0.533447646584999,0.604957110821043,0.292373642219257,0.577271049841977,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:20525800..20525814,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:20525800..20525814,+ | |||
|id=chr7:20525800..20525814,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.27e-13!9;CL:0000789!2.27e-13!9;CL:0002420!2.27e-13!9;CL:0002419!2.27e-13!9;CL:0000790!2.27e-13!9;CL:0000624!1.18e-11!8;CL:0000084!1.33e-10!11;CL:0000827!1.33e-10!11;CL:0000838!1.44e-09!12;CL:0000542!1.08e-08!13;CL:0000051!1.08e-08!13;CL:0000893!3.82e-08!6;CL:0002489!3.82e-08!6;CL:0000898!3.82e-08!6;CL:0000809!3.82e-08!6;CL:0000810!3.82e-08!6;CL:0000895!3.82e-08!6;CL:0000808!3.82e-08!6;CL:0000894!3.82e-08!6;CL:0000806!3.82e-08!6;CL:0000807!3.82e-08!6;CL:0000805!3.82e-08!6;CL:0002425!3.82e-08!6;CL:0002436!3.82e-08!6;CL:0002427!3.82e-08!6;CL:0002428!3.82e-08!6;CL:0002429!3.82e-08!6;CL:0002433!3.82e-08!6;CL:0002431!3.82e-08!6;CL:0002432!3.82e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-59,9;CL:0000789,2.18e-59,9;CL:0002420,2.18e-59,9;CL:0002419,2.18e-59,9;CL:0000790,2.18e-59,9;CL:0000624,1.79e-49,8;CL:0000084,1.18e-48,11;CL:0000827,1.18e-48,11;CL:0000838,1.26e-44,12;CL:0000542,3.24e-41,13;CL:0000051,3.24e-41,13;CL:0000738,1.40e-31,17;CL:0002087,1.40e-31,17;CL:0000893,1.03e-29,6;CL:0002489,1.03e-29,6;CL:0000898,1.03e-29,6;CL:0000809,1.03e-29,6;CL:0000810,1.03e-29,6;CL:0000895,1.03e-29,6;CL:0000808,1.03e-29,6;CL:0000894,1.03e-29,6;CL:0000806,1.03e-29,6;CL:0000807,1.03e-29,6;CL:0000805,1.03e-29,6;CL:0002425,1.03e-29,6;CL:0002436,1.03e-29,6;CL:0002427,1.03e-29,6;CL:0002428,1.03e-29,6;CL:0002429,1.03e-29,6;CL:0002433,1.03e-29,6;CL:0002431,1.03e-29,6;CL:0002432,1.03e-29,6;CL:0002031,1.57e-21,25;CL:0000988,7.62e-17,32;CL:0002032,7.62e-17,32;CL:0000037,7.62e-17,32;CL:0000837,7.62e-17,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,2.59e-12,1;CL:0000792,2.59e-12,1;CL:0000625,5.53e-12,1;CL:0000213,7.11e-12,1;CL:0002078,7.11e-12,1;CL:0000115,7.11e-12,1;CL:0002262,7.11e-12,1;CL:1000398,7.11e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!3.16e-21!41;UBERON:0001004!1.49e-20!42;UBERON:0002370!1.01e-16!23;UBERON:0000974!1.01e-16!23;UBERON:0004807!1.01e-16!23;UBERON:0005058!1.01e-16!23;UBERON:0003351!1.01e-16!23;UBERON:0009113!1.01e-16!23;UBERON:0003295!1.01e-16!23;UBERON:0009722!1.01e-16!23;UBERON:0005562!1.01e-16!23;UBERON:0007690!1.01e-16!23;UBERON:0004177!6.68e-16!29;UBERON:0006562!7.70e-16!24;UBERON:0003408!7.70e-16!24;UBERON:0001557!7.70e-16!24;UBERON:0001042!7.70e-16!24;UBERON:0008814!7.70e-16!24;UBERON:0009145!7.70e-16!24;UBERON:0000072!1.64e-15!27;UBERON:0001041!8.20e-14!92;UBERON:0000077!1.21e-12!97;UBERON:0005911!3.84e-12!69;UBERON:0000063!6.54e-11!35;UBERON:0003104!6.03e-10!131;UBERON:0009142!6.03e-10!131;UBERON:0005057!3.99e-09!51;UBERON:0002390!1.52e-08!45;UBERON:0003061!1.52e-08!45;UBERON:0004921!1.54e-08!126;UBERON:0004185!1.54e-08!126;UBERON:0001007!2.86e-08!128;UBERON:0001555!2.86e-08!128;UBERON:0007026!2.86e-08!128;UBERON:0003081!3.43e-08!88;UBERON:0004119!5.21e-08!130;UBERON:0000925!5.21e-08!130;UBERON:0006595!5.21e-08!130;UBERON:0001048!9.43e-08!147;UBERON:0002193!9.99e-08!48;UBERON:0000490!1.55e-07!66;UBERON:0000477!1.56e-07!154;UBERON:0000949!1.65e-07!72;UBERON:0000926!1.87e-07!193;UBERON:0004120!1.87e-07!193;UBERON:0006603!1.87e-07!193;UBERON:0003929!3.17e-07!55;UBERON:0002368!4.23e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-15,46;UBERON:0002394,7.11e-12,1;UBERON:0001281,7.11e-12,1;UBERON:0000353,7.11e-12,1;UBERON:0003497,7.11e-12,1;UBERON:0003909,7.11e-12,1;UBERON:0003928,7.11e-12,1;UBERON:0003835,7.11e-12,1;UBERON:0003513,7.11e-12,1;UBERON:0001280,7.11e-12,1;UBERON:0004647,7.11e-12,1;UBERON:0002294,7.11e-12,1;UBERON:0001173,7.11e-12,1;UBERON:0004912,7.11e-12,1;UBERON:0005171,7.11e-12,1;UBERON:0002370,4.29e-08,23;UBERON:0000974,4.29e-08,23;UBERON:0004807,4.29e-08,23;UBERON:0005058,4.29e-08,23;UBERON:0003351,4.29e-08,23;UBERON:0009113,4.29e-08,23;UBERON:0003295,4.29e-08,23;UBERON:0009722,4.29e-08,23;UBERON:0005562,4.29e-08,23;UBERON:0007690,4.29e-08,23;UBERON:0000077,4.91e-08,35;UBERON:0006562,9.03e-08,24;UBERON:0003408,9.03e-08,24;UBERON:0001557,9.03e-08,24;UBERON:0001042,9.03e-08,24;UBERON:0008814,9.03e-08,24;UBERON:0009145,9.03e-08,24;UBERON:0000072,6.06e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,5.16493293766305,3.23814060948833,5.38348410540585,0,0.159544317990673,8.21763503669787,4.72070173062586,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,6.5282592781021,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.537080087002444,0.993406773906324,0.240390899039938,0.147689527174577,0.807731599585181,0.533447646584999,0.604957110821043,0.292373642219257,0.577271049841977,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:20525800..20525814,+ | |||
}} |
Revision as of 12:45, 14 September 2013
Short description: | p@chr7:20525800..20525814, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20525800..20525814, + |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.33e-15 | 46 |
bile duct | 7.11e-12 | 1 |
hepatic sinusoid | 7.11e-12 | 1 |
parenchyma | 7.11e-12 | 1 |
abdomen blood vessel | 7.11e-12 | 1 |
sinusoid | 7.11e-12 | 1 |
digestive system duct | 7.11e-12 | 1 |
abdominal segment blood vessel | 7.11e-12 | 1 |
trunk blood vessel | 7.11e-12 | 1 |
liver parenchyma | 7.11e-12 | 1 |
liver lobule | 7.11e-12 | 1 |
biliary system | 7.11e-12 | 1 |
biliary tree | 7.11e-12 | 1 |
biliary bud | 7.11e-12 | 1 |
hepatic duct | 7.11e-12 | 1 |
thymus | 4.29e-08 | 23 |
neck | 4.29e-08 | 23 |
respiratory system epithelium | 4.29e-08 | 23 |
hemolymphoid system gland | 4.29e-08 | 23 |
pharyngeal epithelium | 4.29e-08 | 23 |
thymic region | 4.29e-08 | 23 |
pharyngeal gland | 4.29e-08 | 23 |
entire pharyngeal arch endoderm | 4.29e-08 | 23 |
thymus primordium | 4.29e-08 | 23 |
early pharyngeal endoderm | 4.29e-08 | 23 |
mixed endoderm/mesoderm-derived structure | 4.91e-08 | 35 |
pharynx | 9.03e-08 | 24 |
gland of gut | 9.03e-08 | 24 |
upper respiratory tract | 9.03e-08 | 24 |
chordate pharynx | 9.03e-08 | 24 |
pharyngeal arch system | 9.03e-08 | 24 |
pharyngeal region of foregut | 9.03e-08 | 24 |
segment of respiratory tract | 6.06e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.