FFCP PHASE1:Mm9::chr7:58877403..58877419,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=140919|HGNC=|MCL_coexpression_id=159|UniProt=Q8BLE7|association_with_transcript=203bp_to_ENSMUST00000032710,NM_080853,uc009hcf.2_5end|description=CAGE_peak_2_at_Slc17a6_5end|id=chr7:58877403..58877419,+|ontology_enrichment_celltype=CL:0000117!9.73e-20!23;CL:0000337!9.73e-20!23;CL:0000540!6.40e-12!33;CL:0000047!6.40e-12!33;CL:0000031!6.40e-12!33;CL:0000404!6.40e-12!33;CL:0000221!3.00e-09!44;CL:0000133!3.00e-09!44;CL:0000393!8.36e-09!39;CL:0000211!8.36e-09!39;CL:0002319!8.62e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-32,23;CL:0000337,1.34e-32,23;CL:0000540,5.03e-21,33;CL:0000047,5.03e-21,33;CL:0000031,5.03e-21,33;CL:0000404,5.03e-21,33;CL:0000393,6.05e-17,39;CL:0000211,6.05e-17,39;CL:0002319,7.28e-15,43;CL:0000221,2.10e-14,44;CL:0000133,2.10e-14,44;CL:0002612,8.96e-08,3;CL:0002614,2.57e-07,3;CL:0000120,3.40e-07,3;CL:0002321,3.77e-07,70;CL:0002610,4.28e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.07e-24!63;UBERON:0001049!1.61e-24!52;UBERON:0005068!1.61e-24!52;UBERON:0006241!1.61e-24!52;UBERON:0007135!1.61e-24!52;UBERON:0000073!1.22e-23!75;UBERON:0001016!1.22e-23!75;UBERON:0001017!1.42e-22!73;UBERON:0005743!1.42e-22!73;UBERON:0000955!3.42e-22!50;UBERON:0006238!3.42e-22!50;UBERON:0002616!1.94e-21!49;UBERON:0002346!4.17e-21!71;UBERON:0003075!4.17e-21!71;UBERON:0007284!4.17e-21!71;UBERON:0003056!2.59e-20!49;UBERON:0004121!1.79e-19!102;UBERON:0000924!1.79e-19!102;UBERON:0006601!1.79e-19!102;UBERON:0002020!9.20e-19!34;UBERON:0003080!1.70e-17!40;UBERON:0002780!1.46e-16!39;UBERON:0001890!1.46e-16!39;UBERON:0006240!1.46e-16!39;UBERON:0007811!8.85e-15!86;UBERON:0002791!6.27e-14!29;UBERON:0003528!6.27e-14!29;UBERON:0001893!6.27e-14!29;UBERON:0000153!4.12e-12!94;UBERON:0000956!5.37e-08!21;UBERON:0001869!5.37e-08!21;UBERON:0000203!5.37e-08!21;UBERON:0002420!7.49e-08!8;UBERON:0007245!7.49e-08!8;UBERON:0010009!7.49e-08!8;UBERON:0010011!7.49e-08!8;UBERON:0000454!7.49e-08!8;UBERON:0003076!1.18e-07!12;UBERON:0003057!1.18e-07!12;UBERON:0002240!1.59e-07!6;UBERON:0005174!1.59e-07!6;UBERON:0001137!1.59e-07!6;UBERON:0002298!2.51e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-21,73;UBERON:0000073,1.73e-21,54;UBERON:0001016,7.96e-21,75;UBERON:0001049,1.07e-18,52;UBERON:0005068,1.07e-18,52;UBERON:0006241,1.07e-18,52;UBERON:0007135,1.07e-18,52;UBERON:0004121,7.43e-16,95;UBERON:0000924,7.43e-16,95;UBERON:0006601,7.43e-16,95;UBERON:0002346,3.01e-15,64;UBERON:0003075,3.01e-15,64;UBERON:0007284,3.01e-15,64;UBERON:0002020,3.27e-15,34;UBERON:0002240,3.10e-13,6;UBERON:0005174,3.10e-13,6;UBERON:0001137,3.10e-13,6;UBERON:0010371,1.55e-12,73;UBERON:0000955,5.54e-12,47;UBERON:0006238,5.54e-12,47;UBERON:0001948,1.90e-11,5;UBERON:0002315,1.90e-11,5;UBERON:0002616,4.77e-11,46;UBERON:0003076,1.20e-10,12;UBERON:0003057,1.20e-10,12;UBERON:0003080,2.89e-10,40;UBERON:0002950,2.85e-09,4;UBERON:0001891,2.85e-09,4;UBERON:0009616,2.85e-09,4;UBERON:0010286,2.85e-09,4;UBERON:0002780,3.91e-09,39;UBERON:0001890,3.91e-09,39;UBERON:0006240,3.91e-09,39;UBERON:0002420,4.23e-09,8;UBERON:0007245,4.23e-09,8;UBERON:0010009,4.23e-09,8;UBERON:0010011,4.23e-09,8;UBERON:0000454,4.23e-09,8;UBERON:0003056,1.14e-08,49;UBERON:0010314,1.35e-08,92;UBERON:0003528,1.49e-08,29;UBERON:0002791,1.49e-08,29;UBERON:0001893,1.49e-08,29;UBERON:0002257,8.96e-08,3;UBERON:0002038,2.57e-07,3;UBERON:0009663,2.57e-07,3;UBERON:0009661,2.57e-07,3;UBERON:0000125,2.57e-07,3;UBERON:0002308,2.57e-07,3;UBERON:0004684,4.28e-07,3;UBERON:0002275,4.28e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,7.40587370980846,5.07065122804943,0,0,0,0,0,0,0,1.8664130215526,1.62007125998029,1.05162480675691,5.99867067247988,3.97563373712904,0.489963196859816,0.575072826109418,0,2.20231761998777,6.63974158042976,5.52983519722476,3.95658863190582,2.74462930807229,3.64639359389732,5.02529398202486,6.75315132038016,4.5839474333043,9.42811473515737,12.9558229527184,7.64237727883732,0.227178579999552,0.906858721281426,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,6.5907881338122,0.915001205637253,0.251308704225729,0.521472960576829,0.511430914660661,4.57133698031032,2.43361894601636,0,0,0,0.210441855886474,0,0.689706313300419,0.540186389416048,0.30140963567143,0.204109497453984,0.384341160854549,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,1.81003922662333,0,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0.572895513439397,0.515559547031063,2.74033007908257,1.5107877947794,1.35004500046361,0.45032120322422,0.906284817968409,0,0.726511433089237,0.798049746802062,1.02440163452481,0.486213434136588,0.209613162627982,0.919217542250071,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.25347929989024,1.13175804831646,0.749132059759059,1.02440243847791,1.32101578597911,1.42888107384922,1.15884325944855,0.964546102318525,1.23625770240992,0.883193520806384,1.02860775715625,0.887379030796687,2.14592570952589,0.581385666529314,0.941093804153306,0.592302255241736,0.182927972872773,1.8414879800649,1.35804113845862,1.68342681497322,0.355905054372522,0.689531376628944,1.22769312950907,0.464810523557898,0.771626443924566,0.499621155875892,1.40358965067245,0.214871054048298,1.14772999241306,0.220591419119515,0.463735671240843|short_description=p2@Slc17a6}} | ||
|EntrezGene=140919 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt=Q8BLE7 | |||
|association_with_transcript=203bp_to_ENSMUST00000032710,NM_080853,uc009hcf.2_5end | |||
|description=CAGE_peak_2_at_Slc17a6_5end | |||
|id=chr7:58877403..58877419,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.73e-20!23;CL:0000337!9.73e-20!23;CL:0000540!6.40e-12!33;CL:0000047!6.40e-12!33;CL:0000031!6.40e-12!33;CL:0000404!6.40e-12!33;CL:0000221!3.00e-09!44;CL:0000133!3.00e-09!44;CL:0000393!8.36e-09!39;CL:0000211!8.36e-09!39;CL:0002319!8.62e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-32,23;CL:0000337,1.34e-32,23;CL:0000540,5.03e-21,33;CL:0000047,5.03e-21,33;CL:0000031,5.03e-21,33;CL:0000404,5.03e-21,33;CL:0000393,6.05e-17,39;CL:0000211,6.05e-17,39;CL:0002319,7.28e-15,43;CL:0000221,2.10e-14,44;CL:0000133,2.10e-14,44;CL:0002612,8.96e-08,3;CL:0002614,2.57e-07,3;CL:0000120,3.40e-07,3;CL:0002321,3.77e-07,70;CL:0002610,4.28e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.07e-24!63;UBERON:0001049!1.61e-24!52;UBERON:0005068!1.61e-24!52;UBERON:0006241!1.61e-24!52;UBERON:0007135!1.61e-24!52;UBERON:0000073!1.22e-23!75;UBERON:0001016!1.22e-23!75;UBERON:0001017!1.42e-22!73;UBERON:0005743!1.42e-22!73;UBERON:0000955!3.42e-22!50;UBERON:0006238!3.42e-22!50;UBERON:0002616!1.94e-21!49;UBERON:0002346!4.17e-21!71;UBERON:0003075!4.17e-21!71;UBERON:0007284!4.17e-21!71;UBERON:0003056!2.59e-20!49;UBERON:0004121!1.79e-19!102;UBERON:0000924!1.79e-19!102;UBERON:0006601!1.79e-19!102;UBERON:0002020!9.20e-19!34;UBERON:0003080!1.70e-17!40;UBERON:0002780!1.46e-16!39;UBERON:0001890!1.46e-16!39;UBERON:0006240!1.46e-16!39;UBERON:0007811!8.85e-15!86;UBERON:0002791!6.27e-14!29;UBERON:0003528!6.27e-14!29;UBERON:0001893!6.27e-14!29;UBERON:0000153!4.12e-12!94;UBERON:0000956!5.37e-08!21;UBERON:0001869!5.37e-08!21;UBERON:0000203!5.37e-08!21;UBERON:0002420!7.49e-08!8;UBERON:0007245!7.49e-08!8;UBERON:0010009!7.49e-08!8;UBERON:0010011!7.49e-08!8;UBERON:0000454!7.49e-08!8;UBERON:0003076!1.18e-07!12;UBERON:0003057!1.18e-07!12;UBERON:0002240!1.59e-07!6;UBERON:0005174!1.59e-07!6;UBERON:0001137!1.59e-07!6;UBERON:0002298!2.51e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-21,73;UBERON:0000073,1.73e-21,54;UBERON:0001016,7.96e-21,75;UBERON:0001049,1.07e-18,52;UBERON:0005068,1.07e-18,52;UBERON:0006241,1.07e-18,52;UBERON:0007135,1.07e-18,52;UBERON:0004121,7.43e-16,95;UBERON:0000924,7.43e-16,95;UBERON:0006601,7.43e-16,95;UBERON:0002346,3.01e-15,64;UBERON:0003075,3.01e-15,64;UBERON:0007284,3.01e-15,64;UBERON:0002020,3.27e-15,34;UBERON:0002240,3.10e-13,6;UBERON:0005174,3.10e-13,6;UBERON:0001137,3.10e-13,6;UBERON:0010371,1.55e-12,73;UBERON:0000955,5.54e-12,47;UBERON:0006238,5.54e-12,47;UBERON:0001948,1.90e-11,5;UBERON:0002315,1.90e-11,5;UBERON:0002616,4.77e-11,46;UBERON:0003076,1.20e-10,12;UBERON:0003057,1.20e-10,12;UBERON:0003080,2.89e-10,40;UBERON:0002950,2.85e-09,4;UBERON:0001891,2.85e-09,4;UBERON:0009616,2.85e-09,4;UBERON:0010286,2.85e-09,4;UBERON:0002780,3.91e-09,39;UBERON:0001890,3.91e-09,39;UBERON:0006240,3.91e-09,39;UBERON:0002420,4.23e-09,8;UBERON:0007245,4.23e-09,8;UBERON:0010009,4.23e-09,8;UBERON:0010011,4.23e-09,8;UBERON:0000454,4.23e-09,8;UBERON:0003056,1.14e-08,49;UBERON:0010314,1.35e-08,92;UBERON:0003528,1.49e-08,29;UBERON:0002791,1.49e-08,29;UBERON:0001893,1.49e-08,29;UBERON:0002257,8.96e-08,3;UBERON:0002038,2.57e-07,3;UBERON:0009663,2.57e-07,3;UBERON:0009661,2.57e-07,3;UBERON:0000125,2.57e-07,3;UBERON:0002308,2.57e-07,3;UBERON:0004684,4.28e-07,3;UBERON:0002275,4.28e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,7.40587370980846,5.07065122804943,0,0,0,0,0,0,0,1.8664130215526,1.62007125998029,1.05162480675691,5.99867067247988,3.97563373712904,0.489963196859816,0.575072826109418,0,2.20231761998777,6.63974158042976,5.52983519722476,3.95658863190582,2.74462930807229,3.64639359389732,5.02529398202486,6.75315132038016,4.5839474333043,9.42811473515737,12.9558229527184,7.64237727883732,0.227178579999552,0.906858721281426,0,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,6.5907881338122,0.915001205637253,0.251308704225729,0.521472960576829,0.511430914660661,4.57133698031032,2.43361894601636,0,0,0,0.210441855886474,0,0.689706313300419,0.540186389416048,0.30140963567143,0.204109497453984,0.384341160854549,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,1.81003922662333,0,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.84130094602871,0.572895513439397,0.515559547031063,2.74033007908257,1.5107877947794,1.35004500046361,0.45032120322422,0.906284817968409,0,0.726511433089237,0.798049746802062,1.02440163452481,0.486213434136588,0.209613162627982,0.919217542250071,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.25347929989024,1.13175804831646,0.749132059759059,1.02440243847791,1.32101578597911,1.42888107384922,1.15884325944855,0.964546102318525,1.23625770240992,0.883193520806384,1.02860775715625,0.887379030796687,2.14592570952589,0.581385666529314,0.941093804153306,0.592302255241736,0.182927972872773,1.8414879800649,1.35804113845862,1.68342681497322,0.355905054372522,0.689531376628944,1.22769312950907,0.464810523557898,0.771626443924566,0.499621155875892,1.40358965067245,0.214871054048298,1.14772999241306,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Slc17a6 | |||
}} |
Revision as of 13:56, 14 September 2013
Short description: | p2@Slc17a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc17a6_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 203bp_to_ENSMUST00000032710, NM_080853, uc009hcf.2_5end |
EntrezGene: | Slc17a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-32 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-32 | 23 |
neuron | 5.03e-21 | 33 |
neuronal stem cell | 5.03e-21 | 33 |
neuroblast | 5.03e-21 | 33 |
electrically signaling cell | 5.03e-21 | 33 |
electrically responsive cell | 6.05e-17 | 39 |
electrically active cell | 6.05e-17 | 39 |
neural cell | 7.28e-15 | 43 |
ectodermal cell | 2.10e-14 | 44 |
neurectodermal cell | 2.10e-14 | 44 |
neuron of the ventral spinal cord | 8.96e-08 | 3 |
neuron of the substantia nigra | 2.57e-07 | 3 |
granule cell | 3.40e-07 | 3 |
embryonic cell | 3.77e-07 | 70 |
raphe nuclei neuron | 4.28e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.