FFCP PHASE1:Mm9::chr7:64765286..64765346,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110886|HGNC=|MCL_coexpression_id=705|UniProt=Q8BHJ7|association_with_transcript=32bp_to_ENSMUST00000068456,NM_176942,uc009heb.1_5end|description=CAGE_peak_1_at_Gabra5_5end|id=chr7:64765286..64765346,-|ontology_enrichment_celltype=CL:0000117!6.81e-17!23;CL:0000337!6.81e-17!23;CL:0000540!1.06e-10!33;CL:0000047!1.06e-10!33;CL:0000031!1.06e-10!33;CL:0000404!1.06e-10!33;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39;CL:0000221!1.70e-07!44;CL:0000133!1.70e-07!44;CL:0002319!3.12e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-21,23;CL:0000337,3.55e-21,23;CL:0000540,1.25e-12,33;CL:0000047,1.25e-12,33;CL:0000031,1.25e-12,33;CL:0000404,1.25e-12,33;CL:0000393,1.12e-09,39;CL:0000211,1.12e-09,39;CL:0002319,3.41e-08,43;CL:0000221,7.20e-08,44;CL:0000133,7.20e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.27e-28!52;UBERON:0005068!4.27e-28!52;UBERON:0006241!4.27e-28!52;UBERON:0007135!4.27e-28!52;UBERON:0000955!7.75e-26!50;UBERON:0006238!7.75e-26!50;UBERON:0001017!4.09e-25!73;UBERON:0005743!4.09e-25!73;UBERON:0002616!7.78e-25!49;UBERON:0000073!1.25e-24!75;UBERON:0001016!1.25e-24!75;UBERON:0002020!1.39e-24!34;UBERON:0000033!3.02e-24!63;UBERON:0003080!3.49e-23!40;UBERON:0002780!2.76e-22!39;UBERON:0001890!2.76e-22!39;UBERON:0006240!2.76e-22!39;UBERON:0003056!4.25e-22!49;UBERON:0002346!1.55e-20!71;UBERON:0003075!1.55e-20!71;UBERON:0007284!1.55e-20!71;UBERON:0002791!5.65e-20!29;UBERON:0003528!5.65e-20!29;UBERON:0001893!5.65e-20!29;UBERON:0004121!4.10e-17!102;UBERON:0000924!4.10e-17!102;UBERON:0006601!4.10e-17!102;UBERON:0000956!9.06e-14!21;UBERON:0001869!9.06e-14!21;UBERON:0000203!9.06e-14!21;UBERON:0007811!3.12e-13!86;UBERON:0000153!7.88e-13!94;UBERON:0002619!7.44e-12!17;UBERON:0002021!2.38e-09!10;UBERON:0000411!2.38e-09!10;UBERON:0001950!2.38e-09!10;UBERON:0002420!1.97e-07!8;UBERON:0007245!1.97e-07!8;UBERON:0010009!1.97e-07!8;UBERON:0010011!1.97e-07!8;UBERON:0000454!1.97e-07!8;UBERON:0002240!8.93e-07!6;UBERON:0005174!8.93e-07!6;UBERON:0001137!8.93e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.64e-31,34;UBERON:0000073,2.23e-28,54;UBERON:0001049,1.45e-26,52;UBERON:0005068,1.45e-26,52;UBERON:0006241,1.45e-26,52;UBERON:0007135,1.45e-26,52;UBERON:0001017,1.23e-24,73;UBERON:0003528,1.67e-24,29;UBERON:0002791,1.67e-24,29;UBERON:0001893,1.67e-24,29;UBERON:0001016,1.36e-23,75;UBERON:0000955,6.24e-21,47;UBERON:0006238,6.24e-21,47;UBERON:0003080,2.02e-20,40;UBERON:0002616,9.28e-20,46;UBERON:0002780,2.51e-19,39;UBERON:0001890,2.51e-19,39;UBERON:0006240,2.51e-19,39;UBERON:0002346,2.98e-19,64;UBERON:0003075,2.98e-19,64;UBERON:0007284,2.98e-19,64;UBERON:0000956,4.66e-16,21;UBERON:0001869,4.66e-16,21;UBERON:0000203,4.66e-16,21;UBERON:0004121,1.16e-15,95;UBERON:0000924,1.16e-15,95;UBERON:0006601,1.16e-15,95;UBERON:0010371,2.14e-15,73;UBERON:0003056,6.47e-15,49;UBERON:0002619,7.43e-15,17;UBERON:0002021,2.41e-12,10;UBERON:0000411,2.41e-12,10;UBERON:0001950,2.41e-12,10;UBERON:0010314,7.23e-10,92;UBERON:0002420,1.07e-09,8;UBERON:0007245,1.07e-09,8;UBERON:0010009,1.07e-09,8;UBERON:0010011,1.07e-09,8;UBERON:0000454,1.07e-09,8;UBERON:0002240,8.65e-09,6;UBERON:0005174,8.65e-09,6;UBERON:0001137,8.65e-09,6;UBERON:0001948,1.64e-07,5;UBERON:0002315,1.64e-07,5;UBERON:0000369,9.51e-07,5;UBERON:0002435,9.51e-07,5;UBERON:0000204,9.51e-07,5;UBERON:0010082,9.51e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.65327859977075,4.23192783417626,8.23980824558033,0,0.889294796111139,0,0,0,0,0,1.24427534770173,1.21505344498522,0.630974884054146,21.7094748146891,21.2033799313549,4.04219637409348,2.30029130443767,9.19218786610021,8.8092704799511,8.2996769755372,8.44835932909339,6.85808696197008,9.05727671663856,7.8137005583514,6.14202597803038,7.87867654044352,16.0438160165651,21.2132581541041,20.786265396669,8.57437450796383,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,16.1773890557209,12.8100168789215,28.5235379296202,25.2045264278801,18.6672283851141,9.97382613885888,12.8170597823529,0.203678727700633,0,0,0,0,0.689706313300419,0.360124259610698,0,0.272145996605311,0.512454881139399,0.281105173679186,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,71.2882925632391,26.034866931959,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,20.2293743384618,12.7760738385501,0,0,0,0,0,0,0.445597348164788,0,0,0,0,34.0600595407115,0.141940085208269,0.35613120733451,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,22.0656109392507,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,17.9526842237799,19.4784474569395,12.5452823110892,10.9613203163303,9.06472676867641,14.1754725048679,10.3573876741571,12.6879874515577,7.7664046762773,0.103787347584177,0.399024873401031,0.682934423016537,1.45864030240976,1.46729213839588,2.02227859295016,2.66696073361938,2.47242068686673,2.24643446714271,2.52697211763797,2.02783439912192,3.2066478035633,2.90288673156635,2.36893063898016,2.69946704091382,3.33405583898152,2.89710814862139,2.70072908649187,3.70877310722976,2.50238164228475,1.37147700954166,1.95223386775271,1.1921809497366,2.90692833264657,1.88218760830661,2.19997980518359,2.56099162021882,1.05227884575137,2.03706170768793,2.80571135828869,2.72860541685601,2.26560309463796,2.86461730218783,2.01417893541756,2.89359916471712,3.74715866906919,1.16965804222704,0.644613162144895,1.14772999241306,0.661774257358546,0.231867835620421|short_description=p1@Gabra5}} | ||
|EntrezGene=110886 | |||
|HGNC= | |||
|MCL_coexpression_id=705 | |||
|UniProt=Q8BHJ7 | |||
|association_with_transcript=32bp_to_ENSMUST00000068456,NM_176942,uc009heb.1_5end | |||
|description=CAGE_peak_1_at_Gabra5_5end | |||
|id=chr7:64765286..64765346,- | |||
|ontology_enrichment_celltype=CL:0000117!6.81e-17!23;CL:0000337!6.81e-17!23;CL:0000540!1.06e-10!33;CL:0000047!1.06e-10!33;CL:0000031!1.06e-10!33;CL:0000404!1.06e-10!33;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39;CL:0000221!1.70e-07!44;CL:0000133!1.70e-07!44;CL:0002319!3.12e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-21,23;CL:0000337,3.55e-21,23;CL:0000540,1.25e-12,33;CL:0000047,1.25e-12,33;CL:0000031,1.25e-12,33;CL:0000404,1.25e-12,33;CL:0000393,1.12e-09,39;CL:0000211,1.12e-09,39;CL:0002319,3.41e-08,43;CL:0000221,7.20e-08,44;CL:0000133,7.20e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.27e-28!52;UBERON:0005068!4.27e-28!52;UBERON:0006241!4.27e-28!52;UBERON:0007135!4.27e-28!52;UBERON:0000955!7.75e-26!50;UBERON:0006238!7.75e-26!50;UBERON:0001017!4.09e-25!73;UBERON:0005743!4.09e-25!73;UBERON:0002616!7.78e-25!49;UBERON:0000073!1.25e-24!75;UBERON:0001016!1.25e-24!75;UBERON:0002020!1.39e-24!34;UBERON:0000033!3.02e-24!63;UBERON:0003080!3.49e-23!40;UBERON:0002780!2.76e-22!39;UBERON:0001890!2.76e-22!39;UBERON:0006240!2.76e-22!39;UBERON:0003056!4.25e-22!49;UBERON:0002346!1.55e-20!71;UBERON:0003075!1.55e-20!71;UBERON:0007284!1.55e-20!71;UBERON:0002791!5.65e-20!29;UBERON:0003528!5.65e-20!29;UBERON:0001893!5.65e-20!29;UBERON:0004121!4.10e-17!102;UBERON:0000924!4.10e-17!102;UBERON:0006601!4.10e-17!102;UBERON:0000956!9.06e-14!21;UBERON:0001869!9.06e-14!21;UBERON:0000203!9.06e-14!21;UBERON:0007811!3.12e-13!86;UBERON:0000153!7.88e-13!94;UBERON:0002619!7.44e-12!17;UBERON:0002021!2.38e-09!10;UBERON:0000411!2.38e-09!10;UBERON:0001950!2.38e-09!10;UBERON:0002420!1.97e-07!8;UBERON:0007245!1.97e-07!8;UBERON:0010009!1.97e-07!8;UBERON:0010011!1.97e-07!8;UBERON:0000454!1.97e-07!8;UBERON:0002240!8.93e-07!6;UBERON:0005174!8.93e-07!6;UBERON:0001137!8.93e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.64e-31,34;UBERON:0000073,2.23e-28,54;UBERON:0001049,1.45e-26,52;UBERON:0005068,1.45e-26,52;UBERON:0006241,1.45e-26,52;UBERON:0007135,1.45e-26,52;UBERON:0001017,1.23e-24,73;UBERON:0003528,1.67e-24,29;UBERON:0002791,1.67e-24,29;UBERON:0001893,1.67e-24,29;UBERON:0001016,1.36e-23,75;UBERON:0000955,6.24e-21,47;UBERON:0006238,6.24e-21,47;UBERON:0003080,2.02e-20,40;UBERON:0002616,9.28e-20,46;UBERON:0002780,2.51e-19,39;UBERON:0001890,2.51e-19,39;UBERON:0006240,2.51e-19,39;UBERON:0002346,2.98e-19,64;UBERON:0003075,2.98e-19,64;UBERON:0007284,2.98e-19,64;UBERON:0000956,4.66e-16,21;UBERON:0001869,4.66e-16,21;UBERON:0000203,4.66e-16,21;UBERON:0004121,1.16e-15,95;UBERON:0000924,1.16e-15,95;UBERON:0006601,1.16e-15,95;UBERON:0010371,2.14e-15,73;UBERON:0003056,6.47e-15,49;UBERON:0002619,7.43e-15,17;UBERON:0002021,2.41e-12,10;UBERON:0000411,2.41e-12,10;UBERON:0001950,2.41e-12,10;UBERON:0010314,7.23e-10,92;UBERON:0002420,1.07e-09,8;UBERON:0007245,1.07e-09,8;UBERON:0010009,1.07e-09,8;UBERON:0010011,1.07e-09,8;UBERON:0000454,1.07e-09,8;UBERON:0002240,8.65e-09,6;UBERON:0005174,8.65e-09,6;UBERON:0001137,8.65e-09,6;UBERON:0001948,1.64e-07,5;UBERON:0002315,1.64e-07,5;UBERON:0000369,9.51e-07,5;UBERON:0002435,9.51e-07,5;UBERON:0000204,9.51e-07,5;UBERON:0010082,9.51e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.65327859977075,4.23192783417626,8.23980824558033,0,0.889294796111139,0,0,0,0,0,1.24427534770173,1.21505344498522,0.630974884054146,21.7094748146891,21.2033799313549,4.04219637409348,2.30029130443767,9.19218786610021,8.8092704799511,8.2996769755372,8.44835932909339,6.85808696197008,9.05727671663856,7.8137005583514,6.14202597803038,7.87867654044352,16.0438160165651,21.2132581541041,20.786265396669,8.57437450796383,0,0.0755715601067855,0,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0,16.1773890557209,12.8100168789215,28.5235379296202,25.2045264278801,18.6672283851141,9.97382613885888,12.8170597823529,0.203678727700633,0,0,0,0,0.689706313300419,0.360124259610698,0,0.272145996605311,0.512454881139399,0.281105173679186,0.258703370739016,0,0.378212160335639,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,71.2882925632391,26.034866931959,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,20.2293743384618,12.7760738385501,0,0,0,0,0,0,0.445597348164788,0,0,0,0,34.0600595407115,0.141940085208269,0.35613120733451,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.709360934569094,0.891844088010353,0.493647061806363,0.304464949114599,0,0,0,0,0,0,0,0,0,22.0656109392507,0,0,0,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,17.9526842237799,19.4784474569395,12.5452823110892,10.9613203163303,9.06472676867641,14.1754725048679,10.3573876741571,12.6879874515577,7.7664046762773,0.103787347584177,0.399024873401031,0.682934423016537,1.45864030240976,1.46729213839588,2.02227859295016,2.66696073361938,2.47242068686673,2.24643446714271,2.52697211763797,2.02783439912192,3.2066478035633,2.90288673156635,2.36893063898016,2.69946704091382,3.33405583898152,2.89710814862139,2.70072908649187,3.70877310722976,2.50238164228475,1.37147700954166,1.95223386775271,1.1921809497366,2.90692833264657,1.88218760830661,2.19997980518359,2.56099162021882,1.05227884575137,2.03706170768793,2.80571135828869,2.72860541685601,2.26560309463796,2.86461730218783,2.01417893541756,2.89359916471712,3.74715866906919,1.16965804222704,0.644613162144895,1.14772999241306,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Gabra5 | |||
}} |
Revision as of 13:58, 14 September 2013
Short description: | p1@Gabra5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabra5_5end |
Coexpression cluster: | MCL_coexpression_mm9:705 |
Association with transcript: | 32bp_to_ENSMUST00000068456, NM_176942, uc009heb.1_5end |
EntrezGene: | Gabra5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.55e-21 | 23 |
neuroblast (sensu Vertebrata) | 3.55e-21 | 23 |
neuron | 1.25e-12 | 33 |
neuronal stem cell | 1.25e-12 | 33 |
neuroblast | 1.25e-12 | 33 |
electrically signaling cell | 1.25e-12 | 33 |
electrically responsive cell | 1.12e-09 | 39 |
electrically active cell | 1.12e-09 | 39 |
neural cell | 3.41e-08 | 43 |
ectodermal cell | 7.20e-08 | 44 |
neurectodermal cell | 7.20e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.