FFCP PHASE1:Mm9::chr8:107813020..107813038,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74356|HGNC=|MCL_coexpression_id=335|UniProt=|association_with_transcript=26bp_to_uc009ncf.1_5end|description=CAGE_peak_4_at_4931428F04Rik_5end|id=chr8:107813020..107813038,-|ontology_enrichment_celltype=CL:0000117!3.88e-16!23;CL:0000337!3.88e-16!23;CL:0000540!6.11e-10!33;CL:0000047!6.11e-10!33;CL:0000031!6.11e-10!33;CL:0000404!6.11e-10!33;CL:0000393!1.47e-07!39;CL:0000211!1.47e-07!39;CL:0002319!3.37e-07!43;CL:0000221!7.91e-07!44;CL:0000133!7.91e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,5.34e-24,23;CL:0000337,5.34e-24,23;CL:0000540,4.79e-15,33;CL:0000047,4.79e-15,33;CL:0000031,4.79e-15,33;CL:0000404,4.79e-15,33;CL:0000393,6.55e-12,39;CL:0000211,6.55e-12,39;CL:0002609,1.25e-10,6;CL:0002319,2.55e-10,43;CL:0000221,5.73e-10,44;CL:0000133,5.73e-10,44;CL:0000120,9.88e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.23e-24!52;UBERON:0005068!2.23e-24!52;UBERON:0006241!2.23e-24!52;UBERON:0007135!2.23e-24!52;UBERON:0002020!1.52e-23!34;UBERON:0003080!1.20e-20!40;UBERON:0002346!2.25e-20!71;UBERON:0003075!2.25e-20!71;UBERON:0007284!2.25e-20!71;UBERON:0002616!2.32e-20!49;UBERON:0003056!4.15e-20!49;UBERON:0002780!4.53e-20!39;UBERON:0001890!4.53e-20!39;UBERON:0006240!4.53e-20!39;UBERON:0002791!1.17e-19!29;UBERON:0003528!1.17e-19!29;UBERON:0001893!1.17e-19!29;UBERON:0000955!1.34e-19!50;UBERON:0006238!1.34e-19!50;UBERON:0000073!1.58e-19!75;UBERON:0001016!1.58e-19!75;UBERON:0001017!5.45e-19!73;UBERON:0005743!5.45e-19!73;UBERON:0000033!6.05e-18!63;UBERON:0004121!2.47e-14!102;UBERON:0000924!2.47e-14!102;UBERON:0006601!2.47e-14!102;UBERON:0000956!6.09e-14!21;UBERON:0001869!6.09e-14!21;UBERON:0000203!6.09e-14!21;UBERON:0002619!5.70e-11!17;UBERON:0007811!2.70e-10!86;UBERON:0000153!9.08e-10!94;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10;UBERON:0002420!6.48e-07!8;UBERON:0007245!6.48e-07!8;UBERON:0010009!6.48e-07!8;UBERON:0010011!6.48e-07!8;UBERON:0000454!6.48e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.25e-39,34;UBERON:0003528,7.12e-32,29;UBERON:0002791,7.12e-32,29;UBERON:0001893,7.12e-32,29;UBERON:0001049,3.72e-26,52;UBERON:0005068,3.72e-26,52;UBERON:0006241,3.72e-26,52;UBERON:0007135,3.72e-26,52;UBERON:0000073,7.47e-25,54;UBERON:0003080,8.73e-25,40;UBERON:0002780,9.45e-24,39;UBERON:0001890,9.45e-24,39;UBERON:0006240,9.45e-24,39;UBERON:0000956,7.48e-23,21;UBERON:0001869,7.48e-23,21;UBERON:0000203,7.48e-23,21;UBERON:0001017,9.55e-21,73;UBERON:0002616,1.52e-20,46;UBERON:0000955,6.04e-20,47;UBERON:0006238,6.04e-20,47;UBERON:0001016,6.17e-20,75;UBERON:0002346,1.42e-19,64;UBERON:0003075,1.42e-19,64;UBERON:0007284,1.42e-19,64;UBERON:0003056,8.06e-19,49;UBERON:0002619,3.78e-17,17;UBERON:0010371,4.48e-16,73;UBERON:0004121,9.75e-14,95;UBERON:0000924,9.75e-14,95;UBERON:0006601,9.75e-14,95;UBERON:0002021,3.43e-12,10;UBERON:0000411,3.43e-12,10;UBERON:0001950,3.43e-12,10;UBERON:0010314,5.47e-11,92;UBERON:0002420,6.21e-10,8;UBERON:0007245,6.21e-10,8;UBERON:0010009,6.21e-10,8;UBERON:0010011,6.21e-10,8;UBERON:0000454,6.21e-10,8;UBERON:0000369,1.82e-09,5;UBERON:0002435,1.82e-09,5;UBERON:0000204,1.82e-09,5;UBERON:0010082,1.82e-09,5;UBERON:0001948,1.67e-08,5;UBERON:0002315,1.67e-08,5;UBERON:0000025,2.65e-07,114;UBERON:0002240,5.35e-07,6;UBERON:0005174,5.35e-07,6;UBERON:0001137,5.35e-07,6|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,5.66486090406874,8.99284664762456,10.1413024560989,1.0165335962074,0,0,0,0,0,0,3.31806759387129,3.24014251996058,1.89292465216244,1.99955689082663,1.76694832761291,3.42974237801871,3.35459148563827,4.5960939330501,0,0.893811366596314,0.921639199537461,10.0233578674947,8.05091263701205,5.2091337055676,1.11673199600552,0.56276261003168,1.22238598221448,1.47314292736834,2.27794689278565,5.77838282058432,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.04853447583376,1.37250180845588,5.90575454930463,1.73824320192276,1.53429274398198,0.83115217823824,1.46017136760982,0,0,0,0,0,0.459804208866946,0.900310649026746,0.30140963567143,0.408218994907967,0.384341160854549,0.468508622798644,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,2.52347938276953,5.35103984372279,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0.388902376688095,0,0,0,0,0,0,10.3690802252832,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,2.30162618253588,2.86447756719698,1.54667864109319,0.685082519770642,2.2661816921691,4.05013500139084,2.70192721934532,2.26571204492102,1.03552062350364,0.31136204275253,0.798049746802062,1.19513524027894,0.486213434136588,0.419226325255965,0.919217542250071,0.44449345560323,0.824140228955577,0.962757628775446,1.51618327058278,0.50695859978048,0.188626341386076,1.12369808963859,1.02440243847791,1.32101578597911,0.476293691283074,1.0429589335037,0.578727661391115,1.23625770240992,1.03039244094078,0.342869252385415,0.70990322463735,1.1921809497366,0.872078499793971,1.2234219453993,0.930760686808441,1.09756783723664,1.05227884575137,1.49384525230448,1.68342681497322,0.949080144993393,0.591026894253381,1.63692417267876,0.77468420592983,0.385813221962283,2.49810577937946,0.467863216890817,1.07435527024149,0.57386499620653,0,0|short_description=p4@4931428F04Rik}} | ||
|EntrezGene=74356 | |||
|HGNC= | |||
|MCL_coexpression_id=335 | |||
|UniProt= | |||
|association_with_transcript=26bp_to_uc009ncf.1_5end | |||
|description=CAGE_peak_4_at_4931428F04Rik_5end | |||
|id=chr8:107813020..107813038,- | |||
|ontology_enrichment_celltype=CL:0000117!3.88e-16!23;CL:0000337!3.88e-16!23;CL:0000540!6.11e-10!33;CL:0000047!6.11e-10!33;CL:0000031!6.11e-10!33;CL:0000404!6.11e-10!33;CL:0000393!1.47e-07!39;CL:0000211!1.47e-07!39;CL:0002319!3.37e-07!43;CL:0000221!7.91e-07!44;CL:0000133!7.91e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.34e-24,23;CL:0000337,5.34e-24,23;CL:0000540,4.79e-15,33;CL:0000047,4.79e-15,33;CL:0000031,4.79e-15,33;CL:0000404,4.79e-15,33;CL:0000393,6.55e-12,39;CL:0000211,6.55e-12,39;CL:0002609,1.25e-10,6;CL:0002319,2.55e-10,43;CL:0000221,5.73e-10,44;CL:0000133,5.73e-10,44;CL:0000120,9.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.23e-24!52;UBERON:0005068!2.23e-24!52;UBERON:0006241!2.23e-24!52;UBERON:0007135!2.23e-24!52;UBERON:0002020!1.52e-23!34;UBERON:0003080!1.20e-20!40;UBERON:0002346!2.25e-20!71;UBERON:0003075!2.25e-20!71;UBERON:0007284!2.25e-20!71;UBERON:0002616!2.32e-20!49;UBERON:0003056!4.15e-20!49;UBERON:0002780!4.53e-20!39;UBERON:0001890!4.53e-20!39;UBERON:0006240!4.53e-20!39;UBERON:0002791!1.17e-19!29;UBERON:0003528!1.17e-19!29;UBERON:0001893!1.17e-19!29;UBERON:0000955!1.34e-19!50;UBERON:0006238!1.34e-19!50;UBERON:0000073!1.58e-19!75;UBERON:0001016!1.58e-19!75;UBERON:0001017!5.45e-19!73;UBERON:0005743!5.45e-19!73;UBERON:0000033!6.05e-18!63;UBERON:0004121!2.47e-14!102;UBERON:0000924!2.47e-14!102;UBERON:0006601!2.47e-14!102;UBERON:0000956!6.09e-14!21;UBERON:0001869!6.09e-14!21;UBERON:0000203!6.09e-14!21;UBERON:0002619!5.70e-11!17;UBERON:0007811!2.70e-10!86;UBERON:0000153!9.08e-10!94;UBERON:0002021!4.00e-08!10;UBERON:0000411!4.00e-08!10;UBERON:0001950!4.00e-08!10;UBERON:0002420!6.48e-07!8;UBERON:0007245!6.48e-07!8;UBERON:0010009!6.48e-07!8;UBERON:0010011!6.48e-07!8;UBERON:0000454!6.48e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.25e-39,34;UBERON:0003528,7.12e-32,29;UBERON:0002791,7.12e-32,29;UBERON:0001893,7.12e-32,29;UBERON:0001049,3.72e-26,52;UBERON:0005068,3.72e-26,52;UBERON:0006241,3.72e-26,52;UBERON:0007135,3.72e-26,52;UBERON:0000073,7.47e-25,54;UBERON:0003080,8.73e-25,40;UBERON:0002780,9.45e-24,39;UBERON:0001890,9.45e-24,39;UBERON:0006240,9.45e-24,39;UBERON:0000956,7.48e-23,21;UBERON:0001869,7.48e-23,21;UBERON:0000203,7.48e-23,21;UBERON:0001017,9.55e-21,73;UBERON:0002616,1.52e-20,46;UBERON:0000955,6.04e-20,47;UBERON:0006238,6.04e-20,47;UBERON:0001016,6.17e-20,75;UBERON:0002346,1.42e-19,64;UBERON:0003075,1.42e-19,64;UBERON:0007284,1.42e-19,64;UBERON:0003056,8.06e-19,49;UBERON:0002619,3.78e-17,17;UBERON:0010371,4.48e-16,73;UBERON:0004121,9.75e-14,95;UBERON:0000924,9.75e-14,95;UBERON:0006601,9.75e-14,95;UBERON:0002021,3.43e-12,10;UBERON:0000411,3.43e-12,10;UBERON:0001950,3.43e-12,10;UBERON:0010314,5.47e-11,92;UBERON:0002420,6.21e-10,8;UBERON:0007245,6.21e-10,8;UBERON:0010009,6.21e-10,8;UBERON:0010011,6.21e-10,8;UBERON:0000454,6.21e-10,8;UBERON:0000369,1.82e-09,5;UBERON:0002435,1.82e-09,5;UBERON:0000204,1.82e-09,5;UBERON:0010082,1.82e-09,5;UBERON:0001948,1.67e-08,5;UBERON:0002315,1.67e-08,5;UBERON:0000025,2.65e-07,114;UBERON:0002240,5.35e-07,6;UBERON:0005174,5.35e-07,6;UBERON:0001137,5.35e-07,6 | |||
|phase1_expression=0,0,0.454999239389536,0,0.500895729946347,0,0,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,5.66486090406874,8.99284664762456,10.1413024560989,1.0165335962074,0,0,0,0,0,0,3.31806759387129,3.24014251996058,1.89292465216244,1.99955689082663,1.76694832761291,3.42974237801871,3.35459148563827,4.5960939330501,0,0.893811366596314,0.921639199537461,10.0233578674947,8.05091263701205,5.2091337055676,1.11673199600552,0.56276261003168,1.22238598221448,1.47314292736834,2.27794689278565,5.77838282058432,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.04853447583376,1.37250180845588,5.90575454930463,1.73824320192276,1.53429274398198,0.83115217823824,1.46017136760982,0,0,0,0,0,0.459804208866946,0.900310649026746,0.30140963567143,0.408218994907967,0.384341160854549,0.468508622798644,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0.702213187313235,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,2.52347938276953,5.35103984372279,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.80275294993896,0.234423373184406,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.540183282093931,0.258717367565509,0.214337035031592,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0.388902376688095,0,0,0,0,0,0,10.3690802252832,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,2.30162618253588,2.86447756719698,1.54667864109319,0.685082519770642,2.2661816921691,4.05013500139084,2.70192721934532,2.26571204492102,1.03552062350364,0.31136204275253,0.798049746802062,1.19513524027894,0.486213434136588,0.419226325255965,0.919217542250071,0.44449345560323,0.824140228955577,0.962757628775446,1.51618327058278,0.50695859978048,0.188626341386076,1.12369808963859,1.02440243847791,1.32101578597911,0.476293691283074,1.0429589335037,0.578727661391115,1.23625770240992,1.03039244094078,0.342869252385415,0.70990322463735,1.1921809497366,0.872078499793971,1.2234219453993,0.930760686808441,1.09756783723664,1.05227884575137,1.49384525230448,1.68342681497322,0.949080144993393,0.591026894253381,1.63692417267876,0.77468420592983,0.385813221962283,2.49810577937946,0.467863216890817,1.07435527024149,0.57386499620653,0,0 | |||
|short_description=p4@4931428F04Rik | |||
}} |
Revision as of 14:35, 14 September 2013
Short description: | p4@4931428F04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_4931428F04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:335 |
Association with transcript: | 26bp_to_uc009ncf.1_5end |
EntrezGene: | 4931428F04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.34e-24 | 23 |
neuroblast (sensu Vertebrata) | 5.34e-24 | 23 |
neuron | 4.79e-15 | 33 |
neuronal stem cell | 4.79e-15 | 33 |
neuroblast | 4.79e-15 | 33 |
electrically signaling cell | 4.79e-15 | 33 |
electrically responsive cell | 6.55e-12 | 39 |
electrically active cell | 6.55e-12 | 39 |
neuron of cerebral cortex | 1.25e-10 | 6 |
neural cell | 2.55e-10 | 43 |
ectodermal cell | 5.73e-10 | 44 |
neurectodermal cell | 5.73e-10 | 44 |
granule cell | 9.88e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.