FFCP PHASE1:Mm9::chrX:45499636..45499659,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74131|HGNC=|MCL_coexpression_id=36|UniProt=Q8K352|association_with_transcript=23bp_to_ENSMUST00000033427_5end|description=CAGE_peak_2_at_Sash3_5end|id=chrX:45499636..45499659,+|ontology_enrichment_celltype=CL:0000988!6.56e-11!32;CL:0002032!6.56e-11!32;CL:0000037!6.56e-11!32;CL:0000566!6.56e-11!32;CL:0000837!6.56e-11!32;CL:0002031!3.57e-09!25;CL:0000738!3.26e-08!17;CL:0002087!3.26e-08!17;CL:0000838!1.25e-07!12;CL:0000084!4.18e-07!11;CL:0000827!4.18e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.76e-18,32;CL:0002032,1.76e-18,32;CL:0000037,1.76e-18,32;CL:0000837,1.76e-18,32;CL:0002031,3.36e-15,25;CL:0002320,1.42e-13,46;CL:0000134,1.42e-13,46;CL:0000738,1.50e-12,17;CL:0002087,1.50e-12,17;CL:0000838,5.64e-11,12;CL:0000084,3.65e-10,11;CL:0000827,3.65e-10,11;CL:0000219,4.98e-10,54;CL:0000049,7.27e-10,19;CL:0000542,8.03e-10,13;CL:0000051,8.03e-10,13;CL:0000791,1.83e-08,9;CL:0000789,1.83e-08,9;CL:0002420,1.83e-08,9;CL:0002419,1.83e-08,9;CL:0000790,1.83e-08,9;CL:0000763,6.94e-08,16;CL:0000624,1.19e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.44e-21!48;UBERON:0002390!4.02e-20!45;UBERON:0003061!4.02e-20!45;UBERON:0002405!5.98e-18!70;UBERON:0003081!2.45e-13!88;UBERON:0004177!1.07e-11!29;UBERON:0003408!2.83e-09!24;UBERON:0002371!2.98e-09!16;UBERON:0000926!4.35e-09!193;UBERON:0004120!4.35e-09!193;UBERON:0006603!4.35e-09!193;UBERON:0002370!4.38e-09!23;UBERON:0000974!4.38e-09!23;UBERON:0004807!4.38e-09!23;UBERON:0005058!4.38e-09!23;UBERON:0003351!4.38e-09!23;UBERON:0009113!4.38e-09!23;UBERON:0003295!4.38e-09!23;UBERON:0009722!4.38e-09!23;UBERON:0005562!4.38e-09!23;UBERON:0007690!4.38e-09!23;UBERON:0005057!5.28e-09!51;UBERON:0006562!6.38e-09!24;UBERON:0001557!6.38e-09!24;UBERON:0001042!6.38e-09!24;UBERON:0008814!6.38e-09!24;UBERON:0009145!6.38e-09!24;UBERON:0001474!8.30e-09!22;UBERON:0004765!8.30e-09!22;UBERON:0001434!8.30e-09!22;UBERON:0001004!7.83e-08!42;UBERON:0002204!1.22e-07!32;UBERON:0000065!1.27e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.51e-35,48;UBERON:0002405,8.51e-35,48;UBERON:0002390,1.58e-32,45;UBERON:0003061,1.58e-32,45;UBERON:0004177,3.07e-19,29;UBERON:0005057,3.07e-19,29;UBERON:0003081,3.67e-16,87;UBERON:0003408,2.10e-15,24;UBERON:0002370,3.97e-15,23;UBERON:0000974,3.97e-15,23;UBERON:0004807,3.97e-15,23;UBERON:0005058,3.97e-15,23;UBERON:0003351,3.97e-15,23;UBERON:0009113,3.97e-15,23;UBERON:0003295,3.97e-15,23;UBERON:0009722,3.97e-15,23;UBERON:0005562,3.97e-15,23;UBERON:0007690,3.97e-15,23;UBERON:0000077,2.80e-14,35;UBERON:0006562,3.50e-14,24;UBERON:0001557,3.50e-14,24;UBERON:0001042,3.50e-14,24;UBERON:0008814,3.50e-14,24;UBERON:0009145,3.50e-14,24;UBERON:0002384,1.42e-13,46;UBERON:0002371,1.74e-13,16;UBERON:0001474,1.95e-13,22;UBERON:0004765,1.95e-13,22;UBERON:0001434,1.95e-13,22;UBERON:0000072,8.66e-12,27;UBERON:0002204,5.38e-11,32;UBERON:0000926,9.07e-11,120;UBERON:0004120,9.07e-11,120;UBERON:0006603,9.07e-11,120;UBERON:0001004,2.67e-10,42;UBERON:0000065,5.57e-10,41;UBERON:0001041,5.80e-09,80;UBERON:0007811,7.73e-08,36;UBERON:0003929,4.69e-07,55;UBERON:0005911,4.91e-07,69|phase1_expression=0.160148847104794,0,0,0,0,0,0,28.4071311571468,3.37892933164,3.97909694747389,10.6155140299813,7.81767158154297,26.1937116794745,27.7122675668222,4.66353666541928,6.07425802169478,2.79824751251259,25.0792421459799,27.9713444555707,25.8877687596798,0.850432901510698,19.06386263057,19.0675846071423,4.31979541542198,5.50582274561208,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,26.7860243671621,25.0027310247616,22.5115209908733,35.8821207698919,30.0540013381716,42.2394007137104,0,0,0,0,0,0,0,0,0,14.5970867270231,11.6057942721815,15.7964085596958,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,18.8978940629094,33.6214563272771,22.0248835633291,10.7856039786626,3.45796474789399,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.227178579999552,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,1.48439043634778,14.2415836005944,0.593768556259299,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,1.01219549843938,7.96149496754887,1.13236794963186,4.19598885074748,4.363877278217,0,0.292780797011547,0,1.78819938646014,7.18890747035522,10.7982491578813,7.75128385145695,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0,0.712875546952214,4.97627882440372,1.0108910337347,0.210441855886474,0.390361328888111,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,9.83098462238529,6.69104558498259,6.53576048609863,0.207125772535502,0.703578179943289,0,0.473489471170421,0.787056926989615,0,0,0,0.467061369468678,0,0.1641674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| ||
|EntrezGene=74131 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q8K352 | |||
|association_with_transcript=23bp_to_ENSMUST00000033427_5end | |||
|description=CAGE_peak_2_at_Sash3_5end | |||
|id=chrX:45499636..45499659,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.56e-11!32;CL:0002032!6.56e-11!32;CL:0000037!6.56e-11!32;CL:0000566!6.56e-11!32;CL:0000837!6.56e-11!32;CL:0002031!3.57e-09!25;CL:0000738!3.26e-08!17;CL:0002087!3.26e-08!17;CL:0000838!1.25e-07!12;CL:0000084!4.18e-07!11;CL:0000827!4.18e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.76e-18,32;CL:0002032,1.76e-18,32;CL:0000037,1.76e-18,32;CL:0000837,1.76e-18,32;CL:0002031,3.36e-15,25;CL:0002320,1.42e-13,46;CL:0000134,1.42e-13,46;CL:0000738,1.50e-12,17;CL:0002087,1.50e-12,17;CL:0000838,5.64e-11,12;CL:0000084,3.65e-10,11;CL:0000827,3.65e-10,11;CL:0000219,4.98e-10,54;CL:0000049,7.27e-10,19;CL:0000542,8.03e-10,13;CL:0000051,8.03e-10,13;CL:0000791,1.83e-08,9;CL:0000789,1.83e-08,9;CL:0002420,1.83e-08,9;CL:0002419,1.83e-08,9;CL:0000790,1.83e-08,9;CL:0000763,6.94e-08,16;CL:0000624,1.19e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.44e-21!48;UBERON:0002390!4.02e-20!45;UBERON:0003061!4.02e-20!45;UBERON:0002405!5.98e-18!70;UBERON:0003081!2.45e-13!88;UBERON:0004177!1.07e-11!29;UBERON:0003408!2.83e-09!24;UBERON:0002371!2.98e-09!16;UBERON:0000926!4.35e-09!193;UBERON:0004120!4.35e-09!193;UBERON:0006603!4.35e-09!193;UBERON:0002370!4.38e-09!23;UBERON:0000974!4.38e-09!23;UBERON:0004807!4.38e-09!23;UBERON:0005058!4.38e-09!23;UBERON:0003351!4.38e-09!23;UBERON:0009113!4.38e-09!23;UBERON:0003295!4.38e-09!23;UBERON:0009722!4.38e-09!23;UBERON:0005562!4.38e-09!23;UBERON:0007690!4.38e-09!23;UBERON:0005057!5.28e-09!51;UBERON:0006562!6.38e-09!24;UBERON:0001557!6.38e-09!24;UBERON:0001042!6.38e-09!24;UBERON:0008814!6.38e-09!24;UBERON:0009145!6.38e-09!24;UBERON:0001474!8.30e-09!22;UBERON:0004765!8.30e-09!22;UBERON:0001434!8.30e-09!22;UBERON:0001004!7.83e-08!42;UBERON:0002204!1.22e-07!32;UBERON:0000065!1.27e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.51e-35,48;UBERON:0002405,8.51e-35,48;UBERON:0002390,1.58e-32,45;UBERON:0003061,1.58e-32,45;UBERON:0004177,3.07e-19,29;UBERON:0005057,3.07e-19,29;UBERON:0003081,3.67e-16,87;UBERON:0003408,2.10e-15,24;UBERON:0002370,3.97e-15,23;UBERON:0000974,3.97e-15,23;UBERON:0004807,3.97e-15,23;UBERON:0005058,3.97e-15,23;UBERON:0003351,3.97e-15,23;UBERON:0009113,3.97e-15,23;UBERON:0003295,3.97e-15,23;UBERON:0009722,3.97e-15,23;UBERON:0005562,3.97e-15,23;UBERON:0007690,3.97e-15,23;UBERON:0000077,2.80e-14,35;UBERON:0006562,3.50e-14,24;UBERON:0001557,3.50e-14,24;UBERON:0001042,3.50e-14,24;UBERON:0008814,3.50e-14,24;UBERON:0009145,3.50e-14,24;UBERON:0002384,1.42e-13,46;UBERON:0002371,1.74e-13,16;UBERON:0001474,1.95e-13,22;UBERON:0004765,1.95e-13,22;UBERON:0001434,1.95e-13,22;UBERON:0000072,8.66e-12,27;UBERON:0002204,5.38e-11,32;UBERON:0000926,9.07e-11,120;UBERON:0004120,9.07e-11,120;UBERON:0006603,9.07e-11,120;UBERON:0001004,2.67e-10,42;UBERON:0000065,5.57e-10,41;UBERON:0001041,5.80e-09,80;UBERON:0007811,7.73e-08,36;UBERON:0003929,4.69e-07,55;UBERON:0005911,4.91e-07,69 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,28.4071311571468,3.37892933164,3.97909694747389,10.6155140299813,7.81767158154297,26.1937116794745,27.7122675668222,4.66353666541928,6.07425802169478,2.79824751251259,25.0792421459799,27.9713444555707,25.8877687596798,0.850432901510698,19.06386263057,19.0675846071423,4.31979541542198,5.50582274561208,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,26.7860243671621,25.0027310247616,22.5115209908733,35.8821207698919,30.0540013381716,42.2394007137104,0,0,0,0,0,0,0,0,0,14.5970867270231,11.6057942721815,15.7964085596958,0.257259436035947,0.573066879877513,0.515672092277442,0,0,0,0,0,18.8978940629094,33.6214563272771,22.0248835633291,10.7856039786626,3.45796474789399,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0.255374676170375,0.614426133024974,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.227178579999552,0,0,0,0,0,0,0,2.66844398250329,0,0,0,0,0,0,0,0,0,0,1.48439043634778,14.2415836005944,0.593768556259299,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.352766121407114,0.251333182659351,0.247194967734374,1.01219549843938,7.96149496754887,1.13236794963186,4.19598885074748,4.363877278217,0,0.292780797011547,0,1.78819938646014,7.18890747035522,10.7982491578813,7.75128385145695,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0,0,0.712875546952214,4.97627882440372,1.0108910337347,0.210441855886474,0.390361328888111,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,9.83098462238529,6.69104558498259,6.53576048609863,0.207125772535502,0.703578179943289,0,0.473489471170421,0.787056926989615,0,0,0,0.467061369468678,0,0.164167464079095,0.56748166682099,0.438599962275997,1.09775057645525,0.536825675041487,0.210289948564127,0.308713837137853,3.30418782983798,1.05780226665418,0,0.696710015581316,0.902072229254653,0.605050573870028,0.667134131534611,0.380451252225118,1.89811624617805,0.164698954724011,1.50801125280162,0.397912944082302,0.19496408711912,0,1.08069024937347,1.7922714592893,0.189667900953082,0.228497025219458,0,0,0,0.140271639780637,0.316182685621286,0,0,0.370191491765402,0.592905254174298,1.33476084572875,1.17935397067922,1.57403478669398,2.43432145666204,2.17059443777175,3.05551022137704,3.74004978686054,1.78348749452539,0.823684239564244,0,2.23284568601102,0.936113019343682,0.505157755894224,0.179397413521912,0.964887042726734,2.95605104266567,0.568474235311454,0.325929952884052,0.169745085775188,0.234690248288502,0.670025029767263,0.952174563544055,0.390267295715598,1.26108115284953,0.44292937929755,1.75400245523236,3.11340297959902,4.83517949224508,2.74833211304872,10.5553898757491,11.9659250440116,1.96705709207614,0.275936746304732,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,0.488660878060728,1.31976098378028,1.32745138339963,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0.18006109403131,0,0.857348140126369,0.354680467284547,0.178368817602071,0,0,0.704015124191131,0,0,0.49465875882444,0.322928853391811,0.301564624640779,0.238744688006273,0,0.582961673259701,0.18542530201051,12.3027034174454,3.09580301944834,5.74103034846106,5.65105371014073,8.20165366326151,13.4979122191848,6.62915876976036,7.69732987780119,7.73919853304773,0,0.474503990371703,0.813277868507395,0.324016022465404,0.209088296014469,0,0.269728692769641,0.41326727862668,0,0.388844919875379,1.24267862617385,0,0.149516546043979,0,0.583353565032143,0.387479470433193,0,0.117357238645754,0.39061315453185,0,0,0,29.7050453390488,10.7444364103787,11.8117600739551,19.0983609777359,20.0509899147579,21.6562676711579,20.4332264183947,18.9042594783459,20.7990886893184,21.3379058634,23.2908487666102,21.7331074049648,25.7847735596083,25.0116570668558,0.453460767230423,0,0,0,0.772758376128762,3.56596703357246,0.73260649706906,0.643105137237198,2.00628841614145,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0.51776031175182,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.735374033800057,0,0.206035057238894,0.320919209591815,0.252697211763798,1.52087579934144,0.754505365544305,0.655490552289177,0.576226371643824,0.17230640686684,0.476293691283074,0.231768651889711,0.77163688185482,0,0.294397840268795,0,0.887379030796687,0.715308569841963,0.145346416632329,0.188218760830661,0.338458431566706,0.73171189149109,0.789209134313529,0.814824683075171,1.12228454331548,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.964533054905707,0.249810577937946,0.701794825336225,1.07435527024149,0.191288332068843,1.76473135295612,2.55054619182464 | |||
|short_description=p2@Sash3 | |||
}} |
Revision as of 19:50, 14 September 2013
Short description: | p2@Sash3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sash3_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 23bp_to_ENSMUST00000033427_5end |
EntrezGene: | Sash3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.76e-18 | 32 |
hematopoietic oligopotent progenitor cell | 1.76e-18 | 32 |
hematopoietic stem cell | 1.76e-18 | 32 |
hematopoietic multipotent progenitor cell | 1.76e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 3.36e-15 | 25 |
connective tissue cell | 1.42e-13 | 46 |
mesenchymal cell | 1.42e-13 | 46 |
leukocyte | 1.50e-12 | 17 |
nongranular leukocyte | 1.50e-12 | 17 |
lymphoid lineage restricted progenitor cell | 5.64e-11 | 12 |
T cell | 3.65e-10 | 11 |
pro-T cell | 3.65e-10 | 11 |
motile cell | 4.98e-10 | 54 |
common myeloid progenitor | 7.27e-10 | 19 |
lymphocyte | 8.03e-10 | 13 |
common lymphoid progenitor | 8.03e-10 | 13 |
mature alpha-beta T cell | 1.83e-08 | 9 |
alpha-beta T cell | 1.83e-08 | 9 |
immature T cell | 1.83e-08 | 9 |
mature T cell | 1.83e-08 | 9 |
immature alpha-beta T cell | 1.83e-08 | 9 |
myeloid cell | 6.94e-08 | 16 |
CD4-positive, alpha-beta T cell | 1.19e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.