FFCP PHASE1:Hg19::chr10:90343005..90343012,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25641 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VYX0 | |||
|association_with_transcript=-35bp_to_ENST00000331772_5end | |||
|description=CAGE_peak_4_at_RNLS_5end | |||
|id=chr10:90343005..90343012,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.77e-09;3!UBERON:0006215;9.37e-09;3!UBERON:0010227;1.23e-07;1!UBERON:0005425;1.23e-07;1!UBERON:0008801;3.50e-07;1!UBERON:0010226;3.50e-07;1!UBERON:0005062;9.08e-07;4!UBERON:0007284;9.08e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;3.50e-07;1!DOID:3603;3.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,6.20e-07,1;DOID:3603,6.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-28!115;UBERON:0002616!2.67e-15!59;UBERON:0001049!8.82e-15!57;UBERON:0005068!8.82e-15!57;UBERON:0006241!8.82e-15!57;UBERON:0007135!8.82e-15!57;UBERON:0003075!9.00e-14!86;UBERON:0007284!9.00e-14!86;UBERON:0003080!3.80e-13!42;UBERON:0002346!1.14e-12!90;UBERON:0001869!1.30e-12!32;UBERON:0002780!1.77e-12!41;UBERON:0001890!1.77e-12!41;UBERON:0006240!1.77e-12!41;UBERON:0002020!2.36e-12!34;UBERON:0003528!2.36e-12!34;UBERON:0001893!5.70e-12!34;UBERON:0000955!8.44e-12!69;UBERON:0006238!8.44e-12!69;UBERON:0002791!2.17e-11!33;UBERON:0000153!3.91e-11!129;UBERON:0007811!3.91e-11!129;UBERON:0000033!1.20e-10!123;UBERON:0003056!2.95e-10!61;UBERON:0005743!3.77e-10!86;UBERON:0001017!1.44e-09!82;UBERON:0000073!1.98e-09!94;UBERON:0001016!1.98e-09!94;UBERON:0000956!3.74e-09!25;UBERON:0000203!3.74e-09!25;UBERON:0000475!3.94e-09!365;UBERON:0002619!4.94e-09!22;UBERON:0000064!1.11e-08!219;UBERON:0004121!1.84e-08!169;UBERON:0000481!4.89e-08!347;UBERON:0000924!5.64e-08!173;UBERON:0006601!5.64e-08!173;UBERON:0001950!5.92e-08!20;UBERON:0000062!1.08e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;4.77e-09;3!UBERON:0003978;9.37e-09;3!UBERON:0000946;9.37e-09;3!UBERON:0007100;3.43e-08;25!UBERON:0002079;1.23e-07;1!UBERON:0000941;1.23e-07;1!UBERON:0001785;1.23e-07;1!UBERON:0002464;1.23e-07;1!UBERON:0004904;1.23e-07;1!UBERON:0001021;1.23e-07;1!UBERON:0002084;3.50e-07;1!UBERON:0001831;3.50e-07;1!UBERON:0002135;3.50e-07;1!UBERON:0002146;3.50e-07;1!UBERON:0001389;3.50e-07;1!UBERON:0000026;3.50e-07;1!UBERON:0008784;3.50e-07;1!UBERON:0006058;3.50e-07;1!UBERON:0003663;3.50e-07;1!UBERON:0004256;3.50e-07;1!UBERON:0002082;3.50e-07;1!UBERON:0004708;3.50e-07;1!UBERON:0002101;3.50e-07;1!UBERON:0004709;3.50e-07;1!UBERON:0005623;3.50e-07;1!UBERON:0002529;3.50e-07;1!UBERON:0010538;3.50e-07;1!UBERON:0003661;3.50e-07;1!UBERON:0010890;3.50e-07;1!UBERON:0002471;3.50e-07;1!UBERON:0001383;3.50e-07;1!UBERON:0010758;3.50e-07;1!UBERON:0010707;3.50e-07;1!UBERON:0000978;3.50e-07;1!UBERON:0002103;3.50e-07;1!UBERON:0001665;3.50e-07;1!UBERON:0003823;3.50e-07;1!UBERON:0001567;3.50e-07;1!UBERON:0000154;3.50e-07;1!UBERON:0010709;3.50e-07;1!UBERON:0001950;7.17e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.39e-15,114;UBERON:0003075,1.64e-09,82;UBERON:0007284,1.64e-09,82;UBERON:0004151,4.79e-09,3;UBERON:0002346,5.85e-09,86;UBERON:0003978,6.86e-09,3;UBERON:0009751,6.86e-09,3;UBERON:0000946,6.86e-09,3;UBERON:0002523,6.86e-09,3;UBERON:0005983,6.86e-09,3;UBERON:0002165,6.86e-09,3;UBERON:0002062,6.86e-09,3;UBERON:0007280,6.86e-09,3;UBERON:0000941,9.91e-08,1;UBERON:0001785,9.91e-08,1;UBERON:0002464,9.91e-08,1;UBERON:0004904,9.91e-08,1;UBERON:0001021,9.91e-08,1;UBERON:0003902,9.91e-08,1;UBERON:0005425,9.91e-08,1;UBERON:0002079,1.36e-07,1;UBERON:0007100,1.47e-07,27;UBERON:0005418,1.63e-07,1;UBERON:0001389,1.63e-07,1;UBERON:0000026,1.63e-07,1;UBERON:0008784,1.63e-07,1;UBERON:0006058,1.63e-07,1;UBERON:0003663,1.63e-07,1;UBERON:0004256,1.63e-07,1;UBERON:0004708,1.63e-07,1;UBERON:0002101,1.63e-07,1;UBERON:0004709,1.63e-07,1;UBERON:0002529,1.63e-07,1;UBERON:0010538,1.63e-07,1;UBERON:0003661,1.63e-07,1;UBERON:0010890,1.63e-07,1;UBERON:0002471,1.63e-07,1;UBERON:0001383,1.63e-07,1;UBERON:0004357,1.63e-07,1;UBERON:0004347,1.63e-07,1;UBERON:0005420,1.63e-07,1;UBERON:0005732,1.63e-07,1;UBERON:0010758,1.63e-07,1;UBERON:0010707,1.63e-07,1;UBERON:0000978,1.63e-07,1;UBERON:0002103,1.63e-07,1;UBERON:0001665,1.63e-07,1;UBERON:0003823,1.63e-07,1;UBERON:0000154,1.63e-07,1;UBERON:0010709,1.63e-07,1;UBERON:0005733,1.63e-07,1;UBERON:0005730,1.63e-07,1;UBERON:0002146,1.74e-07,1;UBERON:0005623,1.74e-07,1;UBERON:0002084,3.21e-07,1;UBERON:0002082,3.21e-07,1;UBERON:0010226,3.21e-07,1;UBERON:0002135,4.34e-07,1;UBERON:0010314,5.32e-07,132;UBERON:0010371,5.34e-07,104;UBERON:0001831,5.50e-07,1;UBERON:0001567,5.50e-07,1;UBERON:0008801,5.50e-07,1;UBERON:0001950,6.27e-07,20 | |||
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| |||
|short_description=p4@RNLS | |||
}} |
Revision as of 04:00, 11 January 2014
Short description: | p4@RNLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNLS_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000331772_5end |
EntrezGene: | RNLS |
HGNC: | 25641 |
UniProt: | Q5VYX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 6.20e-07 | 1 |
mucinous cystadenocarcinoma | 6.20e-07 | 1 |