FFCP PHASE1:Hg19::chr14:77228005..77228019,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19964 | |||
|TSSclassifier=strong | |||
|UniProt=Q7L8A9 | |||
|association_with_transcript=-215bp_to_NM_014909,uc001xss.2,uc001xst.2_5end | |||
|description=CAGE_peak_5_at_VASH1_5end | |||
|id=chr14:77228005..77228019,+ | |||
|ontology_enrichment_celltype=CL:0002009!9.71e-24!65;CL:0002194!1.46e-23!63;CL:0000576!1.46e-23!63;CL:0000040!1.46e-23!63;CL:0000559!1.46e-23!63;CL:0000557!2.52e-22!71;CL:0000839!1.58e-21!70;CL:0000766!1.61e-21!76;CL:0002057!6.96e-21!42;CL:0000860!1.44e-18!45;CL:0000763!2.41e-13!112;CL:0000049!2.41e-13!112;CL:0002087!3.19e-13!119;CL:0002031!1.45e-12!124;CL:0000738!2.12e-12!140;CL:0000115!1.25e-10!35;CL:0002139!1.99e-09!24;CL:0002032!7.83e-09!165;CL:0000837!7.83e-09!165;CL:0000037!1.11e-08!172;CL:0000566!1.11e-08!172;CL:0000071!1.27e-08!18;CL:0002546!1.27e-08!18;CL:0000988!5.02e-08!182;CL:0002078!1.77e-07!44;CL:1000413!4.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.21e-33;39!CL:0000234;6.21e-33;39!CL:0000860;1.76e-31;33!CL:0002057;1.76e-31;33!CL:0000576;1.47e-17;48!CL:0000766;8.53e-14;69!CL:0000235;1.26e-11;6!CL:0000115;1.95e-09;36!CL:0000071;2.12e-08;18!CL:0000840;4.25e-08;5!CL:0002544;1.25e-07;6!CL:1000413;1.29e-07;9!CL:0002139;1.29e-07;24!CL:0000738;1.80e-07;136!CL:0002262;4.59e-07;2!CL:1000398;4.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.27e-42,48;CL:0000234,3.27e-42,48;CL:0002009,1.90e-41,61;CL:0002194,2.94e-40,59;CL:0000576,2.94e-40,59;CL:0000040,2.94e-40,59;CL:0000559,2.94e-40,59;CL:0000557,5.93e-37,67;CL:0000839,4.33e-35,66;CL:0000860,4.68e-33,42;CL:0002057,4.68e-33,42;CL:0000766,1.87e-31,72;CL:0002087,1.94e-23,115;CL:0000763,1.50e-22,108;CL:0000049,1.50e-22,108;CL:0002031,3.72e-22,120;CL:0000738,1.21e-19,136;CL:0002032,3.53e-16,161;CL:0000837,3.53e-16,161;CL:0000037,4.11e-16,168;CL:0000988,8.89e-15,177;CL:0000235,2.82e-11,6;CL:0000115,3.54e-10,36;CL:0000071,1.42e-08,18;CL:0002546,1.42e-08,18;CL:0000840,4.56e-08,5;CL:0001029,4.56e-08,5;CL:1000413,8.07e-08,9;CL:0002544,8.14e-08,6;CL:0002139,1.01e-07,24;CL:0002078,1.48e-07,45;CL:0002262,5.11e-07,2;CL:1000398,5.11e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-24;42!CL:0002546;2.12e-08;18!CL:0000049;1.78e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.39e-18!80;UBERON:0001474!5.10e-16!86;UBERON:0002193!6.45e-16!112;UBERON:0002405!1.12e-15!115;UBERON:0002390!1.51e-15!102;UBERON:0003061!1.51e-15!102;UBERON:0001049!1.82e-12!57;UBERON:0005068!1.82e-12!57;UBERON:0006241!1.82e-12!57;UBERON:0007135!1.82e-12!57;UBERON:0000073!2.23e-12!94;UBERON:0001016!2.23e-12!94;UBERON:0004765!2.97e-12!101;UBERON:0001434!2.97e-12!101;UBERON:0005743!1.01e-11!86;UBERON:0001017!1.69e-11!82;UBERON:0002780!2.07e-11!41;UBERON:0001890!2.07e-11!41;UBERON:0006240!2.07e-11!41;UBERON:0003080!6.46e-11!42;UBERON:0001893!8.96e-11!34;UBERON:0002791!3.37e-10!33;UBERON:0003075!3.89e-10!86;UBERON:0007284!3.89e-10!86;UBERON:0001869!7.27e-10!32;UBERON:0003081!1.02e-09!216;UBERON:0002346!1.09e-09!90;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0002616!3.48e-09!59;UBERON:0002619!4.10e-09!22;UBERON:0000955!8.17e-09!69;UBERON:0006238!8.17e-09!69;UBERON:0001986!1.27e-08!18;UBERON:0004638!1.27e-08!18;UBERON:0004852!1.27e-08!18;UBERON:0003056!3.12e-08!61;UBERON:0001950!7.13e-08!20;UBERON:0007023!1.80e-07!115;UBERON:0000956!2.10e-07!25;UBERON:0000203!2.10e-07!25;UBERON:0003915!4.02e-07!9;UBERON:0004700!4.02e-07!9;UBERON:0001917!4.02e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.12e-08;18!UBERON:0001986;2.12e-08;18!UBERON:0004852;2.12e-08;18!UBERON:0003915;1.29e-07;9!UBERON:0004700;1.29e-07;9!UBERON:0001917;1.29e-07;9!UBERON:0002619;1.74e-07;22!UBERON:0001281;4.59e-07;2!UBERON:0003497;4.59e-07;2!UBERON:0003909;4.59e-07;2!UBERON:0003835;4.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-31,76;UBERON:0001474,1.40e-28,82;UBERON:0002405,6.20e-26,93;UBERON:0004765,2.97e-25,90;UBERON:0002390,4.68e-24,98;UBERON:0003061,4.68e-24,98;UBERON:0002193,1.54e-22,108;UBERON:0001434,7.55e-22,100;UBERON:0003081,9.43e-20,203;UBERON:0002204,1.05e-09,167;UBERON:0004638,1.42e-08,18;UBERON:0001986,1.42e-08,18;UBERON:0004852,1.42e-08,18;UBERON:0000926,1.46e-08,315;UBERON:0004120,1.46e-08,315;UBERON:0006603,1.46e-08,315;UBERON:0003915,8.07e-08,9;UBERON:0004700,8.07e-08,9;UBERON:0001917,8.07e-08,9;UBERON:0002619,1.93e-07,22;UBERON:0001281,5.11e-07,2;UBERON:0003497,5.11e-07,2;UBERON:0003909,5.11e-07,2;UBERON:0003835,5.11e-07,2;UBERON:0000923,5.26e-07,560;UBERON:0010316,5.26e-07,560;UBERON:0005291,5.26e-07,560;UBERON:0006598,5.26e-07,560;UBERON:0010317,5.26e-07,560;UBERON:0002532,5.26e-07,560;UBERON:0002050,7.54e-07,564;UBERON:0000487,9.15e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.77408061658038,0,0,0,0,0,0,2.76997704265939,3.20871115952227,1.30206522429511,0,0,0.515151135268373,2.4717700592526,7.55751887377619,3.88134497900506,1.16214518452842,4.11167888021826,3.09706370895104,0.28769239232215,1.5369642391746,0.47296445977717,0.689491361473237,2.5819387343353,2.70852973188684,1.69418105588344,5.45812300115692,1.34834090667051,1.22433556948361,5.77672248736969,1.27867425159808,0,3.19141852194611,1.70489900213078,0.580418477257168,3.97169657283798,1.86846674698672,0,5.21482918420201,0.868755378820466,0,2.20966581592539,0,0,0.212604299965044,0.419317291016752,0,0.150176892841506,0,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0.393419540227666,1.57204305099666,1.43921049299656,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,2.40696176205157,0.724122019413995,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0,0,0.351339142772504,0.261958150995425,0,0,3.24547393654683,2.08955684759121,2.92507513141503,0.238490624305342,0,0,1.59009925893364,0,3.47140501607594,0.56530794192401,2.93649605346934,0.825354125820202,0.835979866147242,0.516833518338658,0.35576626268671,2.00832367658802,0,0,1.95249646038536,2.94130464276695,1.62028389576352,1.51809538082936,0.22452937262617,0.788280363383256,0,0.949265659568129,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,4.20725321410337,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0,0.492434012174795,3.27605971194933,1.18904929830983,0,0,0,0,0,0,0.492663237895943,0,0,0.288239906833923,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0,2.43247561282381,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,1.2937654491571,0.641715181398742,0.254094624222463,0,0.773288812777695,0.670065061337395,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.431831832204279,10.7959076883203,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,1.69338866179106,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.166849141711909,0,1.67043704337145,0,0.270455678475983,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,1.9882952955326,0.562677665642051,0.111308705022906,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,1.93866549219044,0,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,0.120596438625408,0,0,0.886642856860642,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0.611030144933625,0,0.494255755786011,0.417687798021821,0.404406797884062,0,0,0,0,0,0,0,1.22429104652196,0.252746318513952,0.300646838828985,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,2.32140586367385,1.21499113316049,0,0,0.104909176269996,0,0,0,0.714695326373367,1.32418394073086,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.387848869084652,0,0,0,0,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.250381861413,0,0.443716206147409,0.18628920882415,0.415045904808692,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0.163565394255844,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.109209638192014,0,0,0.371807292777007,0.558644917973244,0,0,0,0,0,0.578063025868136,0,0.159633859057151,0,1.76450187355203,1.03735878696327,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0.206686796501184,1.14148458349032,1.09394961803644,0,0,0,0,1.07140367175657,2.0177023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| |||
|short_description=p5@VASH1 | |||
}} |
Revision as of 21:10, 11 January 2014
Short description: | p5@VASH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VASH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -215bp_to_NM_014909, uc001xss.2, uc001xst.2_5end |
EntrezGene: | VASH1 |
HGNC: | 19964 |
UniProt: | Q7L8A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-31 | 76 |
bone element | 1.40e-28 | 82 |
immune system | 6.20e-26 | 93 |
skeletal element | 2.97e-25 | 90 |
hematopoietic system | 4.68e-24 | 98 |
blood island | 4.68e-24 | 98 |
hemolymphoid system | 1.54e-22 | 108 |
skeletal system | 7.55e-22 | 100 |
lateral plate mesoderm | 9.43e-20 | 203 |
musculoskeletal system | 1.05e-09 | 167 |
blood vessel endothelium | 1.42e-08 | 18 |
endothelium | 1.42e-08 | 18 |
cardiovascular system endothelium | 1.42e-08 | 18 |
mesoderm | 1.46e-08 | 315 |
mesoderm-derived structure | 1.46e-08 | 315 |
presumptive mesoderm | 1.46e-08 | 315 |
endothelial tube | 8.07e-08 | 9 |
arterial system endothelium | 8.07e-08 | 9 |
endothelium of artery | 8.07e-08 | 9 |
regional part of cerebral cortex | 1.93e-07 | 22 |
hepatic sinusoid | 5.11e-07 | 2 |
abdomen blood vessel | 5.11e-07 | 2 |
sinusoid | 5.11e-07 | 2 |
abdominal segment blood vessel | 5.11e-07 | 2 |
germ layer | 5.26e-07 | 560 |
germ layer / neural crest | 5.26e-07 | 560 |
embryonic tissue | 5.26e-07 | 560 |
presumptive structure | 5.26e-07 | 560 |
germ layer / neural crest derived structure | 5.26e-07 | 560 |
epiblast (generic) | 5.26e-07 | 560 |
embryonic structure | 7.54e-07 | 564 |
simple squamous epithelium | 9.15e-07 | 22 |