FFCP PHASE1:Hg19::chr2:40679461..40679475,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11068 | |||
|TSSclassifier=weak | |||
|UniProt=P32418 | |||
|association_with_transcript=-252bp_to_ENST00000406785,uc002rsa.2,uc010fan.1_5end | |||
|coexpression_cluster_id=C4226 | |||
|description=CAGE_peak_4_at_SLC8A1_5end | |||
|id=chr2:40679461..40679475,- | |||
|ontology_enrichment_celltype=CL:0002057!3.58e-19!42;CL:0000860!1.62e-16!45;CL:0002194!1.13e-15!63;CL:0000576!1.13e-15!63;CL:0000040!1.13e-15!63;CL:0000559!1.13e-15!63;CL:0002009!2.06e-15!65;CL:0000766!5.59e-14!76;CL:0000557!3.06e-13!71;CL:0000839!6.93e-12!70;CL:0002620!8.86e-09!23;CL:0002393!3.14e-07!9;CL:0002397!3.14e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.78e-14;48!CL:0000860;4.94e-12;33!CL:0002057;4.94e-12;33!CL:0002620;4.96e-11;23!CL:0000473;7.86e-10;39!CL:0000234;7.86e-10;39!CL:0000766;1.94e-09;69!CL:0002393;6.74e-09;6!CL:0002397;6.74e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.77e-23,42;CL:0002057,6.77e-23,42;CL:0000473,1.57e-21,48;CL:0000234,1.57e-21,48;CL:0002009,1.32e-19,61;CL:0002194,1.61e-19,59;CL:0000576,1.61e-19,59;CL:0000040,1.61e-19,59;CL:0000559,1.61e-19,59;CL:0000557,3.34e-18,67;CL:0000766,9.80e-18,72;CL:0000839,2.88e-16,66;CL:0002393,3.34e-12,9;CL:0002397,3.34e-12,9;CL:0002620,5.42e-11,23;CL:0000763,1.97e-09,108;CL:0000049,1.97e-09,108;CL:0000057,3.55e-07,76;CL:0000134,6.87e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!1.30e-15!42;UBERON:0001869!1.50e-15!32;UBERON:0002780!3.73e-15!41;UBERON:0001890!3.73e-15!41;UBERON:0006240!3.73e-15!41;UBERON:0007023!6.04e-15!115;UBERON:0001893!1.70e-14!34;UBERON:0001049!3.15e-14!57;UBERON:0005068!3.15e-14!57;UBERON:0006241!3.15e-14!57;UBERON:0007135!3.15e-14!57;UBERON:0002020!4.49e-14!34;UBERON:0003528!4.49e-14!34;UBERON:0002791!6.59e-14!33;UBERON:0001474!2.61e-13!86;UBERON:0001017!3.33e-13!82;UBERON:0000956!4.01e-13!25;UBERON:0000203!4.01e-13!25;UBERON:0000467!4.23e-13!625;UBERON:0000468!4.40e-13!659;UBERON:0000480!6.54e-13!626;UBERON:0000955!9.27e-13!69;UBERON:0006238!9.27e-13!69;UBERON:0002619!1.10e-12!22;UBERON:0004765!2.13e-12!101;UBERON:0001434!2.13e-12!101;UBERON:0002371!4.49e-12!80;UBERON:0005743!6.14e-12!86;UBERON:0001950!1.02e-11!20;UBERON:0002204!1.10e-11!167;UBERON:0003056!1.22e-11!61;UBERON:0000062!2.21e-11!511;UBERON:0002616!2.48e-11!59;UBERON:0003075!2.70e-11!86;UBERON:0007284!2.70e-11!86;UBERON:0000073!3.19e-11!94;UBERON:0001016!3.19e-11!94;UBERON:0002390!5.77e-11!102;UBERON:0003061!5.77e-11!102;UBERON:0002346!8.60e-10!90;UBERON:0002193!3.33e-09!112;UBERON:0000479!4.30e-08!787;UBERON:0000033!5.57e-08!123;UBERON:0000153!6.59e-08!129;UBERON:0007811!6.59e-08!129;UBERON:0002050!3.64e-07!605;UBERON:0005423!3.64e-07!605;UBERON:0000923!5.41e-07!604;UBERON:0005291!5.41e-07!604;UBERON:0006598!5.41e-07!604;UBERON:0002532!5.41e-07!604;UBERON:0000922!6.91e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.99e-14;32!UBERON:0002619;5.73e-13;22!UBERON:0001893;5.93e-13;34!UBERON:0002791;7.11e-13;32!UBERON:0000956;2.81e-12;25!UBERON:0000203;2.81e-12;25!UBERON:0003528;6.55e-12;34!UBERON:0002020;6.55e-12;34!UBERON:0002780;1.84e-11;41!UBERON:0001890;1.84e-11;41!UBERON:0001950;2.10e-11;20!UBERON:0003688;5.01e-08;6!UBERON:0002358;5.01e-08;6!UBERON:0003684;5.01e-08;6!UBERON:0001178;5.01e-08;6!UBERON:0000200;1.39e-07;6!UBERON:0000955;1.53e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.85e-16,82;UBERON:0001869,4.73e-16,32;UBERON:0002371,1.53e-15,76;UBERON:0002780,2.80e-15,41;UBERON:0001890,2.80e-15,41;UBERON:0003080,2.80e-15,41;UBERON:0006240,2.80e-15,41;UBERON:0001893,1.03e-14,34;UBERON:0002791,2.14e-14,32;UBERON:0004765,6.75e-14,90;UBERON:0002619,2.73e-13,22;UBERON:0003528,3.52e-13,34;UBERON:0002020,3.52e-13,34;UBERON:0002390,3.90e-13,98;UBERON:0003061,3.90e-13,98;UBERON:0001434,6.64e-13,100;UBERON:0000956,2.14e-12,25;UBERON:0000203,2.14e-12,25;UBERON:0001950,1.34e-11,20;UBERON:0000955,1.40e-11,68;UBERON:0006238,1.40e-11,68;UBERON:0002405,2.44e-11,93;UBERON:0003056,3.24e-11,61;UBERON:0000073,6.17e-11,53;UBERON:0002616,6.17e-11,53;UBERON:0002193,8.44e-11,108;UBERON:0001049,6.01e-10,56;UBERON:0005068,6.01e-10,56;UBERON:0006241,6.01e-10,56;UBERON:0007135,6.01e-10,56;UBERON:0001017,8.19e-10,81;UBERON:0001016,1.05e-08,89;UBERON:0003688,3.65e-08,6;UBERON:0002358,3.65e-08,6;UBERON:0003684,3.65e-08,6;UBERON:0001178,3.65e-08,6;UBERON:0003075,4.81e-08,82;UBERON:0007284,4.81e-08,82;UBERON:0000200,1.82e-07,6;UBERON:0002097,1.84e-07,41;UBERON:0002346,2.74e-07,86;UBERON:0002204,5.19e-07,167;UBERON:0002199,8.92e-07,46;UBERON:0002416,8.92e-07,46 | |||
|phase1_expression=3.45188920614058,2.5692062866918,4.65149533516705,2.00146596706261,1.34088328328186,0.872338524100369,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0,0.572471974262113,0.684372125364421,1.00434111675842,0,0.246301768349837,0.0787107813136792,0.786728553697808,0.383829398097213,2.32224184974114,0,0.6024118375565,0,0,0,0.587200878669695,3.87796785972314,3.00816671205213,1.95309783644267,0.895661896959697,0.32389366601898,1.28787783817093,0.726991193897824,0.755751887377619,0.970336244751265,0.464858073811369,1.6446715520873,0.929119112685311,2.3015391385772,3.33008918487831,3.31075121844019,0.344745680736619,1.29096936716765,0,1.50593871634084,0.818718450173537,1.57306439111559,1.22433556948361,1.92557416245656,4.47535988059329,2.63881040149373,3.59034583718937,2.55734850319616,0.580418477257168,0.56738522469114,1.24564449799115,1.00499466102697,2.08593167368081,1.3031330682307,0.605399502633369,1.84138817993782,2.53169909952708,2.11255286311942,2.12604299965044,4.82214884669265,1.46027220490444,1.50176892841506,2.4108838004562,2.56511469367124,1.19350006319454,3.10529061399878,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,2.00535164254356,0.579386075843295,0,0,1.22895262313288,0.443458794925128,0.702678285545008,0.392937226493138,0.728590576585084,0,1.29818957461873,0.696518949197069,0.531831842075461,0,0,0.74291500265913,0,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0,2.48485975847659,0.12663051166458,0.132409180813219,1.43418310374407,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0.570471821544449,0.298897361103602,1.76151747965647,1.13311061057692,1.40450806702248,0.408308342509787,0.368502951935304,0,2.37600571456411,1.7308685049499,0,0,0.336672227908132,0.750711119231785,0.277064115484183,1.31693286264251,0,1.95309476578576,0.226864366320042,2.15267562826634,0.85422955527427,1.05965950579781,3.90118424909723,0.92747276314595,1.54584324027377,3.35010341396862,3.03797398034279,1.55899208257918,3.28163906517349,1.19664868234989,1.45481451136931,5.68015348026583,2.82105875037393,1.69560592310488,0,0,0.573609190778008,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.811512834825538,0.117408694235822,0.144366447761074,0,0,0,0,0.738651018262192,1.17002132569619,1.63494278517601,0,0,0,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0.07333828582095,0.129271715757778,0,0,1.86156681609409,2.08014873822732,0.514414748524284,0,0.532844358032199,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0,0,0.502257091432126,0,0.479249710983165,0,1.42636905040718,1.59259437334337,1.43833425785268,1.25342674267927,0,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,0.749007023947182,0,4.55857064779639,0,0,0,1.87173775377726,0.178428988797162,0.630809660135739,0.702848489956279,0,0,0,1.32845119707087,1.10621501125022,0.521301686808497,0,0,1.24060815673732,1.07857100409308,0.533637789017222,0,0,0,2.48107807818777,3.83654933220156,1.96462066103151,1.92208723883551,4.60536524160033,1.44768529029247,0,0.154209693802656,1.06537035187876,0.574890092096664,0.519254429183621,0.464841513839837,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,1.46511143709349,1.81520899825294,0,0,1.6068392984416,0.96670718292122,0.616194468458578,0.460511024178389,0.551346289938122,0.322260734604821,0.725083469571143,0.681813019328807,0.0890320356467374,0,0,0,0.10115778085555,0,2.20368642781448,0,0.308033580176089,0.532306030317022,1.73986598415015,0,0.429374660225974,0,0,0,0,0,0,0,0.539617372749944,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0,0.487426979262569,0,0.272999822815972,0,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,0.717056761020258,0.589494246078727,0,0.354761064070598,0.422215270595328,0,0,0,0.288666338176536,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0.764637207142375,1.13929437434833,0,0,0,0.540031437238115,0,1.49553699578462,0,0,0,0.721346064882224,0.0711418433484141,0,0,0.383010740264733,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0.425846237690326,0.343505344755765,1.22896305723383,0.671028323677248,1.16794399198336,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0.222617410045812,0,0,1.19548792950642,0.828851746593443,0.251932747854276,0,0,2.17727711363265,0,0,0,0.394573622547734,2.3948309234694,0,1.93866549219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| |||
|short_description=p4@SLC8A1 | |||
}} |
Revision as of 02:45, 21 January 2014
Short description: | p4@SLC8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC8A1_5end |
Coexpression cluster: | C4226_pineal_Neutrophils_Fibroblast_liposarcoma_parietal_clear_paracentral |
Association with transcript: | -252bp_to_ENST00000406785, uc002rsa.2, uc010fan.1_5end |
EntrezGene: | SLC8A1 |
HGNC: | 11068 |
UniProt: | P32418 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.77e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.77e-23 | 42 |
defensive cell | 1.57e-21 | 48 |
phagocyte | 1.57e-21 | 48 |
macrophage dendritic cell progenitor | 1.32e-19 | 61 |
monopoietic cell | 1.61e-19 | 59 |
monocyte | 1.61e-19 | 59 |
monoblast | 1.61e-19 | 59 |
promonocyte | 1.61e-19 | 59 |
granulocyte monocyte progenitor cell | 3.34e-18 | 67 |
myeloid leukocyte | 9.80e-18 | 72 |
myeloid lineage restricted progenitor cell | 2.88e-16 | 66 |
intermediate monocyte | 3.34e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.34e-12 | 9 |
skin fibroblast | 5.42e-11 | 23 |
myeloid cell | 1.97e-09 | 108 |
common myeloid progenitor | 1.97e-09 | 108 |
fibroblast | 3.55e-07 | 76 |
mesenchymal cell | 6.87e-07 | 354 |