FFCP PHASE1:Hg19::chr20:4982098..4982109,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9962 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10973 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UGH3 | |||
|association_with_transcript=35bp_to_ENST00000338244,NM_005116,uc002wlg.1,uc002wlj.1,uc010zqr.1_5end | |||
|description=CAGE_peak_2_at_SLC23A2_5end | |||
|id=chr20:4982098..4982109,- | |||
|ontology_enrichment_celltype=CL:0000738!1.64e-24!140;CL:0000766!1.01e-19!76;CL:0002087!7.04e-19!119;CL:0002031!9.08e-18!124;CL:0000037!8.99e-17!172;CL:0000566!8.99e-17!172;CL:0002032!1.50e-15!165;CL:0000837!1.50e-15!165;CL:0000557!2.68e-15!71;CL:0000988!4.68e-15!182;CL:0000839!1.07e-14!70;CL:0002057!1.08e-14!42;CL:0002194!2.21e-14!63;CL:0000576!2.21e-14!63;CL:0000040!2.21e-14!63;CL:0000559!2.21e-14!63;CL:0002009!2.32e-13!65;CL:0000860!3.62e-13!45;CL:0000763!1.02e-10!112;CL:0000049!1.02e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-19;33!CL:0002057;2.04e-19;33!CL:0000473;2.58e-19;39!CL:0000234;2.58e-19;39!CL:0000576;3.01e-12;48!CL:0000766;3.21e-12;69!CL:0000738;6.22e-07;136!CL:0002087;8.18e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.73e-28,136;CL:0000766,2.89e-27,72;CL:0000473,5.36e-23,48;CL:0000234,5.36e-23,48;CL:0002031,2.92e-22,120;CL:0000557,1.21e-21,67;CL:0002087,1.22e-21,115;CL:0000839,2.90e-21,66;CL:0000037,4.50e-20,168;CL:0002194,8.53e-20,59;CL:0000576,8.53e-20,59;CL:0000040,8.53e-20,59;CL:0000559,8.53e-20,59;CL:0000860,6.55e-19,42;CL:0002057,6.55e-19,42;CL:0002032,8.33e-19,161;CL:0000837,8.33e-19,161;CL:0002009,1.22e-18,61;CL:0000988,1.27e-17,177;CL:0000763,4.27e-15,108;CL:0000049,4.27e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.53e-17!115;UBERON:0001049!1.82e-15!57;UBERON:0005068!1.82e-15!57;UBERON:0006241!1.82e-15!57;UBERON:0007135!1.82e-15!57;UBERON:0000955!1.10e-13!69;UBERON:0006238!1.10e-13!69;UBERON:0002780!1.19e-13!41;UBERON:0001890!1.19e-13!41;UBERON:0006240!1.19e-13!41;UBERON:0003080!1.20e-13!42;UBERON:0001017!1.23e-13!82;UBERON:0005743!4.95e-13!86;UBERON:0002616!9.56e-13!59;UBERON:0001893!2.15e-12!34;UBERON:0002020!3.62e-12!34;UBERON:0003528!3.62e-12!34;UBERON:0002390!4.11e-12!102;UBERON:0003061!4.11e-12!102;UBERON:0002791!8.10e-12!33;UBERON:0000073!1.41e-11!94;UBERON:0001016!1.41e-11!94;UBERON:0001869!1.97e-11!32;UBERON:0002405!5.26e-11!115;UBERON:0002371!8.66e-11!80;UBERON:0002193!3.36e-10!112;UBERON:0001474!3.05e-09!86;UBERON:0002619!3.83e-09!22;UBERON:0001950!1.10e-08!20;UBERON:0000956!1.93e-08!25;UBERON:0000203!1.93e-08!25;UBERON:0003075!3.54e-07!86;UBERON:0007284!3.54e-07!86;UBERON:0004765!4.97e-07!101;UBERON:0001434!4.97e-07!101;UBERON:0002346!7.74e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.10e-13;41!UBERON:0001890;6.10e-13;41!UBERON:0001950;1.14e-12;20!UBERON:0001893;1.19e-12;34!UBERON:0000073;1.23e-12;53!UBERON:0002616;1.23e-12;53!UBERON:0002619;1.86e-12;22!UBERON:0002791;4.03e-12;32!UBERON:0001869;5.10e-12;32!UBERON:0003528;5.30e-12;34!UBERON:0002020;5.30e-12;34!UBERON:0000956;3.14e-10;25!UBERON:0000203;3.14e-10;25!UBERON:0000955;1.16e-08;68!UBERON:0001017;4.73e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.49e-22,56;UBERON:0005068,5.49e-22,56;UBERON:0006241,5.49e-22,56;UBERON:0007135,5.49e-22,56;UBERON:0000073,2.95e-21,53;UBERON:0002616,2.95e-21,53;UBERON:0002780,3.25e-18,41;UBERON:0001890,3.25e-18,41;UBERON:0003080,3.25e-18,41;UBERON:0006240,3.25e-18,41;UBERON:0002371,4.70e-17,76;UBERON:0000955,7.09e-17,68;UBERON:0006238,7.09e-17,68;UBERON:0002390,9.28e-17,98;UBERON:0003061,9.28e-17,98;UBERON:0001017,9.74e-17,81;UBERON:0001893,1.28e-15,34;UBERON:0002405,2.18e-15,93;UBERON:0003528,2.68e-15,34;UBERON:0002020,2.68e-15,34;UBERON:0001016,5.59e-15,89;UBERON:0001474,1.30e-14,82;UBERON:0001869,3.51e-14,32;UBERON:0002193,3.88e-14,108;UBERON:0002791,5.24e-14,32;UBERON:0007023,7.34e-14,114;UBERON:0001950,4.82e-13,20;UBERON:0002619,8.04e-13,22;UBERON:0003075,4.04e-12,82;UBERON:0007284,4.04e-12,82;UBERON:0002346,4.10e-12,86;UBERON:0004765,6.25e-12,90;UBERON:0000956,1.54e-10,25;UBERON:0000203,1.54e-10,25;UBERON:0003056,1.80e-10,61;UBERON:0001434,6.19e-10,100;UBERON:0010371,4.06e-08,104 | |||
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| |||
|short_description=p2@SLC23A2 | |||
}} |
Revision as of 10:04, 21 January 2014
Short description: | p2@SLC23A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC23A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000338244, NM_005116, uc002wlg.1, uc002wlj.1, uc010zqr.1_5end |
EntrezGene: | SLC23A2 |
HGNC: | 10973 |
UniProt: | Q9UGH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.73e-28 | 136 |
myeloid leukocyte | 2.89e-27 | 72 |
defensive cell | 5.36e-23 | 48 |
phagocyte | 5.36e-23 | 48 |
hematopoietic lineage restricted progenitor cell | 2.92e-22 | 120 |
granulocyte monocyte progenitor cell | 1.21e-21 | 67 |
nongranular leukocyte | 1.22e-21 | 115 |
myeloid lineage restricted progenitor cell | 2.90e-21 | 66 |
hematopoietic stem cell | 4.50e-20 | 168 |
monopoietic cell | 8.53e-20 | 59 |
monocyte | 8.53e-20 | 59 |
monoblast | 8.53e-20 | 59 |
promonocyte | 8.53e-20 | 59 |
classical monocyte | 6.55e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.55e-19 | 42 |
hematopoietic oligopotent progenitor cell | 8.33e-19 | 161 |
hematopoietic multipotent progenitor cell | 8.33e-19 | 161 |
macrophage dendritic cell progenitor | 1.22e-18 | 61 |
hematopoietic cell | 1.27e-17 | 177 |
myeloid cell | 4.27e-15 | 108 |
common myeloid progenitor | 4.27e-15 | 108 |