FFCP PHASE1:Hg19::chr3:121379739..121379771,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3059 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4844 | |||
|TSSclassifier=strong | |||
|UniProt=P14317,E7EVW7,F8WEZ6 | |||
|association_with_transcript=0bp_to_ENST00000314583,ENST00000428394,ENST00000479994,ENST00000481314,ENST00000487290,ENST00000488033,ENST00000491824,ENST00000497391_5end | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_1_at_HCLS1_5end | |||
|id=chr3:121379739..121379771,- | |||
|ontology_enrichment_celltype=CL:0000037!3.24e-71!172;CL:0000566!3.24e-71!172;CL:0002032!1.89e-67!165;CL:0000837!1.89e-67!165;CL:0000988!1.19e-66!182;CL:0000738!8.74e-64!140;CL:0002087!1.92e-52!119;CL:0002031!8.82e-52!124;CL:0000763!1.40e-41!112;CL:0000049!1.40e-41!112;CL:0000766!8.86e-34!76;CL:0000557!5.38e-29!71;CL:0000839!3.86e-28!70;CL:0002009!1.41e-27!65;CL:0002194!3.40e-27!63;CL:0000576!3.40e-27!63;CL:0000040!3.40e-27!63;CL:0000559!3.40e-27!63;CL:0002057!3.94e-25!42;CL:0000542!5.77e-22!53;CL:0000051!5.77e-22!53;CL:0000838!1.46e-21!52;CL:0000860!3.87e-21!45;CL:0000134!1.95e-16!358;CL:0002320!3.66e-15!365;CL:0000048!4.31e-13!430;CL:0000723!1.52e-11!436;CL:0000034!4.38e-11!444;CL:0000945!6.22e-11!24;CL:0000826!6.22e-11!24;CL:0000084!1.23e-10!25;CL:0000827!1.23e-10!25;CL:0000791!5.35e-09!18;CL:0000789!5.35e-09!18;CL:0002420!5.35e-09!18;CL:0002419!5.35e-09!18;CL:0000790!5.35e-09!18;CL:0000219!3.26e-08!390;CL:0000236!4.62e-07!14;CL:0002393!9.58e-07!9;CL:0002397!9.58e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.51e-18;33!CL:0002057;2.51e-18;33!CL:0000576;3.26e-18;48!CL:0000473;6.89e-18;39!CL:0000234;6.89e-18;39!CL:0000766;2.80e-16;69!CL:0002087;7.57e-16;104!CL:0000738;1.14e-14;136!CL:0000763;2.20e-13;100!CL:0000542;5.54e-13;53!CL:0000988;2.10e-12;177!CL:0000945;4.25e-11;24!CL:0000084;8.36e-11;25!CL:0000791;3.89e-09;18!CL:0000789;3.89e-09;18!CL:0002419;3.89e-09;18!CL:0000094;8.27e-07;8!CL:0000236;8.38e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.82e-76,168;CL:0002032,3.46e-72,161;CL:0000837,3.46e-72,161;CL:0000988,2.23e-70,177;CL:0000738,4.38e-69,136;CL:0002087,1.81e-57,115;CL:0002031,1.23e-56,120;CL:0000763,1.14e-45,108;CL:0000049,1.14e-45,108;CL:0000766,1.49e-38,72;CL:0000557,1.93e-33,67;CL:0000839,1.59e-32,66;CL:0002009,4.04e-32,61;CL:0002194,8.74e-32,59;CL:0000576,8.74e-32,59;CL:0000040,8.74e-32,59;CL:0000559,8.74e-32,59;CL:0000473,1.70e-28,48;CL:0000234,1.70e-28,48;CL:0000860,1.47e-25,42;CL:0002057,1.47e-25,42;CL:0000542,2.46e-22,53;CL:0000051,2.46e-22,53;CL:0000838,6.32e-22,52;CL:0000134,1.62e-16,354;CL:0002320,9.50e-15,361;CL:0000048,1.47e-12,427;CL:0000723,3.30e-11,433;CL:0000945,4.21e-11,24;CL:0000826,4.21e-11,24;CL:0000084,8.41e-11,25;CL:0000827,8.41e-11,25;CL:0000034,1.45e-10,441;CL:0000791,3.92e-09,18;CL:0000789,3.92e-09,18;CL:0002420,3.92e-09,18;CL:0002419,3.92e-09,18;CL:0000790,3.92e-09,18;CL:0000219,1.83e-08,386;CL:0000236,3.67e-07,14;CL:0002393,7.70e-07,9;CL:0002397,7.70e-07,9;CL:0000094,8.31e-07,8;CL:0000115,9.20e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-18;42!CL:0000051;5.54e-13;53!CL:0000049;7.73e-13;108!CL:0000790;3.89e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!3.12e-12!51;DOID:0060083!3.12e-12!51;DOID:1240!1.17e-09!39;DOID:8692!1.81e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.15e-08;51!DOID:0060083;8.15e-08;51!DOID:1240;1.49e-07;39!DOID:8692;4.28e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.61e-12,51;DOID:0060083,2.61e-12,51;DOID:1240,1.30e-09,39;DOID:8692,2.16e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.01e-37!112;UBERON:0002390!9.32e-37!102;UBERON:0003061!9.32e-37!102;UBERON:0002371!3.79e-26!80;UBERON:0002405!3.65e-23!115;UBERON:0003081!1.22e-21!216;UBERON:0001474!2.66e-21!86;UBERON:0004765!5.31e-16!101;UBERON:0001434!5.31e-16!101;UBERON:0002384!2.58e-13!375;UBERON:0007023!4.23e-12!115;UBERON:0002204!3.50e-09!167;UBERON:0000178!1.06e-08!15;UBERON:0000179!1.06e-08!15;UBERON:0000463!1.06e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.83e-09;15!UBERON:0000179;7.83e-09;15!UBERON:0000463;7.83e-09;15!UBERON:0002390;4.56e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.25e-41,108;UBERON:0002390,4.39e-41,98;UBERON:0003061,4.39e-41,98;UBERON:0002405,1.90e-33,93;UBERON:0002371,4.69e-30,76;UBERON:0003081,8.36e-27,203;UBERON:0001474,1.17e-24,82;UBERON:0004765,1.58e-19,90;UBERON:0001434,1.29e-16,100;UBERON:0002384,5.70e-13,371;UBERON:0007023,4.48e-12,114;UBERON:0002204,5.49e-09,167;UBERON:0000178,7.85e-09,15;UBERON:0000179,7.85e-09,15;UBERON:0000463,7.85e-09,15;UBERON:0000926,1.89e-07,315;UBERON:0004120,1.89e-07,315;UBERON:0006603,1.89e-07,315 | |||
|phase1_expression=3.81524596468169,2.5692062866918,1.55049844505568,10.007329835313,2.68176656656373,0,2.53299878168311,4.42203911398782,8.09675447419499,0,0,5.89791704751465,4.48403862988371,0.495065411840187,0.994192127183747,16.8081286612944,9.04041792035965,8.76372108464848,5.85519358548608,0,0,0,0,0,0,225.878027390944,232.180466964447,236.919451754175,543.629430605185,391.505986059157,323.875329977231,13.7913183671839,24.09647350226,32.5383528946773,183.984601378216,130.65352465594,113.036169143916,363.974983405443,414.124284025843,334.847773514559,596.286907900919,415.231679836332,599.893497020021,357.24347268139,369.184796983967,298.86356338339,403.496808068268,375.396281763927,349.039079998782,431.250896090904,356.575703488508,254.691361590006,403.007700781107,336.297520147173,268.144443456797,384.955584364627,383.978953131389,275.735715414119,488.815976116331,433.254186552726,395.110343743808,401.099181027047,315.3520426998,277.898537347317,546.173787098995,499.298997728203,399.229061606164,393.204161126803,377.032150017806,300.806549916587,399.563671738023,483.180258415685,340.829991273833,364.4153688881,420.956513930786,379.901465661177,302.725660939804,400.972303886822,465.13984790135,384.197178563203,464.669357937074,432.366051960889,246.394742245852,269.246335352231,274.858359443838,263.719277546101,330.32668930471,250.0173113802,276.316756824072,281.445857587932,269.806947357879,246.639619535794,232.804395928264,76.659370575835,123.311883855938,99.032415875429,249.231278734226,253.098931210462,245.076986807415,268.167138606648,188.383070114215,183.697748625077,190.930193839753,344.369722232072,219.776006976229,220.647759005287,334.442771749794,283.466090552919,290.162404406088,262.442895747467,261.703466843198,299.946193735779,201.52143933724,175.774324054942,173.528969516261,302.309326317107,194.676010749776,261.156858566799,297.298138122916,291.805919520873,278.663718250547,249.968887689922,369.963067574088,386.13560585288,321.071967239529,336.223697902504,289.858182913129,279.225339366254,243.638018358775,234.615534290134,0,2.68280343881454,3.96373941714944,2.89151321907653,2.50668955317945,3.62116297402059,4.7717156823066,2.91980922181582,0,0,2.45937399940753,23.4452545140906,2.18577172975525,0.370784442784429,235.6214077933,251.269210922843,250.492797617542,220.842318106747,224.22200502581,195.758103200681,87.6542216487169,111.830497363796,114.903506032114,92.1451945336136,80.124392316092,97.3917868467839,90.0768305773654,90.7042824684344,81.8262404179434,85.3537562549909,82.177180690266,116.321632174932,54.4258388332418,68.7529960246774,93.9764659542841,73.940175019218,86.6683378337015,95.1567010084073,64.392987735671,73.0934557867459,88.1200388305259,1814.61634809459,1958.29033394904,13.082821564276,8.44852317882041,1.2663051166458,5.82600395578163,7.45775213946916,10.9947198481491,0.560677600142307,8.5399196583764,0.98667019366864,0.622422070799533,10.372721749366,4.7403951902903,2.72443369760877,1.15235184896,0.937285727335186,0.312160076830321,23.3893446833224,4.18456305545043,3.17073146338165,0.323745888736263,0.140450806702248,7.14539599392126,1.59684612505298,7.74943358818241,9.50402285825643,3.21447008062124,2.73048408581408,0.718618141816238,2.86171393721913,2.12701483782339,2.21651292387346,2.19488810440419,10.4205850571667,3.90618953157152,2.49550802952046,4.84352016359927,2.34913127700424,5.72216133130817,10.8032794590385,9.37778016069794,15.973713482829,8.93360910391631,1.18143432568886,1.36411807225678,10.8546522924969,5.98324341174946,0.323292113637624,3.19508633264953,1.81353776809752,5.59549954624609,13.3349988682675,9.27336810008838,2.58124135850103,0.243947412259191,0.132529768321485,0.348581828608555,0.829288440122964,0,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0.236613600079688,0,0,0,0,0,0.539325232640658,0,0,53.1471927329747,28.0483547606892,2.4694440679884,8.82052268313252,10.1404027857465,25.5535076336183,63.8053099215916,139.060876315615,0.368965315629341,2.74508496477641,0,0,0,2.31471112896324,0.325808305310325,2.07986957055916,0,0,1.99594780200897,83.7325397014228,70.3737979116448,61.071582867306,0,0,326.976184084064,277.529058455136,341.703042101786,19.6841051372232,0,0.850650583454319,0.0895585227028483,0,0.766765358330422,213.815845246839,132.777038491945,87.4924647582058,99.4427678577034,81.4263695600151,0.063497894292169,0,0,5.13217338068116,0.411309970813294,0,0,1.90622843387113,0.87192013766656,1.83345714552375,0.517086863031111,7.15312891703765,14.370146793452,0,0,2.57207374262142,4.25547396069835,4.79559922228979,7.29187767656553,9.22456729165453,10.70212437815,11.7265026345745,5.68627117988073,14.2551337128017,0,0,0.099972991182057,270.004793023443,254.644345356088,295.167515276244,0.958499421966331,0,1.42636905040718,0.434343920002738,2.67119219315498,0,183.931721293378,291.999586619256,226.624581177353,246.932001802236,0.254094624222463,0,0,4.52293916402742,0,1545.95049742698,1343.23495182607,1353.48106688209,0.61345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| |||
|short_description=p1@HCLS1 | |||
}} |
Revision as of 20:53, 21 January 2014
Short description: | p1@HCLS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HCLS1_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_ENST00000314583, ENST00000428394, ENST00000479994, ENST00000481314, ENST00000487290, ENST00000488033, ENST00000491824, ENST00000497391_5end |
EntrezGene: | HCLS1 |
HGNC: | 4844 |
UniProt: | P14317E7EVW7F8WEZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.25e-41 | 108 |
hematopoietic system | 4.39e-41 | 98 |
blood island | 4.39e-41 | 98 |
immune system | 1.90e-33 | 93 |
bone marrow | 4.69e-30 | 76 |
lateral plate mesoderm | 8.36e-27 | 203 |
bone element | 1.17e-24 | 82 |
skeletal element | 1.58e-19 | 90 |
skeletal system | 1.29e-16 | 100 |
connective tissue | 5.70e-13 | 371 |
adult organism | 4.48e-12 | 114 |
musculoskeletal system | 5.49e-09 | 167 |
blood | 7.85e-09 | 15 |
haemolymphatic fluid | 7.85e-09 | 15 |
organism substance | 7.85e-09 | 15 |
mesoderm | 1.89e-07 | 315 |
mesoderm-derived structure | 1.89e-07 | 315 |
presumptive mesoderm | 1.89e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.61e-12 | 51 |
immune system cancer | 2.61e-12 | 51 |
leukemia | 1.30e-09 | 39 |
myeloid leukemia | 2.16e-07 | 31 |