FFCP PHASE1:Hg19::chr4:38869410..38869435,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92689 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25087 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWE2 | |||
|association_with_transcript=-1bp_to_ENST00000358869,uc003gtn.2,uc011byg.1,uc011byh.1_5end | |||
|coexpression_cluster_id=C938 | |||
|description=CAGE_peak_1_at_FAM114A1_5end | |||
|id=chr4:38869410..38869435,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.42e-39!180;CL:0000057!7.64e-25!75;CL:0000680!7.58e-19!57;CL:0000056!7.58e-19!57;CL:0000355!7.58e-19!57;CL:0000183!1.44e-18!59;CL:0000222!2.00e-18!119;CL:0000187!3.18e-18!54;CL:0000192!2.56e-16!42;CL:0000514!2.56e-16!42;CL:0000393!1.84e-14!60;CL:0000211!1.84e-14!60;CL:0000359!1.88e-13!32;CL:0000220!1.02e-11!246;CL:0002620!1.41e-11!23;CL:0002321!2.99e-11!248;CL:0002371!1.03e-09!591;CL:0000144!5.86e-08!625;CL:0000499!4.61e-07!27;CL:0000548!6.64e-07!679;CL:0000004!6.64e-07!679;CL:0000255!6.64e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.71e-13;32!CL:0000192;6.39e-12;43!CL:0002620;1.27e-11;23!CL:0000134;2.41e-11;55!CL:0000187;1.40e-10;55!CL:0000057;2.79e-10;73!CL:0000048;1.35e-09;58!CL:0000723;1.59e-09;61!CL:0002320;5.04e-09;188!CL:0000393;6.93e-08;61!CL:0000211;6.93e-08;61!CL:0000499;1.28e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-25,76;CL:0000680,4.12e-19,58;CL:0000056,4.12e-19,58;CL:0000355,4.12e-19,58;CL:0000222,7.00e-19,121;CL:0000187,1.75e-18,55;CL:0000192,1.46e-16,43;CL:0000514,1.46e-16,43;CL:0000393,1.02e-14,61;CL:0000211,1.02e-14,61;CL:0000359,1.77e-13,32;CL:0002620,1.34e-11,23;CL:0002321,1.44e-11,250;CL:0000499,1.28e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;6.39e-12;43!CL:0000355;4.24e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!7.91e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.88e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.65e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.77e-24!143;UBERON:0000914!3.52e-24!83;UBERON:0002329!3.52e-24!83;UBERON:0003077!3.52e-24!83;UBERON:0003059!3.52e-24!83;UBERON:0007282!3.52e-24!83;UBERON:0009618!3.52e-24!83;UBERON:0007285!3.52e-24!83;UBERON:0004290!2.39e-20!70;UBERON:0002100!5.14e-20!216;UBERON:0000486!7.41e-20!82;UBERON:0000475!3.10e-19!365;UBERON:0003914!1.96e-18!118;UBERON:0000468!2.33e-18!659;UBERON:0001134!5.35e-18!61;UBERON:0002036!5.35e-18!61;UBERON:0003082!5.35e-18!61;UBERON:0002385!5.85e-18!63;UBERON:0001015!5.85e-18!63;UBERON:0000383!5.85e-18!63;UBERON:0002049!2.09e-17!79;UBERON:0007798!2.09e-17!79;UBERON:0003104!7.32e-17!238;UBERON:0009142!7.32e-17!238;UBERON:0000490!1.03e-16!138;UBERON:0004872!1.53e-16!84;UBERON:0000467!1.21e-15!625;UBERON:0000480!1.54e-15!626;UBERON:0000481!2.43e-15!347;UBERON:0000055!1.56e-14!69;UBERON:0001981!2.88e-14!60;UBERON:0007500!2.88e-14!60;UBERON:0004537!2.88e-14!60;UBERON:0006965!2.88e-14!60;UBERON:0000926!9.54e-14!448;UBERON:0004120!9.54e-14!448;UBERON:0006603!9.54e-14!448;UBERON:0001637!2.03e-13!42;UBERON:0003509!2.03e-13!42;UBERON:0004572!2.03e-13!42;UBERON:0003102!7.60e-13!95;UBERON:0004535!3.32e-12!110;UBERON:0004573!4.09e-12!33;UBERON:0004571!4.09e-12!33;UBERON:0000119!4.56e-12!312;UBERON:0000477!8.94e-12!286;UBERON:0001009!9.61e-12!113;UBERON:0000483!2.19e-11!309;UBERON:0004111!6.32e-10!241;UBERON:0002050!3.30e-09!605;UBERON:0005423!3.30e-09!605;UBERON:0000923!4.99e-09!604;UBERON:0005291!4.99e-09!604;UBERON:0006598!4.99e-09!604;UBERON:0002532!4.99e-09!604;UBERON:0002199!6.51e-09!45;UBERON:0002416!6.51e-09!45;UBERON:0000922!1.12e-08!612;UBERON:0002097!5.27e-08!40;UBERON:0000947!1.07e-07!21;UBERON:0010191!1.07e-07!21;UBERON:0001135!7.24e-07!15;UBERON:0000025!9.55e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.47e-11;33!UBERON:0004571;4.47e-11;33!UBERON:0001637;1.41e-09;42!UBERON:0003509;1.41e-09;42!UBERON:0004572;1.41e-09;42!UBERON:0002384;8.36e-09;198!UBERON:0007500;6.51e-08;56!UBERON:0001981;6.51e-08;56!UBERON:0004537;6.51e-08;56!UBERON:0000947;9.87e-08;21!UBERON:0010191;9.87e-08;21!UBERON:0002385;1.30e-07;31!UBERON:0001015;1.30e-07;31!UBERON:0000383;1.30e-07;31!UBERON:0002049;3.78e-07;75!UBERON:0007798;3.78e-07;75!UBERON:0001135;7.16e-07;15!UBERON:0000055;8.39e-07;65!UBERON:0002204;9.23e-07;70 | |||
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| |||
|short_description=p1@FAM114A1 | |||
}} |
Revision as of 00:42, 22 January 2014
Short description: | p1@FAM114A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM114A1_5end |
Coexpression cluster: | C938_leiomyoma_Smooth_Preadipocyte_hepatic_basal_Adipocyte_Ewing |
Association with transcript: | -1bp_to_ENST00000358869, uc003gtn.2, uc011byg.1, uc011byh.1_5end |
EntrezGene: | FAM114A1 |
HGNC: | 25087 |
UniProt: | Q8IWE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-25 | 76 |
muscle precursor cell | 4.12e-19 | 58 |
myoblast | 4.12e-19 | 58 |
multi-potent skeletal muscle stem cell | 4.12e-19 | 58 |
mesodermal cell | 7.00e-19 | 121 |
muscle cell | 1.75e-18 | 55 |
smooth muscle cell | 1.46e-16 | 43 |
smooth muscle myoblast | 1.46e-16 | 43 |
electrically responsive cell | 1.02e-14 | 61 |
electrically active cell | 1.02e-14 | 61 |
vascular associated smooth muscle cell | 1.77e-13 | 32 |
skin fibroblast | 1.34e-11 | 23 |
embryonic cell | 1.44e-11 | 250 |
stromal cell | 1.28e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.65e-08 | 14 |