FFCP PHASE1:Hg19::chr5:147248693..147248701,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr5:147248693..147248701,- | |||
|id=chr5:147248693..147248701,- | |||
|ontology_enrichment_celltype=CL:0002322!1.28e-19!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.79e-61;5!CL:0002321;2.11e-20;15!CL:0000540;9.12e-20;6!CL:0000404;9.12e-20;6!CL:0000148;1.20e-11;10!CL:0000147;1.77e-08;14!CL:0000054;2.05e-07;2!CL:0000137;2.05e-07;2!CL:0000092;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.63e-61,5;CL:0000540,9.12e-20,6;CL:0000031,9.12e-20,6;CL:0000404,9.12e-20,6;CL:0000047,5.50e-15,8;CL:0000148,1.05e-11,10;CL:0000541,1.05e-11,10;CL:0000147,1.61e-08,14;CL:0000054,2.25e-07,2;CL:0000137,2.25e-07,2;CL:0000092,2.25e-07,2;CL:0000133,4.55e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;9.12e-20;6!UBERON:0005425;1.51e-13;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.09e-08!143;DOID:3350!1.34e-08!2;DOID:114!4.19e-08!2;DOID:305!8.59e-08!106;DOID:3095!1.88e-07!22;DOID:2994!1.88e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3571;6.65e-14;1!DOID:3350;1.36e-07;2!DOID:200;2.05e-07;2!DOID:4305;2.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,6.65e-14,1;DOID:3350,1.36e-07,2;DOID:200,2.25e-07,2;DOID:4305,2.25e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.05e-24!9;UBERON:0001557!9.79e-11!19;UBERON:0003135!2.89e-08!11;UBERON:0000473!1.27e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.51e-13;1!UBERON:0001785;1.51e-13;1!UBERON:0002464;1.51e-13;1!UBERON:0004904;1.51e-13;1!UBERON:0001021;1.51e-13;1!UBERON:0003714;2.05e-07;2!UBERON:0005162;2.05e-07;2!UBERON:0000122;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.61e-13,1;UBERON:0001785,1.61e-13,1;UBERON:0002464,1.61e-13,1;UBERON:0004904,1.61e-13,1;UBERON:0001021,1.61e-13,1;UBERON:0003902,1.61e-13,1;UBERON:0005425,1.61e-13,1;UBERON:0003714,2.12e-07,2;UBERON:0005162,2.12e-07,2;UBERON:0000122,2.12e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6834215348511,1.06023814657188,2.20768491452085,1.86589899027667,1.7662459561294,6.56959246336494,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,5.40449825313605,0,0,0,0,0,0,0,0,9.64518890790115,14.5791802793068,10.8014487887588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,1.1441462864015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65882632021729,13.1118686356435,0.126698501011437,7.34319574142268,0.801652215796681,0.827054095813604,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:147248693..147248701,- | |||
}} |
Revision as of 08:10, 22 January 2014
Short description: | p@chr5:147248693..147248701, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:147248693..147248701, - |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.63e-61 | 5 |
neuron | 9.12e-20 | 6 |
neuroblast | 9.12e-20 | 6 |
electrically signaling cell | 9.12e-20 | 6 |
neuronal stem cell | 5.50e-15 | 8 |
melanocyte | 1.05e-11 | 10 |
melanoblast | 1.05e-11 | 10 |
pigment cell | 1.61e-08 | 14 |
bone matrix secreting cell | 2.25e-07 | 2 |
osteocyte | 2.25e-07 | 2 |
osteoclast | 2.25e-07 | 2 |
neurectodermal cell | 4.55e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.61e-13 | 1 |
cranial nerve | 1.61e-13 | 1 |
nerve trunk | 1.61e-13 | 1 |
nerve connecting eye with brain | 1.61e-13 | 1 |
nerve | 1.61e-13 | 1 |
retinal neural layer | 1.61e-13 | 1 |
presumptive neural retina | 1.61e-13 | 1 |
neural tissue | 2.12e-07 | 2 |
multi cell component structure | 2.12e-07 | 2 |
neuron projection bundle | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 6.65e-14 | 1 |
mesenchymal cell neoplasm | 1.36e-07 | 2 |
giant cell tumor | 2.25e-07 | 2 |
bone giant cell tumor | 2.25e-07 | 2 |