FFCP PHASE1:Hg19::chr11:102662218..102662229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102662218..102662229,- | |||
|coexpression_cluster_id=C422 | |coexpression_cluster_id=C422 | ||
|description=CAGE_peak_at_chr11:102662218..102662229,- | |description=CAGE_peak_at_chr11:102662218..102662229,- | ||
|id=chr11:102662218..102662229,- | |id=chr11:102662218..102662229,- | ||
|ontology_enrichment_celltype=CL:0000359!9.69e-24!32;CL:0000192!1.04e-20!42;CL:0000514!1.04e-20!42;CL:0000222!1.64e-16!119;CL:0000055!6.54e-15!180;CL:0000187!9.37e-15!54;CL:0000680!1.15e-13!57;CL:0000056!1.15e-13!57;CL:0000355!1.15e-13!57;CL:0000183!5.25e-13!59;CL:0000393!1.08e-12!60;CL:0000211!1.08e-12!60;CL:1000413!2.33e-12!9;CL:0002139!1.22e-11!24;CL:0000220!4.19e-10!246;CL:0002544!4.92e-10!6;CL:0002321!6.29e-10!248;CL:0000071!3.66e-09!18;CL:0002546!3.66e-09!18;CL:0002595!6.33e-09!5;CL:0002592!1.21e-08!3;CL:0002539!1.78e-08!10;CL:0000115!4.13e-07!35;CL:0002494!6.69e-07!16 | |ontology_enrichment_celltype=CL:0000359!9.69e-24!32;CL:0000192!1.04e-20!42;CL:0000514!1.04e-20!42;CL:0000222!1.64e-16!119;CL:0000055!6.54e-15!180;CL:0000187!9.37e-15!54;CL:0000680!1.15e-13!57;CL:0000056!1.15e-13!57;CL:0000355!1.15e-13!57;CL:0000183!5.25e-13!59;CL:0000393!1.08e-12!60;CL:0000211!1.08e-12!60;CL:1000413!2.33e-12!9;CL:0002139!1.22e-11!24;CL:0000220!4.19e-10!246;CL:0002544!4.92e-10!6;CL:0002321!6.29e-10!248;CL:0000071!3.66e-09!18;CL:0002546!3.66e-09!18;CL:0002595!6.33e-09!5;CL:0002592!1.21e-08!3;CL:0002539!1.78e-08!10;CL:0000115!4.13e-07!35;CL:0002494!6.69e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.77e-42;32!CL:0002595;1.25e-28;5!CL:0000192;3.40e-28;43!CL:0002592;1.02e-26;3!CL:0002593;2.22e-18;2!CL:0000187;4.90e-14;55!CL:0002539;5.11e-14;10!CL:0002494;1.53e-13;16!CL:0000393;8.68e-13;61!CL:0000211;8.68e-13;61!CL:0000511;6.91e-10;1!CL:0002625;6.91e-10;1!CL:0000216;6.91e-10;1!CL:0002601;6.91e-10;1!CL:0002379;6.91e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.72e-44,32;CL:0000192,3.37e-37,43;CL:0000514,3.37e-37,43;CL:0002595,1.16e-28,5;CL:0000187,1.39e-28,55;CL:0000680,5.51e-27,58;CL:0000056,5.51e-27,58;CL:0000355,5.51e-27,58;CL:0002592,1.22e-26,3;CL:0000393,1.52e-25,61;CL:0000211,1.52e-25,61;CL:0002593,2.04e-18,2;CL:0000222,8.03e-18,121;CL:0002539,4.31e-14,10;CL:0002494,1.61e-13,16;CL:0000511,4.44e-10,1;CL:0002625,4.44e-10,1;CL:0000216,4.44e-10,1;CL:0002379,8.24e-10,1;CL:0002601,9.82e-10,1;CL:0002321,2.72e-09,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.40e-28;43!CL:0000355;3.49e-13;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;2.16e-10;1!DOID:3347;3.10e-10;1!DOID:3620;6.91e-10;1!DOID:3565;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.37e-10,1;DOID:3347,2.59e-10,1;DOID:3620,8.24e-10,1;DOID:3565,8.24e-10,1 | |||
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|short_description=p@chr11:102662218..102662229,- | |short_description=p@chr11:102662218..102662229,- | ||
}} | }} |
Latest revision as of 17:30, 23 July 2015
Short description: | p@chr11:102662218..102662229, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102662218..102662229, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.72e-44 | 32 |
smooth muscle cell | 3.37e-37 | 43 |
smooth muscle myoblast | 3.37e-37 | 43 |
smooth muscle cell of the subclavian artery | 1.16e-28 | 5 |
muscle cell | 1.39e-28 | 55 |
muscle precursor cell | 5.51e-27 | 58 |
myoblast | 5.51e-27 | 58 |
multi-potent skeletal muscle stem cell | 5.51e-27 | 58 |
smooth muscle cell of the coronary artery | 1.22e-26 | 3 |
electrically responsive cell | 1.52e-25 | 61 |
electrically active cell | 1.52e-25 | 61 |
smooth muscle cell of the internal thoracic artery | 2.04e-18 | 2 |
mesodermal cell | 8.03e-18 | 121 |
aortic smooth muscle cell | 4.31e-14 | 10 |
cardiocyte | 1.61e-13 | 16 |
androgen binding protein secreting cell | 4.44e-10 | 1 |
seminiferous tubule epithelial cell | 4.44e-10 | 1 |
Sertoli cell | 4.44e-10 | 1 |
meningothelial cell | 8.24e-10 | 1 |
uterine smooth muscle cell | 9.82e-10 | 1 |
embryonic cell | 2.72e-09 | 250 |
Ontology term | p-value | n |
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