FFCP PHASE1:Hg19::chr11:102665942..102665954,-: Difference between revisions
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|id=chr11:102665942..102665954,-
|short_description=p@chr11:102665942..102665954,-
|description=CAGE_peak_at_chr11:102665942..102665954,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:102665942..102665954,- | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_at_chr11:102665942..102665954,- | |||
|id=chr11:102665942..102665954,- | |||
|ontology_enrichment_celltype=CL:0000359!4.35e-29!32;CL:0000192!8.46e-23!42;CL:0000514!8.46e-23!42;CL:0000055!8.49e-18!180;CL:0000187!2.74e-16!54;CL:0000183!7.35e-16!59;CL:0000680!4.24e-15!57;CL:0000056!4.24e-15!57;CL:0000355!4.24e-15!57;CL:0002539!8.96e-15!10;CL:0000393!4.95e-14!60;CL:0000211!4.95e-14!60;CL:0000222!1.78e-13!119;CL:0000057!1.56e-10!75;CL:0002594!8.17e-10!4;CL:1000306!1.10e-09!4;CL:0002547!1.10e-09!4;CL:0000048!9.29e-09!430;CL:0002595!1.26e-08!5;CL:0000723!2.04e-08!436;CL:0002494!2.70e-08!16;CL:0000034!5.61e-08!444;CL:0002371!2.32e-07!591;CL:0000220!2.53e-07!246;CL:0002321!3.50e-07!248;CL:0002139!4.19e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.24e-40;32!CL:0000192;2.18e-22;43!CL:0002539;6.50e-21;10!CL:0002593;7.41e-18;2!CL:0002595;5.47e-16;5!CL:0000187;3.50e-12;55!CL:0000393;5.85e-10;61!CL:0000211;5.85e-10;61!CL:0002591;1.55e-09;1!CL:0000569;2.04e-09;4!CL:0002494;1.23e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.85e-42,32;CL:0000192,9.81e-31,43;CL:0000514,9.81e-31,43;CL:0000187,1.50e-23,55;CL:0000680,3.23e-22,58;CL:0000056,3.23e-22,58;CL:0000355,3.23e-22,58;CL:0002539,4.77e-21,10;CL:0000393,5.14e-21,61;CL:0000211,5.14e-21,61;CL:0002593,8.80e-18,2;CL:0002595,6.06e-16,5;CL:0000222,4.22e-11,121;CL:0002591,2.08e-09,1;CL:0000569,2.17e-09,4;CL:0000011,2.17e-09,4;CL:0002494,1.18e-08,16;CL:0002321,1.25e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.18e-22;43!CL:0000355;1.12e-10;58!CL:0000011;2.04e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!9.19e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:201;7.20e-13;6!DOID:0060100;7.20e-13;6!DOID:0060085;1.55e-09;1!DOID:3165;1.55e-09;1!DOID:0060121;1.55e-09;1!DOID:2438;1.55e-09;1!DOID:4418;1.55e-09;1!DOID:3112;1.55e-09;1!DOID:3347;1.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:201,8.67e-13,6;DOID:0060100,8.67e-13,6;DOID:3112,1.25e-09,1;DOID:0060085,1.48e-09,1;DOID:3165,1.48e-09,1;DOID:0060121,1.48e-09,1;DOID:2438,1.48e-09,1;DOID:4418,1.48e-09,1;DOID:3347,1.62e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.97e-41!42;UBERON:0003509!2.97e-41!42;UBERON:0004572!2.97e-41!42;UBERON:0000055!1.05e-32!69;UBERON:0004573!1.83e-30!33;UBERON:0004571!1.83e-30!33;UBERON:0001981!3.45e-30!60;UBERON:0007500!3.45e-30!60;UBERON:0004537!3.45e-30!60;UBERON:0006965!3.45e-30!60;UBERON:0004872!6.48e-29!84;UBERON:0002049!3.05e-27!79;UBERON:0007798!3.05e-27!79;UBERON:0004535!5.74e-25!110;UBERON:0001009!5.42e-24!113;UBERON:0003914!4.35e-21!118;UBERON:0000947!4.25e-19!21;UBERON:0010191!4.25e-19!21;UBERON:0004290!8.16e-18!70;UBERON:0000914!1.06e-17!83;UBERON:0002329!1.06e-17!83;UBERON:0003077!1.06e-17!83;UBERON:0003059!1.06e-17!83;UBERON:0007282!1.06e-17!83;UBERON:0009618!1.06e-17!83;UBERON:0007285!1.06e-17!83;UBERON:0000486!2.12e-15!82;UBERON:0004237!8.96e-15!10;UBERON:0004695!8.96e-15!10;UBERON:0002111!8.96e-15!10;UBERON:0004178!8.96e-15!10;UBERON:0001134!1.06e-13!61;UBERON:0002036!1.06e-13!61;UBERON:0003082!1.06e-13!61;UBERON:0002385!4.53e-13!63;UBERON:0001015!4.53e-13!63;UBERON:0000383!4.53e-13!63;UBERON:0000477!8.35e-11!286;UBERON:0004111!8.77e-11!241;UBERON:0005256!1.69e-10!143;UBERON:0000490!1.85e-10!138;UBERON:0001310!8.17e-10!4;UBERON:0000415!1.10e-09!4;UBERON:0007240!1.10e-09!4;UBERON:0005742!1.10e-09!4;UBERON:0005734!1.10e-09!4;UBERON:0004664!1.10e-09!4;UBERON:0004663!1.10e-09!4;UBERON:0001135!2.65e-09!15;UBERON:0003834!1.26e-08!5;UBERON:0001533!1.26e-08!5;UBERON:0000025!1.31e-08!194;UBERON:0000483!1.88e-08!309;UBERON:0000119!3.01e-08!312;UBERON:0003081!1.86e-07!216;UBERON:0003102!3.24e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.24e-26;42!UBERON:0003509;2.24e-26;42!UBERON:0004572;2.24e-26;42!UBERON:0004573;2.98e-26;33!UBERON:0004571;2.98e-26;33!UBERON:0004237;6.50e-21;10!UBERON:0004695;6.50e-21;10!UBERON:0002111;6.50e-21;10!UBERON:0004178;6.50e-21;10!UBERON:0002456;7.41e-18;2!UBERON:0003834;5.47e-16;5!UBERON:0001533;5.47e-16;5!UBERON:0007500;1.02e-14;56!UBERON:0001981;1.02e-14;56!UBERON:0004537;1.02e-14;56!UBERON:0001135;6.55e-14;15!UBERON:0003513;1.41e-11;7!UBERON:0000947;6.83e-10;21!UBERON:0010191;6.83e-10;21!UBERON:0000055;8.82e-09;65!UBERON:0003914;2.53e-08;74!UBERON:0002049;2.02e-07;75!UBERON:0007798;2.02e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.50e-36,42;UBERON:0003509,1.50e-36,42;UBERON:0004572,1.50e-36,42;UBERON:0004573,2.91e-29,33;UBERON:0004571,2.91e-29,33;UBERON:0004872,3.58e-26,83;UBERON:0007500,2.46e-25,59;UBERON:0001981,2.46e-25,59;UBERON:0004537,2.46e-25,59;UBERON:0006965,2.46e-25,59;UBERON:0000055,1.16e-21,68;UBERON:0004237,4.77e-21,10;UBERON:0004695,4.77e-21,10;UBERON:0002111,4.77e-21,10;UBERON:0004178,4.77e-21,10;UBERON:0002329,1.03e-20,71;UBERON:0003059,1.03e-20,71;UBERON:0007282,1.03e-20,71;UBERON:0004290,1.03e-20,71;UBERON:0009618,1.03e-20,71;UBERON:0001134,1.22e-20,62;UBERON:0002036,1.22e-20,62;UBERON:0003082,1.22e-20,62;UBERON:0003077,2.15e-20,72;UBERON:0007285,2.15e-20,72;UBERON:0007524,4.42e-20,73;UBERON:0002385,6.32e-20,64;UBERON:0001015,6.32e-20,64;UBERON:0000383,6.32e-20,64;UBERON:0004535,3.13e-19,109;UBERON:0007503,1.23e-18,78;UBERON:0001009,1.23e-18,112;UBERON:0002049,1.42e-18,78;UBERON:0007798,1.42e-18,78;UBERON:0002456,8.80e-18,2;UBERON:0003914,1.03e-17,117;UBERON:0000486,2.28e-17,83;UBERON:0003834,6.06e-16,5;UBERON:0001533,6.06e-16,5;UBERON:0001135,5.35e-14,15;UBERON:0000490,1.21e-11,148;UBERON:0003513,1.51e-11,7;UBERON:0005256,4.98e-11,122;UBERON:0003081,3.69e-10,203;UBERON:0000947,5.92e-10,21;UBERON:0010191,5.92e-10,21;UBERON:0000025,1.49e-09,192;UBERON:0000948,1.38e-08,24;UBERON:0005498,1.38e-08,24;UBERON:0004140,1.38e-08,24;UBERON:0009881,1.38e-08,24;UBERON:0004141,1.38e-08,24;UBERON:0003084,1.38e-08,24;UBERON:0007005,1.38e-08,24;UBERON:0004139,1.38e-08,24;UBERON:0004291,1.38e-08,24;UBERON:0002204,1.47e-08,167;UBERON:0000926,3.27e-08,315;UBERON:0004120,3.27e-08,315;UBERON:0006603,3.27e-08,315;UBERON:0003104,8.00e-08,160;UBERON:0009142,8.00e-08,160;UBERON:0007100,1.31e-07,27;UBERON:0003498,1.32e-07,5;UBERON:0005985,1.32e-07,5;UBERON:0004111,4.80e-07,240 | |||
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|short_description=p@chr11:102665942..102665954,- | |||
}} | }} |
Latest revision as of 17:30, 23 July 2015
Short description: | p@chr11:102665942..102665954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102665942..102665954, - |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.85e-42 | 32 |
smooth muscle cell | 9.81e-31 | 43 |
smooth muscle myoblast | 9.81e-31 | 43 |
muscle cell | 1.50e-23 | 55 |
muscle precursor cell | 3.23e-22 | 58 |
myoblast | 3.23e-22 | 58 |
multi-potent skeletal muscle stem cell | 3.23e-22 | 58 |
aortic smooth muscle cell | 4.77e-21 | 10 |
electrically responsive cell | 5.14e-21 | 61 |
electrically active cell | 5.14e-21 | 61 |
smooth muscle cell of the internal thoracic artery | 8.80e-18 | 2 |
smooth muscle cell of the subclavian artery | 6.06e-16 | 5 |
mesodermal cell | 4.22e-11 | 121 |
smooth muscle cell of the pulmonary artery | 2.08e-09 | 1 |
cardiac mesenchymal cell | 2.17e-09 | 4 |
migratory trunk neural crest cell | 2.17e-09 | 4 |
cardiocyte | 1.18e-08 | 16 |
embryonic cell | 1.25e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 8.67e-13 | 6 |
musculoskeletal system cancer | 8.67e-13 | 6 |
papillary adenocarcinoma | 1.25e-09 | 1 |
organ system benign neoplasm | 1.48e-09 | 1 |
skin benign neoplasm | 1.48e-09 | 1 |
integumentary system benign neoplasm | 1.48e-09 | 1 |
dermis tumor | 1.48e-09 | 1 |
cutaneous fibrous histiocytoma | 1.48e-09 | 1 |
osteosarcoma | 1.62e-09 | 1 |