FFCP PHASE1:Hg19::chr12:105863636..105863650,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:105863636..105863650,+ | |||
|coexpression_cluster_id=C381 | |coexpression_cluster_id=C381 | ||
|description=CAGE_peak_at_chr12:105863636..105863650,+ | |description=CAGE_peak_at_chr12:105863636..105863650,+ | ||
|id=chr12:105863636..105863650,+ | |id=chr12:105863636..105863650,+ | ||
|ontology_enrichment_celltype=CL:0002139;8.28e-117;24!CL:0000115;2.86e-92;36!CL:0000071;1.31e-90;18!CL:1000413;7.17e-58;9!CL:0002078;1.28e-55;45!CL:0002543;6.85e-40;6!CL:0000213;1.95e-39;58!CL:0000215;1.95e-39;58!CL:0002544;4.51e-39;6!CL:0002138;2.90e-27;6!CL:0002618;4.64e-21;3!CL:0000076;9.60e-15;63!CL:0002545;2.63e-14;2!CL:0002188;6.18e-12;5!CL:1000746;1.14e-08;7!CL:1000612;1.14e-08;7 | |ontology_enrichment_celltype=CL:0002139!1.40e-78!24;CL:0000115!2.15e-73!35;CL:0002078!1.89e-61!44;CL:0000071!7.56e-56!18;CL:0002546!7.56e-56!18;CL:0000213!7.55e-46!57;CL:0000215!7.55e-46!57;CL:1000413!3.72e-36!9;CL:0000222!3.36e-31!119;CL:0002543!4.05e-25!6;CL:0002544!1.21e-24!6;CL:0005020!3.87e-24!6;CL:0002138!3.87e-24!6;CL:0005022!3.87e-24!6;CL:0002618!1.42e-13!3;CL:0000076!2.26e-13!62;CL:0000220!1.20e-11!246;CL:0002321!1.73e-11!248;CL:0000666!1.93e-09!4;CL:0002188!1.93e-09!4;CL:0002545!2.05e-09!2;CL:1000612!3.30e-09!7;CL:1000746!3.30e-09!7;CL:0002595!2.28e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;8.28e-117;24!CL:0000115;2.86e-92;36!CL:0000071;1.31e-90;18!CL:1000413;7.17e-58;9!CL:0002078;1.28e-55;45!CL:0002543;6.85e-40;6!CL:0000213;1.95e-39;58!CL:0000215;1.95e-39;58!CL:0002544;4.51e-39;6!CL:0002138;2.90e-27;6!CL:0002618;4.64e-21;3!CL:0000076;9.60e-15;63!CL:0002545;2.63e-14;2!CL:0002188;6.18e-12;5!CL:1000746;1.14e-08;7!CL:1000612;1.14e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.02e-116,24;CL:0000115,7.47e-109,36;CL:0000071,1.27e-90,18;CL:0002546,1.27e-90,18;CL:0002078,3.46e-86,45;CL:0000213,7.46e-66,58;CL:0000215,7.46e-66,58;CL:1000413,6.73e-58,9;CL:0000222,3.14e-40,121;CL:0002543,7.09e-40,6;CL:0002544,4.23e-39,6;CL:0005020,3.61e-27,6;CL:0002138,3.61e-27,6;CL:0005022,3.61e-27,6;CL:0000076,1.33e-23,63;CL:0002618,4.65e-21,3;CL:0002321,1.10e-16,250;CL:0002545,2.63e-14,2;CL:0002188,5.20e-12,5;CL:0000066,1.98e-11,253;CL:1000746,1.01e-08,7;CL:1000612,1.01e-08,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.31e-90;18!CL:0005022;2.90e-27;6!CL:0000222;3.50e-12;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;1.31e-90;18!UBERON:0001986;1.31e-90;18!UBERON:0004852;1.31e-90;18!UBERON:0000487;1.44e-73;22!UBERON:0006914;2.31e-64;25!UBERON:0003915;7.17e-58;9!UBERON:0004700;7.17e-58;9!UBERON:0001917;7.17e-58;9!UBERON:0000490;3.72e-44;33!UBERON:0000055;6.86e-33;65!UBERON:0007500;6.64e-28;56!UBERON:0001981;6.64e-28;56!UBERON:0004537;6.64e-28;56!UBERON:0001638;1.89e-26;9!UBERON:0003920;1.89e-26;9!UBERON:0004582;1.89e-26;9!UBERON:0002049;1.03e-24;75!UBERON:0007798;1.03e-24;75!UBERON:0001637;2.60e-23;42!UBERON:0003509;2.60e-23;42!UBERON:0004572;2.60e-23;42!UBERON:0003914;8.44e-22;74!UBERON:0001473;2.02e-20;8!UBERON:0004536;2.02e-20;8!UBERON:0006558;2.02e-20;8!UBERON:0004573;1.70e-17;33!UBERON:0004571;1.70e-17;33!UBERON:0002465;2.62e-16;10!UBERON:0000025;2.77e-16;93!UBERON:0000947;1.94e-14;21!UBERON:0010191;1.94e-14;21!UBERON:0005800;2.63e-14;2!UBERON:0001515;2.63e-14;2!UBERON:0004535;7.21e-14;109!UBERON:0001009;1.67e-13;112!UBERON:0002066;7.44e-13;5!UBERON:0000119;3.86e-12;139!UBERON:0010260;4.85e-12;9!UBERON:0004111;1.32e-10;130!UBERON:0000483;9.30e-10;136!UBERON:0000074;1.14e-08;7!UBERON:0001229;1.14e-08;7!UBERON:0000353;6.37e-07;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!7.56e-56!18;UBERON:0004638!7.56e-56!18;UBERON:0004852!7.56e-56!18;UBERON:0000055!2.94e-49!69;UBERON:0000487!5.97e-45!22;UBERON:0002049!6.13e-45!79;UBERON:0007798!6.13e-45!79;UBERON:0006914!6.38e-44!25;UBERON:0004535!8.71e-37!110;UBERON:0003915!3.72e-36!9;UBERON:0004700!3.72e-36!9;UBERON:0001917!3.72e-36!9;UBERON:0001981!3.80e-36!60;UBERON:0007500!3.80e-36!60;UBERON:0004537!3.80e-36!60;UBERON:0006965!3.80e-36!60;UBERON:0001009!1.38e-35!113;UBERON:0004872!3.36e-33!84;UBERON:0003914!3.63e-29!118;UBERON:0001637!1.01e-20!42;UBERON:0003509!1.01e-20!42;UBERON:0004572!1.01e-20!42;UBERON:0004111!5.61e-20!241;UBERON:0000025!4.06e-18!194;UBERON:0001473!6.09e-18!8;UBERON:0004536!6.09e-18!8;UBERON:0006558!6.09e-18!8;UBERON:0000477!1.84e-17!286;UBERON:0001638!1.63e-16!9;UBERON:0003920!1.63e-16!9;UBERON:0004582!1.63e-16!9;UBERON:0004573!7.51e-15!33;UBERON:0004571!7.51e-15!33;UBERON:0002465!3.22e-14!10;UBERON:0003081!3.09e-13!216;UBERON:0000483!2.11e-11!309;UBERON:0000119!3.30e-11!312;UBERON:0000490!5.38e-11!138;UBERON:0005800!2.05e-09!2;UBERON:0001515!2.05e-09!2;UBERON:0000074!3.30e-09!7;UBERON:0001229!3.30e-09!7;UBERON:0001230!3.30e-09!7;UBERON:0005749!3.30e-09!7;UBERON:0004199!3.30e-09!7;UBERON:0004209!3.30e-09!7;UBERON:0004198!3.30e-09!7;UBERON:0000947!1.11e-08!21;UBERON:0010191!1.11e-08!21;UBERON:0002081!1.24e-08!2;UBERON:0002066!2.68e-08!5;UBERON:0003513!6.97e-08!8;UBERON:0003834!2.28e-07!5;UBERON:0001533!2.28e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.31e-90;18!UBERON:0001986;1.31e-90;18!UBERON:0004852;1.31e-90;18!UBERON:0000487;1.44e-73;22!UBERON:0006914;2.31e-64;25!UBERON:0003915;7.17e-58;9!UBERON:0004700;7.17e-58;9!UBERON:0001917;7.17e-58;9!UBERON:0000490;3.72e-44;33!UBERON:0000055;6.86e-33;65!UBERON:0007500;6.64e-28;56!UBERON:0001981;6.64e-28;56!UBERON:0004537;6.64e-28;56!UBERON:0001638;1.89e-26;9!UBERON:0003920;1.89e-26;9!UBERON:0004582;1.89e-26;9!UBERON:0002049;1.03e-24;75!UBERON:0007798;1.03e-24;75!UBERON:0001637;2.60e-23;42!UBERON:0003509;2.60e-23;42!UBERON:0004572;2.60e-23;42!UBERON:0003914;8.44e-22;74!UBERON:0001473;2.02e-20;8!UBERON:0004536;2.02e-20;8!UBERON:0006558;2.02e-20;8!UBERON:0004573;1.70e-17;33!UBERON:0004571;1.70e-17;33!UBERON:0002465;2.62e-16;10!UBERON:0000025;2.77e-16;93!UBERON:0000947;1.94e-14;21!UBERON:0010191;1.94e-14;21!UBERON:0005800;2.63e-14;2!UBERON:0001515;2.63e-14;2!UBERON:0004535;7.21e-14;109!UBERON:0001009;1.67e-13;112!UBERON:0002066;7.44e-13;5!UBERON:0000119;3.86e-12;139!UBERON:0010260;4.85e-12;9!UBERON:0004111;1.32e-10;130!UBERON:0000483;9.30e-10;136!UBERON:0000074;1.14e-08;7!UBERON:0001229;1.14e-08;7!UBERON:0000353;6.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.27e-90,18;UBERON:0001986,1.27e-90,18;UBERON:0004852,1.27e-90,18;UBERON:0000487,1.41e-73,22;UBERON:0000055,7.72e-65,68;UBERON:0006914,2.27e-64,25;UBERON:0003915,6.73e-58,9;UBERON:0004700,6.73e-58,9;UBERON:0001917,6.73e-58,9;UBERON:0002049,6.41e-56,78;UBERON:0007798,6.41e-56,78;UBERON:0007500,6.00e-49,59;UBERON:0001981,6.00e-49,59;UBERON:0004537,6.00e-49,59;UBERON:0006965,6.00e-49,59;UBERON:0004535,7.81e-42,109;UBERON:0001009,1.39e-40,112;UBERON:0004872,6.66e-37,83;UBERON:0003914,1.31e-32,117;UBERON:0001637,2.90e-27,42;UBERON:0003509,2.90e-27,42;UBERON:0004572,2.90e-27,42;UBERON:0001638,1.93e-26,9;UBERON:0003920,1.93e-26,9;UBERON:0004582,1.93e-26,9;UBERON:0004111,8.04e-21,240;UBERON:0001473,2.37e-20,8;UBERON:0004536,2.37e-20,8;UBERON:0006558,2.37e-20,8;UBERON:0000025,7.37e-18,192;UBERON:0004573,1.04e-17,33;UBERON:0004571,1.04e-17,33;UBERON:0003081,1.25e-16,203;UBERON:0002465,2.98e-16,10;UBERON:0000490,3.12e-15,148;UBERON:0000947,2.06e-14,21;UBERON:0010191,2.06e-14,21;UBERON:0005800,2.63e-14,2;UBERON:0001515,2.63e-14,2;UBERON:0002066,7.45e-13,5;UBERON:0010260,4.33e-12,9;UBERON:0000483,2.20e-09,306;UBERON:0000119,3.04e-09,309;UBERON:0000926,5.67e-09,315;UBERON:0004120,5.67e-09,315;UBERON:0006603,5.67e-09,315;UBERON:0010532,1.01e-08,7;UBERON:0000074,1.01e-08,7;UBERON:0001229,1.01e-08,7;UBERON:0001230,1.01e-08,7;UBERON:0003220,1.01e-08,7;UBERON:0005749,1.01e-08,7;UBERON:0004199,1.01e-08,7;UBERON:0004209,1.01e-08,7;UBERON:0004198,1.01e-08,7;UBERON:0005103,1.09e-07,8;UBERON:0000083,1.09e-07,8;UBERON:0009201,1.09e-07,8;UBERON:0006553,1.09e-07,8;UBERON:0003074,1.09e-07,8;UBERON:0003060,1.09e-07,8;UBERON:0000353,5.78e-07,15;UBERON:0000080,6.97e-07,9;UBERON:0002120,6.97e-07,9;UBERON:0004875,6.97e-07,9;UBERON:0005721,6.97e-07,9;UBERON:0005754,6.97e-07,9;UBERON:0007297,6.97e-07,9 | |||
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|short_description=p@chr12:105863636..105863650,+ | |short_description=p@chr12:105863636..105863650,+ | ||
}} | }} |
Latest revision as of 04:24, 24 July 2015
Short description: | p@chr12:105863636..105863650, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:105863636..105863650, + |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.02e-116 | 24 |
endothelial cell | 7.47e-109 | 36 |
blood vessel endothelial cell | 1.27e-90 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-90 | 18 |
meso-epithelial cell | 3.46e-86 | 45 |
lining cell | 7.46e-66 | 58 |
barrier cell | 7.46e-66 | 58 |
endothelial cell of artery | 6.73e-58 | 9 |
mesodermal cell | 3.14e-40 | 121 |
vein endothelial cell | 7.09e-40 | 6 |
aortic endothelial cell | 4.23e-39 | 6 |
lymphangioblast | 3.61e-27 | 6 |
endothelial cell of lymphatic vessel | 3.61e-27 | 6 |
vascular lymphangioblast | 3.61e-27 | 6 |
squamous epithelial cell | 1.33e-23 | 63 |
endothelial cell of umbilical vein | 4.65e-21 | 3 |
embryonic cell | 1.10e-16 | 250 |
thoracic aorta endothelial cell | 2.63e-14 | 2 |
glomerular endothelial cell | 5.20e-12 | 5 |
epithelial cell | 1.98e-11 | 253 |
glomerular cell | 1.01e-08 | 7 |
kidney corpuscule cell | 1.01e-08 | 7 |