FFCP PHASE1:Hg19::chr12:3475259..3475300,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:3475259..3475300,-
|short_description=p@chr12:3475259..3475300,-
|description=CAGE_peak_at_chr12:3475259..3475300,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:3475259..3475300,- | |||
|description=CAGE_peak_at_chr12:3475259..3475300,- | |||
|id=chr12:3475259..3475300,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.13e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.92e-12!143;DOID:305!2.00e-11!106;DOID:1325!3.72e-08!7;DOID:3904!3.72e-08!7;DOID:1749!1.20e-07!14;DOID:0050615!7.03e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:171;2.27e-10;10!DOID:1749;8.65e-09;14!DOID:1325;1.21e-08;7!DOID:3904;1.21e-08;7!DOID:0050615;2.70e-08;16!DOID:1324;7.34e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.18e-10,10;DOID:0050687,7.66e-09,143;DOID:1749,7.78e-09,14;DOID:1325,1.21e-08,7;DOID:3904,1.21e-08,7;DOID:0050615,2.44e-08,16;DOID:305,2.89e-07,106;DOID:1324,6.72e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.39e-24!34;UBERON:0002020!2.04e-24!34;UBERON:0003528!2.04e-24!34;UBERON:0002619!4.47e-24!22;UBERON:0001869!5.92e-24!32;UBERON:0002791!1.45e-23!33;UBERON:0001950!1.05e-22!20;UBERON:0001049!1.50e-22!57;UBERON:0005068!1.50e-22!57;UBERON:0006241!1.50e-22!57;UBERON:0007135!1.50e-22!57;UBERON:0000073!4.97e-21!94;UBERON:0001016!4.97e-21!94;UBERON:0002780!5.14e-21!41;UBERON:0001890!5.14e-21!41;UBERON:0006240!5.14e-21!41;UBERON:0005743!1.07e-20!86;UBERON:0001017!1.40e-20!82;UBERON:0000924!2.83e-20!173;UBERON:0006601!2.83e-20!173;UBERON:0003080!3.11e-20!42;UBERON:0000956!3.40e-20!25;UBERON:0000203!3.40e-20!25;UBERON:0002616!4.91e-20!59;UBERON:0000955!2.42e-19!69;UBERON:0006238!2.42e-19!69;UBERON:0004121!1.10e-18!169;UBERON:0002346!2.41e-18!90;UBERON:0003075!1.32e-16!86;UBERON:0007284!1.32e-16!86;UBERON:0007023!1.81e-16!115;UBERON:0000153!2.08e-15!129;UBERON:0007811!2.08e-15!129;UBERON:0000033!3.29e-15!123;UBERON:0003056!4.13e-13!61;UBERON:0001871!3.04e-09!7;UBERON:0000922!1.04e-08!612;UBERON:0000062!2.59e-08!511;UBERON:0000200!1.03e-07!6;UBERON:0000468!2.88e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.93e-44;20!UBERON:0002619;4.63e-43;22!UBERON:0000956;2.67e-37;25!UBERON:0000203;2.67e-37;25!UBERON:0001869;7.85e-36;32!UBERON:0002791;3.70e-33;32!UBERON:0001893;1.00e-32;34!UBERON:0003528;2.30e-30;34!UBERON:0002020;2.30e-30;34!UBERON:0002780;7.76e-21;41!UBERON:0001890;7.76e-21;41!UBERON:0001871;5.82e-15;6!UBERON:0000073;6.13e-14;53!UBERON:0002616;6.13e-14;53!UBERON:0000200;1.10e-13;6!UBERON:0002021;5.36e-12;5!UBERON:0001872;9.61e-12;5!UBERON:0000955;9.91e-12;68!UBERON:0001017;2.55e-11;75!UBERON:0001016;9.66e-10;83!UBERON:0001870;1.02e-07;3!UBERON:0002114;3.83e-07;2!UBERON:0000349;9.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.26e-44,20;UBERON:0002619,4.38e-43,22;UBERON:0001869,3.03e-40,32;UBERON:0001893,1.76e-37,34;UBERON:0000956,2.54e-37,25;UBERON:0000203,2.54e-37,25;UBERON:0002791,7.39e-37,32;UBERON:0003528,2.62e-34,34;UBERON:0002020,2.62e-34,34;UBERON:0002780,6.82e-30,41;UBERON:0001890,6.82e-30,41;UBERON:0003080,6.82e-30,41;UBERON:0006240,6.82e-30,41;UBERON:0000073,4.39e-25,53;UBERON:0002616,4.39e-25,53;UBERON:0000955,5.94e-24,68;UBERON:0006238,5.94e-24,68;UBERON:0001049,2.52e-23,56;UBERON:0005068,2.52e-23,56;UBERON:0006241,2.52e-23,56;UBERON:0007135,2.52e-23,56;UBERON:0001016,7.90e-23,89;UBERON:0001017,1.33e-21,81;UBERON:0003056,2.62e-19,61;UBERON:0011216,3.48e-18,223;UBERON:0004121,5.88e-18,171;UBERON:0000924,5.88e-18,171;UBERON:0006601,5.88e-18,171;UBERON:0002346,1.48e-17,86;UBERON:0001871,5.20e-15,6;UBERON:0003075,1.08e-14,82;UBERON:0007284,1.08e-14,82;UBERON:0010371,7.60e-14,104;UBERON:0000200,8.31e-14,6;UBERON:0002021,7.71e-12,5;UBERON:0001872,8.07e-12,5;UBERON:0007023,2.41e-11,114;UBERON:0001870,8.61e-08,3;UBERON:0004111,9.35e-08,240;UBERON:0010314,9.93e-08,132;UBERON:0002114,4.41e-07,2;UBERON:0000349,8.29e-07,5 | |||
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| ||
|short_description=p@chr12:3475259..3475300,- | |||
}} | }} |
Latest revision as of 08:16, 24 July 2015
Short description: | p@chr12:3475259..3475300, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:3475259..3475300, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.18e-10 | 10 |
cell type cancer | 7.66e-09 | 143 |
squamous cell carcinoma | 7.78e-09 | 14 |
bronchus cancer | 1.21e-08 | 7 |
bronchogenic carcinoma | 1.21e-08 | 7 |
respiratory system cancer | 2.44e-08 | 16 |
carcinoma | 2.89e-07 | 106 |
lung cancer | 6.72e-07 | 15 |