FFCP PHASE1:Hg19::chr13:110830539..110830556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110830539..110830556,- | |||
|coexpression_cluster_id=C823 | |||
|description=CAGE_peak_at_chr13:110830539..110830556,- | |description=CAGE_peak_at_chr13:110830539..110830556,- | ||
|id=chr13:110830539..110830556,- | |id=chr13:110830539..110830556,- | ||
|ontology_enrichment_celltype=CL:1000612!1.05e-08!7;CL:1000746!1.05e-08!7;CL:1000449!2.06e-08!16;CL:0002681!1.58e-07!13;CL:0002584!1.58e-07!13;CL:0000222!2.27e-07!119;CL:0000055!3.39e-07!180;CL:1000497!4.66e-07!18;CL:0002518!4.66e-07!18 | |ontology_enrichment_celltype=CL:1000612!1.05e-08!7;CL:1000746!1.05e-08!7;CL:1000449!2.06e-08!16;CL:0002681!1.58e-07!13;CL:0002584!1.58e-07!13;CL:0000222!2.27e-07!119;CL:0000055!3.39e-07!180;CL:1000497!4.66e-07!18;CL:0002518!4.66e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000746;1.50e-16;7!CL:1000612;1.50e-16;7!CL:0002548;1.65e-12;6!CL:0000669;6.30e-11;4!CL:1000449;9.96e-11;15!CL:0000650;6.37e-10;2!CL:1000500;6.37e-10;2!CL:1000618;6.37e-10;2!CL:1001318;6.37e-10;2!CL:0002173;6.37e-10;2!CL:0002681;1.52e-09;12!CL:0002584;1.52e-09;12!CL:1000497;2.16e-09;17!CL:0002518;2.16e-09;17!CL:0002188;3.09e-09;5!CL:0000115;4.48e-08;36!CL:0002138;8.38e-08;6!CL:0002521;2.76e-07;3!CL:0002569;3.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,9.24e-17,7;CL:1000612,9.24e-17,7;CL:0002548,1.47e-12,6;CL:0000669,4.81e-11,4;CL:1000449,7.15e-11,15;CL:0000650,3.86e-10,2;CL:1000500,3.86e-10,2;CL:1000618,3.86e-10,2;CL:1001318,3.86e-10,2;CL:0002173,3.86e-10,2;CL:0002681,1.16e-09,12;CL:0002584,1.16e-09,12;CL:1000497,1.62e-09,17;CL:0002518,1.62e-09,17;CL:0002188,2.77e-09,5;CL:0000115,3.09e-09,36;CL:0005020,8.22e-08,6;CL:0002138,8.22e-08,6;CL:0005022,8.22e-08,6;CL:0002569,2.37e-07,6;CL:0002521,3.89e-07,3;CL:0002078,4.50e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;8.38e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000353!2.08e-09!17;UBERON:0000074!1.05e-08!7;UBERON:0001229!1.05e-08!7;UBERON:0001230!1.05e-08!7;UBERON:0005749!1.05e-08!7;UBERON:0004199!1.05e-08!7;UBERON:0004209!1.05e-08!7;UBERON:0004198!1.05e-08!7;UBERON:0004876!1.58e-08!20;UBERON:0004211!2.06e-08!16;UBERON:0001285!2.06e-08!16;UBERON:0007684!2.06e-08!16;UBERON:0003220!2.06e-08!16;UBERON:0004208!2.06e-08!16;UBERON:0000080!2.53e-08!18;UBERON:0002120!2.53e-08!18;UBERON:0004875!2.53e-08!18;UBERON:0005721!2.53e-08!18;UBERON:0005754!2.53e-08!18;UBERON:0007297!2.53e-08!18;UBERON:0002049!3.45e-08!79;UBERON:0007798!3.45e-08!79;UBERON:0003914!7.74e-08!118;UBERON:0006555!1.08e-07!17;UBERON:0005103!1.08e-07!17;UBERON:0000083!1.08e-07!17;UBERON:0009201!1.08e-07!17;UBERON:0004819!1.08e-07!17;UBERON:0006553!1.08e-07!17;UBERON:0003074!1.08e-07!17;UBERON:0003060!1.08e-07!17;UBERON:0001225!1.58e-07!13;UBERON:0008987!1.58e-07!13;UBERON:0003887!1.65e-07!21;UBERON:0001009!2.92e-07!113;UBERON:0004535!8.26e-07!110;UBERON:0003103!9.05e-07!69 | |ontology_enrichment_uberon=UBERON:0000353!2.08e-09!17;UBERON:0000074!1.05e-08!7;UBERON:0001229!1.05e-08!7;UBERON:0001230!1.05e-08!7;UBERON:0005749!1.05e-08!7;UBERON:0004199!1.05e-08!7;UBERON:0004209!1.05e-08!7;UBERON:0004198!1.05e-08!7;UBERON:0004876!1.58e-08!20;UBERON:0004211!2.06e-08!16;UBERON:0001285!2.06e-08!16;UBERON:0007684!2.06e-08!16;UBERON:0003220!2.06e-08!16;UBERON:0004208!2.06e-08!16;UBERON:0000080!2.53e-08!18;UBERON:0002120!2.53e-08!18;UBERON:0004875!2.53e-08!18;UBERON:0005721!2.53e-08!18;UBERON:0005754!2.53e-08!18;UBERON:0007297!2.53e-08!18;UBERON:0002049!3.45e-08!79;UBERON:0007798!3.45e-08!79;UBERON:0003914!7.74e-08!118;UBERON:0006555!1.08e-07!17;UBERON:0005103!1.08e-07!17;UBERON:0000083!1.08e-07!17;UBERON:0009201!1.08e-07!17;UBERON:0004819!1.08e-07!17;UBERON:0006553!1.08e-07!17;UBERON:0003074!1.08e-07!17;UBERON:0003060!1.08e-07!17;UBERON:0001225!1.58e-07!13;UBERON:0008987!1.58e-07!13;UBERON:0003887!1.65e-07!21;UBERON:0001009!2.92e-07!113;UBERON:0004535!8.26e-07!110;UBERON:0003103!9.05e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.50e-16;7!UBERON:0001229;1.50e-16;7!UBERON:0006555;9.96e-11;15!UBERON:0004819;9.96e-11;15!UBERON:0001285;9.96e-11;15!UBERON:0007684;9.96e-11;15!UBERON:0000353;1.39e-10;15!UBERON:0003567;6.37e-10;2!UBERON:0003838;6.37e-10;2!UBERON:0003586;6.37e-10;2!UBERON:0005169;6.37e-10;2!UBERON:0002321;6.37e-10;2!UBERON:0005215;6.37e-10;2!UBERON:0002303;6.37e-10;2!UBERON:0002319;6.37e-10;2!UBERON:0001225;1.52e-09;12!UBERON:0008987;1.52e-09;12!UBERON:0001851;1.42e-07;15!UBERON:0002331;1.85e-07;10!UBERON:0002190;2.76e-07;3!UBERON:0003422;3.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,9.24e-17,7;UBERON:0000074,9.24e-17,7;UBERON:0001229,9.24e-17,7;UBERON:0001230,9.24e-17,7;UBERON:0003220,9.24e-17,7;UBERON:0005749,9.24e-17,7;UBERON:0004199,9.24e-17,7;UBERON:0004209,9.24e-17,7;UBERON:0004198,9.24e-17,7;UBERON:0004876,6.94e-15,11;UBERON:0005103,1.24e-14,8;UBERON:0000083,1.24e-14,8;UBERON:0009201,1.24e-14,8;UBERON:0006553,1.24e-14,8;UBERON:0003074,1.24e-14,8;UBERON:0003060,1.24e-14,8;UBERON:0000080,5.59e-13,9;UBERON:0002120,5.59e-13,9;UBERON:0004875,5.59e-13,9;UBERON:0005721,5.59e-13,9;UBERON:0005754,5.59e-13,9;UBERON:0007297,5.59e-13,9;UBERON:0004211,7.15e-11,15;UBERON:0009773,7.15e-11,15;UBERON:0001231,7.15e-11,15;UBERON:0001285,7.15e-11,15;UBERON:0007684,7.15e-11,15;UBERON:0004208,7.15e-11,15;UBERON:0000353,9.83e-11,15;UBERON:0006555,3.75e-10,16;UBERON:0004819,3.75e-10,16;UBERON:0003567,3.86e-10,2;UBERON:0003838,3.86e-10,2;UBERON:0003586,3.86e-10,2;UBERON:0005169,3.86e-10,2;UBERON:0002321,3.86e-10,2;UBERON:0005215,3.86e-10,2;UBERON:0002303,3.86e-10,2;UBERON:0002319,3.86e-10,2;UBERON:0001225,1.16e-09,12;UBERON:0008987,1.16e-09,12;UBERON:0003887,1.16e-09,12;UBERON:0000058,2.43e-08,19;UBERON:0001851,1.15e-07,15;UBERON:0002331,1.56e-07,10;UBERON:0000358,1.56e-07,10;UBERON:0000307,1.56e-07,10;UBERON:0000091,1.56e-07,10;UBERON:0000087,1.56e-07,10;UBERON:0007010,1.56e-07,10;UBERON:0007806,1.56e-07,10;UBERON:0008780,1.56e-07,10;UBERON:0005728,1.56e-07,10;UBERON:0003422,2.37e-07,6;UBERON:0002417,3.30e-07,60;UBERON:0000916,3.30e-07,60;UBERON:0002190,3.89e-07,3 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.563817616383885,2.00146596706261,0.893922188854576,0.872338524100369,5.06599756336621,0,1.04474251279935,0,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.434539556882471,0,0,0.189069634328136,0.665188192387692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0,0,0.35576626268671,0.33472061276467,0.805658634218294,0,2.4406205754817,0,3.24056779152704,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,2.98183171017191,0.759783069987479,0,0.286836620748814,0,1.12135520028461,0,4.9333509683432,0,1.21239604862719,1.47115712802113,0.908144565869588,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.907457465280168,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0.194874010322397,0.252433774244115,0,0,0,0.201504196455281,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.821860859650752,2.02113026865503,2.77791307545966,2.85381228351897,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.766765358330422,0,0,0,0,0,0.126995788584338,0,0,0,0.514137463516618,0,0,0,0.87192013766656,0.36669142910475,0.387815147273333,0,3.381211010224,0.531876233169741,0,0,0,0,1.00084595560703,0,1.64648067356154,2.28015329005615,0.355391948742546,0.791951872933429,0.301439377059586,0,0.899756920638513,0,0,0,1.19812427745791,1.14861935834114,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0.623912584592421,1.07057393278297,0.630809660135739,0.117141414992713,0,0,0,0.664225598535437,0.368738337083406,0,0.391602314925481,2.05886054286514,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.128139149255701,0,1.12597744800525,0,0,0,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0,0,0.182091168006717,0.262248829918848,0.451199612907412,0.462092022626489,0,2.92278449306521,0.527758144464379,3.4120015221269,0.850468526382578,0.647747748306418,3.08454505380579,1.35473218771926,1.50506932156456,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0.435050081742686,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,1.5250415513906,0.255897791311334,0,0,0.78494864019923,0,1.09814811894422,0.824686816419805,0,0,0,0,1.70599442741899,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0.281695602532241,0,0.294747123039363,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0.638002319463839,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,1.58186518546373,0.411125773940253,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0,0.429226048136571,0.223171457441873,0.0671834724867263,2.52209918479682,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0.414706207840855,0.797525143673985,1.04349012362347,0.150257608997218,0,0.406870733204662,0.545545977607678,0.107410557042488,0,1.19428766609585,0,0,0.336749488765919,0,0,0,0.260994291965212,0.226705925512272,0,0,0.179088841081487,0,0,0,0.38582807654183,0,0.512483037175893,0.345430341731199,0,0,0,0,0,0.982829546539238,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0.42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| ||
|short_description=p@chr13:110830539..110830556,- | |short_description=p@chr13:110830539..110830556,- | ||
}} | }} |
Latest revision as of 14:30, 24 July 2015
Short description: | p@chr13:110830539..110830556, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110830539..110830556, - |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 9.24e-17 | 7 |
kidney corpuscule cell | 9.24e-17 | 7 |
cardiac fibroblast | 1.47e-12 | 6 |
pericyte cell | 4.81e-11 | 4 |
epithelial cell of nephron | 7.15e-11 | 15 |
mesangial cell | 3.86e-10 | 2 |
kidney interstitial cell | 3.86e-10 | 2 |
juxtaglomerular complex cell | 3.86e-10 | 2 |
renal interstitial pericyte | 3.86e-10 | 2 |
extraglomerular mesangial cell | 3.86e-10 | 2 |
kidney cortical cell | 1.16e-09 | 12 |
renal cortical epithelial cell | 1.16e-09 | 12 |
kidney cell | 1.62e-09 | 17 |
kidney epithelial cell | 1.62e-09 | 17 |
glomerular endothelial cell | 2.77e-09 | 5 |
endothelial cell | 3.09e-09 | 36 |
lymphangioblast | 8.22e-08 | 6 |
endothelial cell of lymphatic vessel | 8.22e-08 | 6 |
vascular lymphangioblast | 8.22e-08 | 6 |
mesenchymal stem cell of umbilical cord | 2.37e-07 | 6 |
subcutaneous fat cell | 3.89e-07 | 3 |
meso-epithelial cell | 4.50e-07 | 45 |