FFCP PHASE1:Hg19::chr16:2220383..2220402,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2220383..2220402,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr16:2220383..2220402,+ | |description=CAGE_peak_at_chr16:2220383..2220402,+ | ||
|id=chr16:2220383..2220402,+ | |id=chr16:2220383..2220402,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.79e-47!24;CL:0000115!3.53e-45!35;CL:0002078!3.23e-36!44;CL:0000071!5.70e-36!18;CL:0002546!5.70e-36!18;CL:0000213!1.22e-25!57;CL:0000215!1.22e-25!57;CL:1000413!7.51e-19!9;CL:0002544!4.36e-13!6;CL:0002543!5.33e-13!6;CL:0005020!1.85e-12!6;CL:0002138!1.85e-12!6;CL:0005022!1.85e-12!6;CL:0000222!1.23e-07!119;CL:0000076!2.14e-07!62;CL:0002144!2.26e-07!3;CL:0002618!2.94e-07!3 | |ontology_enrichment_celltype=CL:0002139!5.79e-47!24;CL:0000115!3.53e-45!35;CL:0002078!3.23e-36!44;CL:0000071!5.70e-36!18;CL:0002546!5.70e-36!18;CL:0000213!1.22e-25!57;CL:0000215!1.22e-25!57;CL:1000413!7.51e-19!9;CL:0002544!4.36e-13!6;CL:0002543!5.33e-13!6;CL:0005020!1.85e-12!6;CL:0002138!1.85e-12!6;CL:0005022!1.85e-12!6;CL:0000222!1.23e-07!119;CL:0000076!2.14e-07!62;CL:0002144!2.26e-07!3;CL:0002618!2.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.83e-118;24!CL:0000115;5.86e-103;36!CL:0000071;5.23e-90;18!CL:0002078;2.92e-61;45!CL:1000413;8.25e-46;9!CL:0000213;5.79e-44;58!CL:0000215;5.79e-44;58!CL:0002544;5.84e-31;6!CL:0002543;8.37e-31;6!CL:0002138;2.10e-29;6!CL:0002188;6.21e-17;5!CL:0002144;2.32e-16;3!CL:0002618;3.98e-16;3!CL:0000076;4.07e-14;63!CL:1000746;3.95e-12;7!CL:1000612;3.95e-12;7!CL:0002545;1.75e-11;2!CL:0002262;2.64e-11;2!CL:1000398;2.64e-11;2!CL:0002681;4.24e-07;12!CL:0002584;4.24e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.29e-123,36;CL:0002139,1.74e-118,24;CL:0002078,5.39e-97,45;CL:0000071,4.84e-90,18;CL:0002546,4.84e-90,18;CL:0000213,7.67e-74,58;CL:0000215,7.67e-74,58;CL:1000413,7.84e-46,9;CL:0000222,4.58e-32,121;CL:0002544,5.27e-31,6;CL:0002543,8.81e-31,6;CL:0005020,2.15e-29,6;CL:0002138,2.15e-29,6;CL:0005022,2.15e-29,6;CL:0000076,9.24e-23,63;CL:0002188,6.21e-17,5;CL:0002144,2.15e-16,3;CL:0002618,4.19e-16,3;CL:0002321,4.20e-13,250;CL:0000066,5.02e-13,253;CL:1000746,3.95e-12,7;CL:1000612,3.95e-12,7;CL:0002545,1.70e-11,2;CL:0002262,2.71e-11,2;CL:1000398,2.71e-11,2;CL:0002681,4.24e-07,12;CL:0002584,4.24e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;5.23e-90;18!CL:0005022;2.10e-29;6!CL:0000222;1.90e-13;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.70e-36!18;UBERON:0004638!5.70e-36!18;UBERON:0004852!5.70e-36!18;UBERON:0000487!2.55e-28!22;UBERON:0006914!8.27e-27!25;UBERON:0007023!7.18e-22!115;UBERON:0003915!7.51e-19!9;UBERON:0004700!7.51e-19!9;UBERON:0001917!7.51e-19!9;UBERON:0004111!1.66e-17!241;UBERON:0000055!2.86e-16!69;UBERON:0000477!3.84e-16!286;UBERON:0000025!4.08e-15!194;UBERON:0002049!3.92e-13!79;UBERON:0007798!3.92e-13!79;UBERON:0000483!2.50e-12!309;UBERON:0000119!4.88e-12!312;UBERON:0001981!3.55e-11!60;UBERON:0007500!3.55e-11!60;UBERON:0004537!3.55e-11!60;UBERON:0006965!3.55e-11!60;UBERON:0001638!8.51e-11!9;UBERON:0003920!8.51e-11!9;UBERON:0004582!8.51e-11!9;UBERON:0004872!1.65e-09!84;UBERON:0001049!3.45e-09!57;UBERON:0005068!3.45e-09!57;UBERON:0006241!3.45e-09!57;UBERON:0007135!3.45e-09!57;UBERON:0001473!4.36e-09!8;UBERON:0004536!4.36e-09!8;UBERON:0006558!4.36e-09!8;UBERON:0000468!3.32e-08!659;UBERON:0004535!6.76e-08!110;UBERON:0000467!7.36e-08!625;UBERON:0000480!8.30e-08!626;UBERON:0003076!9.58e-08!15;UBERON:0003057!9.58e-08!15;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0001009!1.73e-07!113;UBERON:0003914!2.14e-07!118;UBERON:0001915!2.26e-07!3;UBERON:0001982!2.26e-07!3;UBERON:0005743!2.35e-07!86;UBERON:0001017!2.68e-07!82;UBERON:0002298!3.19e-07!8;UBERON:0002465!4.54e-07!10;UBERON:0002346!5.61e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.23e-90;18!UBERON:0001986;5.23e-90;18!UBERON:0004852;5.23e-90;18!UBERON:0000487;6.78e-73;22!UBERON:0006914;1.19e-63;25!UBERON:0003915;8.25e-46;9!UBERON:0004700;8.25e-46;9!UBERON:0001917;8.25e-46;9!UBERON:0000490;2.47e-43;33!UBERON:0000055;1.84e-26;65!UBERON:0001473;6.23e-22;8!UBERON:0004536;6.23e-22;8!UBERON:0006558;6.23e-22;8!UBERON:0001638;2.35e-20;9!UBERON:0003920;2.35e-20;9!UBERON:0004582;2.35e-20;9!UBERON:0007500;3.44e-20;56!UBERON:0001981;3.44e-20;56!UBERON:0004537;3.44e-20;56!UBERON:0002465;1.93e-17;10!UBERON:0002049;4.16e-17;75!UBERON:0007798;4.16e-17;75!UBERON:0010523;2.32e-16;3!UBERON:0001915;2.32e-16;3!UBERON:0001982;2.32e-16;3!UBERON:0003914;3.19e-16;74!UBERON:0000074;3.95e-12;7!UBERON:0001229;3.95e-12;7!UBERON:0000025;6.34e-12;93!UBERON:0000353;6.40e-12;15!UBERON:0005800;1.75e-11;2!UBERON:0001515;1.75e-11;2!UBERON:0001281;2.64e-11;2!UBERON:0003497;2.64e-11;2!UBERON:0003909;2.64e-11;2!UBERON:0003835;2.64e-11;2!UBERON:0004535;5.39e-10;109!UBERON:0002066;7.16e-10;5!UBERON:0001009;8.16e-10;112!UBERON:0004111;2.33e-09;130!UBERON:0001637;1.59e-08;42!UBERON:0003509;1.59e-08;42!UBERON:0004572;1.59e-08;42!UBERON:0000947;2.04e-08;21!UBERON:0010191;2.04e-08;21!UBERON:0002405;4.23e-08;27!UBERON:0001280;8.20e-08;3!UBERON:0004647;8.20e-08;3!UBERON:0001225;4.24e-07;12!UBERON:0008987;4.24e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.84e-90,18;UBERON:0001986,4.84e-90,18;UBERON:0004852,4.84e-90,18;UBERON:0000487,6.36e-73,22;UBERON:0006914,1.12e-63,25;UBERON:0003915,7.84e-46,9;UBERON:0004700,7.84e-46,9;UBERON:0001917,7.84e-46,9;UBERON:0000055,1.55e-45,68;UBERON:0002049,5.92e-39,78;UBERON:0007798,5.92e-39,78;UBERON:0007500,8.81e-31,59;UBERON:0001981,8.81e-31,59;UBERON:0004537,8.81e-31,59;UBERON:0006965,8.81e-31,59;UBERON:0004535,3.20e-26,109;UBERON:0001009,2.31e-25,112;UBERON:0004872,9.20e-23,83;UBERON:0001473,6.35e-22,8;UBERON:0004536,6.35e-22,8;UBERON:0006558,6.35e-22,8;UBERON:0001638,2.43e-20,9;UBERON:0003920,2.43e-20,9;UBERON:0004582,2.43e-20,9;UBERON:0003914,3.10e-20,117;UBERON:0002465,1.95e-17,10;UBERON:0004111,2.05e-16,240;UBERON:0010523,2.15e-16,3;UBERON:0001915,2.15e-16,3;UBERON:0001982,2.15e-16,3;UBERON:0010532,3.95e-12,7;UBERON:0000074,3.95e-12,7;UBERON:0001229,3.95e-12,7;UBERON:0001230,3.95e-12,7;UBERON:0003220,3.95e-12,7;UBERON:0005749,3.95e-12,7;UBERON:0004199,3.95e-12,7;UBERON:0004209,3.95e-12,7;UBERON:0004198,3.95e-12,7;UBERON:0000490,6.23e-12,148;UBERON:0000353,6.46e-12,15;UBERON:0005800,1.70e-11,2;UBERON:0001515,1.70e-11,2;UBERON:0001281,2.71e-11,2;UBERON:0003497,2.71e-11,2;UBERON:0003909,2.71e-11,2;UBERON:0003835,2.71e-11,2;UBERON:0000025,3.20e-11,192;UBERON:0005103,1.26e-10,8;UBERON:0000083,1.26e-10,8;UBERON:0009201,1.26e-10,8;UBERON:0006553,1.26e-10,8;UBERON:0003074,1.26e-10,8;UBERON:0003060,1.26e-10,8;UBERON:0003887,1.84e-10,12;UBERON:0003081,2.61e-10,203;UBERON:0002066,7.38e-10,5;UBERON:0000080,1.88e-09,9;UBERON:0002120,1.88e-09,9;UBERON:0004875,1.88e-09,9;UBERON:0005721,1.88e-09,9;UBERON:0005754,1.88e-09,9;UBERON:0007297,1.88e-09,9;UBERON:0000058,2.81e-09,19;UBERON:0001637,1.42e-08,42;UBERON:0003509,1.42e-08,42;UBERON:0004572,1.42e-08,42;UBERON:0000947,1.99e-08,21;UBERON:0010191,1.99e-08,21;UBERON:0001280,8.34e-08,3;UBERON:0004647,8.34e-08,3;UBERON:0005171,8.34e-08,3;UBERON:0004876,9.65e-08,11;UBERON:0001225,4.24e-07,12;UBERON:0008987,4.24e-07,12 | |||
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|short_description=p@chr16:2220383..2220402,+ | |short_description=p@chr16:2220383..2220402,+ | ||
}} | }} |
Latest revision as of 07:09, 25 July 2015
Short description: | p@chr16:2220383..2220402, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2220383..2220402, + |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.29e-123 | 36 |
endothelial cell of vascular tree | 1.74e-118 | 24 |
meso-epithelial cell | 5.39e-97 | 45 |
blood vessel endothelial cell | 4.84e-90 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.84e-90 | 18 |
lining cell | 7.67e-74 | 58 |
barrier cell | 7.67e-74 | 58 |
endothelial cell of artery | 7.84e-46 | 9 |
mesodermal cell | 4.58e-32 | 121 |
aortic endothelial cell | 5.27e-31 | 6 |
vein endothelial cell | 8.81e-31 | 6 |
lymphangioblast | 2.15e-29 | 6 |
endothelial cell of lymphatic vessel | 2.15e-29 | 6 |
vascular lymphangioblast | 2.15e-29 | 6 |
squamous epithelial cell | 9.24e-23 | 63 |
glomerular endothelial cell | 6.21e-17 | 5 |
capillary endothelial cell | 2.15e-16 | 3 |
endothelial cell of umbilical vein | 4.19e-16 | 3 |
embryonic cell | 4.20e-13 | 250 |
epithelial cell | 5.02e-13 | 253 |
glomerular cell | 3.95e-12 | 7 |
kidney corpuscule cell | 3.95e-12 | 7 |
thoracic aorta endothelial cell | 1.70e-11 | 2 |
endothelial cell of sinusoid | 2.71e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.71e-11 | 2 |
kidney cortical cell | 4.24e-07 | 12 |
renal cortical epithelial cell | 4.24e-07 | 12 |