FFCP PHASE1:Hg19::chr17:77997890..77997901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:77997890..77997901,+ | |||
|coexpression_cluster_id=C1164 | |coexpression_cluster_id=C1164 | ||
|description=CAGE_peak_at_chr17:77997890..77997901,+ | |description=CAGE_peak_at_chr17:77997890..77997901,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;6.96e-21;2 | |ontology_enrichment_celltype_v019=CL:0000047;6.96e-21;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.87e-53;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.87e-53;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr17:77997890..77997901,+ | |short_description=p@chr17:77997890..77997901,+ | ||
}} | }} |
Latest revision as of 22:27, 25 July 2015
Short description: | p@chr17:77997890..77997901, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:77997890..77997901, + |
Coexpression cluster: | C1164_pineal_cerebellum_neuroblastoma_insula_rectum_frontal_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
cerebellum | 2.72e-27 | 6 |
rhombic lip | 2.72e-27 | 6 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
regional part of metencephalon | 1.35e-18 | 9 |
metencephalon | 1.35e-18 | 9 |
future metencephalon | 1.35e-18 | 9 |
segmental subdivision of hindbrain | 3.14e-14 | 12 |
hindbrain | 3.14e-14 | 12 |
presumptive hindbrain | 3.14e-14 | 12 |
segmental subdivision of nervous system | 3.22e-13 | 13 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 1.93e-12 | 53 |
regional part of brain | 1.93e-12 | 53 |
neural tube | 7.99e-12 | 56 |
neural rod | 7.99e-12 | 56 |
future spinal cord | 7.99e-12 | 56 |
neural keel | 7.99e-12 | 56 |
posterior neural tube | 1.34e-11 | 15 |
chordal neural plate | 1.34e-11 | 15 |
nervous system | 2.13e-11 | 89 |
brain | 9.44e-10 | 68 |
future brain | 9.44e-10 | 68 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
neurectoderm | 5.76e-08 | 86 |