FFCP PHASE1:Hg19::chr18:55922702..55922728,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:55922702..55922728,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_at_chr18:55922702..55922728,+ | |description=CAGE_peak_at_chr18:55922702..55922728,+ | ||
|id=chr18:55922702..55922728,+ | |id=chr18:55922702..55922728,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.90e-18!9;CL:0000515!4.22e-12!4 | |ontology_enrichment_celltype=CL:0000188!1.90e-18!9;CL:0000515!4.22e-12!4 | ||
|ontology_enrichment_celltype_v019=CL:0000056;2.50e-17;4!CL:0000188;3.20e-13;9!CL:0000515;8.68e-11;3!CL:0000680;3.89e-10;7!CL:0000228;6.16e-09;1!CL:0002372;6.16e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.17e-17,4;CL:0000188,3.70e-13,9;CL:0000228,6.16e-09,1;CL:0002372,6.16e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000515;2.50e-17;4!UBERON:0004140;3.31e-09;1!UBERON:0010226;3.87e-09;1!UBERON:0010227;1.01e-08;1!UBERON:0004874;1.71e-08;1!UBERON:0005062;4.31e-08;4!UBERON:0007284;4.31e-08;4 | |||
|ontology_enrichment_disease=DOID:114!3.65e-07!2 | |ontology_enrichment_disease=DOID:114!3.65e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:114;2.35e-16;2!DOID:178;6.16e-09;1!DOID:326;6.16e-09;1!DOID:3978;6.16e-09;1!DOID:3394;6.16e-09;1!DOID:5844;6.16e-09;1!DOID:1287;1.27e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.17e-16,2;DOID:178,5.28e-09,1;DOID:326,5.28e-09,1;DOID:3978,5.28e-09,1;DOID:3394,5.28e-09,1;DOID:5844,5.28e-09,1;DOID:1287,1.22e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.14e-23!115;UBERON:0007100!1.44e-10!27;UBERON:0000481!2.02e-10!347;UBERON:0003103!1.92e-08!69;UBERON:0001950!3.00e-08!20;UBERON:0000483!1.02e-07!309;UBERON:0008814!1.52e-07!15;UBERON:0000119!1.53e-07!312;UBERON:0002619!2.17e-07!22;UBERON:0001630!4.73e-07!2;UBERON:0005090!4.73e-07!2;UBERON:0000341!6.12e-07!2;UBERON:0001134!7.75e-07!61;UBERON:0002036!7.75e-07!61;UBERON:0003082!7.75e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!5.14e-23!115;UBERON:0007100!1.44e-10!27;UBERON:0000481!2.02e-10!347;UBERON:0003103!1.92e-08!69;UBERON:0001950!3.00e-08!20;UBERON:0000483!1.02e-07!309;UBERON:0008814!1.52e-07!15;UBERON:0000119!1.53e-07!312;UBERON:0002619!2.17e-07!22;UBERON:0001630!4.73e-07!2;UBERON:0005090!4.73e-07!2;UBERON:0000341!6.12e-07!2;UBERON:0001134!7.75e-07!61;UBERON:0002036!7.75e-07!61;UBERON:0003082!7.75e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.19e-44;16!UBERON:0002036;1.19e-44;16!UBERON:0002385;9.06e-22;31!UBERON:0001015;9.06e-22;31!UBERON:0000383;9.06e-22;31!UBERON:0007100;3.93e-18;25!UBERON:0005090;5.21e-16;2!UBERON:0001630;5.21e-16;2!UBERON:0000341;9.87e-16;2!UBERON:0001723;4.43e-11;3!UBERON:0001033;4.43e-11;3!UBERON:0004151;4.54e-11;3!UBERON:0003978;1.68e-10;3!UBERON:0000946;1.68e-10;3!UBERON:0001389;3.06e-09;1!UBERON:0000026;3.06e-09;1!UBERON:0008784;3.06e-09;1!UBERON:0006058;3.06e-09;1!UBERON:0003663;3.06e-09;1!UBERON:0004256;3.06e-09;1!UBERON:0004708;3.06e-09;1!UBERON:0002101;3.06e-09;1!UBERON:0004709;3.06e-09;1!UBERON:0002529;3.06e-09;1!UBERON:0010538;3.06e-09;1!UBERON:0003661;3.06e-09;1!UBERON:0010890;3.06e-09;1!UBERON:0002471;3.06e-09;1!UBERON:0001383;3.06e-09;1!UBERON:0010758;3.06e-09;1!UBERON:0010707;3.06e-09;1!UBERON:0000978;3.06e-09;1!UBERON:0002103;3.06e-09;1!UBERON:0001665;3.06e-09;1!UBERON:0003823;3.06e-09;1!UBERON:0000154;3.06e-09;1!UBERON:0010709;3.06e-09;1!UBERON:0002084;3.87e-09;1!UBERON:0002082;3.87e-09;1!UBERON:0002079;1.01e-08;1!UBERON:0000989;1.71e-08;1!UBERON:0002135;1.71e-08;1!UBERON:0002146;1.71e-08;1!UBERON:0008811;1.71e-08;1!UBERON:0002426;1.71e-08;1!UBERON:0003831;1.71e-08;1!UBERON:0003898;1.71e-08;1!UBERON:0004830;1.71e-08;1!UBERON:0005623;1.71e-08;1!UBERON:0003830;1.71e-08;1!UBERON:0005175;1.71e-08;1!UBERON:0001774;1.71e-08;1!UBERON:0001103;1.71e-08;1!UBERON:0000948;2.58e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.07e-16,27;UBERON:0005090,4.31e-16,2;UBERON:0001630,4.31e-16,2;UBERON:0000341,8.50e-16,2;UBERON:0004151,4.21e-11,3;UBERON:0001723,4.43e-11,3;UBERON:0001033,4.43e-11,3;UBERON:0010056,4.43e-11,3;UBERON:0003978,1.86e-10,3;UBERON:0009751,1.86e-10,3;UBERON:0000946,1.86e-10,3;UBERON:0002523,1.86e-10,3;UBERON:0005983,1.86e-10,3;UBERON:0002165,1.86e-10,3;UBERON:0002062,1.86e-10,3;UBERON:0007280,1.86e-10,3;UBERON:0001134,2.44e-10,62;UBERON:0002036,2.44e-10,62;UBERON:0003082,2.44e-10,62;UBERON:0002385,5.77e-10,64;UBERON:0001015,5.77e-10,64;UBERON:0000383,5.77e-10,64;UBERON:0003103,2.16e-09,68;UBERON:0005418,3.06e-09,1;UBERON:0001389,3.06e-09,1;UBERON:0000026,3.06e-09,1;UBERON:0008784,3.06e-09,1;UBERON:0006058,3.06e-09,1;UBERON:0003663,3.06e-09,1;UBERON:0004256,3.06e-09,1;UBERON:0004708,3.06e-09,1;UBERON:0002101,3.06e-09,1;UBERON:0004709,3.06e-09,1;UBERON:0002529,3.06e-09,1;UBERON:0010538,3.06e-09,1;UBERON:0003661,3.06e-09,1;UBERON:0010890,3.06e-09,1;UBERON:0002471,3.06e-09,1;UBERON:0001383,3.06e-09,1;UBERON:0004357,3.06e-09,1;UBERON:0004347,3.06e-09,1;UBERON:0005420,3.06e-09,1;UBERON:0005732,3.06e-09,1;UBERON:0010758,3.06e-09,1;UBERON:0010707,3.06e-09,1;UBERON:0000978,3.06e-09,1;UBERON:0002103,3.06e-09,1;UBERON:0001665,3.06e-09,1;UBERON:0003823,3.06e-09,1;UBERON:0000154,3.06e-09,1;UBERON:0010709,3.06e-09,1;UBERON:0005733,3.06e-09,1;UBERON:0005730,3.06e-09,1;UBERON:0002084,3.87e-09,1;UBERON:0002082,3.87e-09,1;UBERON:0010226,3.87e-09,1;UBERON:0002329,8.02e-09,71;UBERON:0003059,8.02e-09,71;UBERON:0007282,8.02e-09,71;UBERON:0004290,8.02e-09,71;UBERON:0009618,8.02e-09,71;UBERON:0002079,9.02e-09,1;UBERON:0003077,1.12e-08,72;UBERON:0007285,1.12e-08,72;UBERON:0002426,1.42e-08,1;UBERON:0003831,1.42e-08,1;UBERON:0003898,1.42e-08,1;UBERON:0004830,1.42e-08,1;UBERON:0003830,1.42e-08,1;UBERON:0005175,1.42e-08,1;UBERON:0001774,1.42e-08,1;UBERON:0001103,1.42e-08,1;UBERON:0010084,1.42e-08,1;UBERON:0000989,1.53e-08,1;UBERON:0008811,1.53e-08,1;UBERON:0006258,1.53e-08,1;UBERON:0005876,1.53e-08,1;UBERON:0004874,1.53e-08,1;UBERON:0007524,1.55e-08,73;UBERON:0002135,1.65e-08,1;UBERON:0002146,2.06e-08,1;UBERON:0005623,2.06e-08,1;UBERON:0007503,6.93e-08,78;UBERON:0000948,1.34e-07,24;UBERON:0005498,1.34e-07,24;UBERON:0004140,1.34e-07,24;UBERON:0009881,1.34e-07,24;UBERON:0004141,1.34e-07,24;UBERON:0003084,1.34e-07,24;UBERON:0007005,1.34e-07,24;UBERON:0004139,1.34e-07,24;UBERON:0004291,1.34e-07,24;UBERON:0000486,2.59e-07,83;UBERON:0007023,2.70e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,1.73737568001095,0.61642896765115,4.1184021545176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16004861950546,0.154048617114644,0.307007349452259,1.24052915236078,0,0.145016693914229,0.596586391912706,2.04773681987496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.14580212005842,0,4.99197501247478,12.4475553959606,4.01708623395371,13.3023275523718,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0.419636705079985,0,0,0,2.85878130549347,12.5797474369432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0.781078098613847,0,0.19024743058172,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,2.26015753993353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.0188706965826,8.5210129690685,12.7579587447202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,2.98527574661373,2.14257988317366,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.404234377916439,3.04803447055746,5.13349951627922,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,1.73737568001095,0.61642896765115,4.1184021545176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16004861950546,0.154048617114644,0.307007349452259,1.24052915236078,0,0.145016693914229,0.596586391912706,2.04773681987496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.14580212005842,0,4.99197501247478,12.4475553959606,4.01708623395371,13.3023275523718,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0.419636705079985,0,0,0,2.85878130549347,12.5797474369432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80033317595784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.135075169236789,0.781078098613847,0,0.19024743058172,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0.339848664884159,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,2.26015753993353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.0188706965826,8.5210129690685,12.7579587447202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,2.98527574661373,2.14257988317366,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.404234377916439,3.04803447055746,5.13349951627922,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr18:55922702..55922728,+ | |short_description=p@chr18:55922702..55922728,+ | ||
}} | }} |
Latest revision as of 01:33, 26 July 2015
Short description: | p@chr18:55922702..55922728, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:55922702..55922728, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.17e-17 | 4 |
cell of skeletal muscle | 3.70e-13 | 9 |
multinucleate cell | 6.16e-09 | 1 |
myotube | 6.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.17e-16 | 2 |
vascular disease | 5.28e-09 | 1 |