FFCP PHASE1:Hg19::chr1:161188661..161188679,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:161188661..161188679,+
|short_description=p@chr1:161188661..161188679,+
|description=CAGE_peak_at_chr1:161188661..161188679,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:161188661..161188679,+ | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr1:161188661..161188679,+ | |||
|id=chr1:161188661..161188679,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.77e-87!76;CL:0000557!1.69e-82!71;CL:0000839!1.35e-78!70;CL:0002009!1.66e-77!65;CL:0000763!4.08e-75!112;CL:0000049!4.08e-75!112;CL:0002194!4.40e-75!63;CL:0000576!4.40e-75!63;CL:0000040!4.40e-75!63;CL:0000559!4.40e-75!63;CL:0002057!1.20e-62!42;CL:0000860!2.15e-57!45;CL:0000738!1.10e-53!140;CL:0000037!8.19e-52!172;CL:0000566!8.19e-52!172;CL:0002032!3.85e-49!165;CL:0000837!3.85e-49!165;CL:0000988!2.01e-47!182;CL:0002031!7.56e-45!124;CL:0002087!2.80e-41!119;CL:0002393!9.46e-14!9;CL:0002397!9.46e-14!9;CL:0000134!6.91e-13!358;CL:0002320!3.60e-12!365;CL:0000219!1.08e-09!390;CL:0000840!1.14e-08!5;CL:0001029!1.14e-08!5;CL:0000048!5.34e-08!430;CL:0000723!1.41e-07!436;CL:0002274!2.09e-07!5;CL:0000457!2.09e-07!5;CL:0002191!2.09e-07!5;CL:0000097!2.09e-07!5;CL:0000831!2.09e-07!5;CL:0002028!2.09e-07!5;CL:0000451!3.17e-07!10;CL:0000990!4.75e-07!8;CL:0000034!4.87e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.87e-94;39!CL:0000234;4.87e-94;39!CL:0000860;2.05e-93;33!CL:0002057;2.05e-93;33!CL:0000576;6.54e-79;48!CL:0000766;7.10e-65;69!CL:0000763;3.99e-28;100!CL:0000235;1.48e-20;6!CL:0000738;1.56e-19;136!CL:0002087;2.23e-18;104!CL:0002393;3.54e-13;6!CL:0002397;3.54e-13;6!CL:0000875;1.28e-10;3!CL:0002396;1.28e-10;3!CL:0000988;2.02e-10;177!CL:0002619;3.11e-10;3!CL:0000775;9.28e-10;3!CL:0000219;9.53e-09;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.43e-144,48;CL:0000234,1.43e-144,48;CL:0000766,8.11e-141,72;CL:0002194,1.31e-139,59;CL:0000576,1.31e-139,59;CL:0000040,1.31e-139,59;CL:0000559,1.31e-139,59;CL:0002009,1.01e-134,61;CL:0000839,1.43e-133,66;CL:0000557,1.98e-131,67;CL:0000860,2.27e-124,42;CL:0002057,2.27e-124,42;CL:0000763,3.13e-90,108;CL:0000049,3.13e-90,108;CL:0000738,6.19e-72,136;CL:0002087,3.07e-69,115;CL:0002031,1.55e-68,120;CL:0002032,1.23e-56,161;CL:0000837,1.23e-56,161;CL:0000037,6.07e-56,168;CL:0000988,1.77e-52,177;CL:0002393,6.86e-22,9;CL:0002397,6.86e-22,9;CL:0000235,1.67e-20,6;CL:0000134,5.58e-20,354;CL:0002320,2.41e-19,361;CL:0000219,4.14e-17,386;CL:0000048,3.30e-15,427;CL:0000723,8.10e-15,433;CL:0000034,2.58e-14,441;CL:0000875,1.43e-10,3;CL:0002396,1.43e-10,3;CL:0002619,3.54e-10,3;CL:0000775,8.86e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.01e-89;42!CL:0000049;5.44e-27;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-78!102;UBERON:0003061!1.81e-78!102;UBERON:0002193!3.53e-73!112;UBERON:0002371!5.56e-73!80;UBERON:0001474!2.49e-66!86;UBERON:0002405!6.37e-57!115;UBERON:0004765!3.64e-53!101;UBERON:0001434!3.64e-53!101;UBERON:0003081!2.73e-29!216;UBERON:0002204!1.80e-27!167;UBERON:0002384!1.06e-11!375;UBERON:0000926!8.88e-09!448;UBERON:0004120!8.88e-09!448;UBERON:0006603!8.88e-09!448;UBERON:0007023!1.28e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-114,76;UBERON:0001474,1.73e-105,82;UBERON:0002405,2.36e-95,93;UBERON:0004765,3.80e-95,90;UBERON:0002390,2.12e-93,98;UBERON:0003061,2.12e-93,98;UBERON:0002193,5.96e-87,108;UBERON:0001434,1.60e-84,100;UBERON:0002204,6.70e-48,167;UBERON:0003081,1.25e-40,203;UBERON:0000926,9.09e-22,315;UBERON:0004120,9.09e-22,315;UBERON:0006603,9.09e-22,315;UBERON:0002384,1.76e-18,371;UBERON:0000923,4.11e-07,560;UBERON:0010316,4.11e-07,560;UBERON:0005291,4.11e-07,560;UBERON:0006598,4.11e-07,560;UBERON:0010317,4.11e-07,560;UBERON:0002532,4.11e-07,560;UBERON:0002050,5.69e-07,564 | |||
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|short_description=p@chr1:161188661..161188679,+ | |||
}} | }} |
Latest revision as of 23:34, 27 July 2015
Short description: | p@chr1:161188661..161188679, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:161188661..161188679, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-114 | 76 |
bone element | 1.73e-105 | 82 |
immune system | 2.36e-95 | 93 |
skeletal element | 3.80e-95 | 90 |
hematopoietic system | 2.12e-93 | 98 |
blood island | 2.12e-93 | 98 |
hemolymphoid system | 5.96e-87 | 108 |
skeletal system | 1.60e-84 | 100 |
musculoskeletal system | 6.70e-48 | 167 |
lateral plate mesoderm | 1.25e-40 | 203 |
mesoderm | 9.09e-22 | 315 |
mesoderm-derived structure | 9.09e-22 | 315 |
presumptive mesoderm | 9.09e-22 | 315 |
connective tissue | 1.76e-18 | 371 |
germ layer | 4.11e-07 | 560 |
germ layer / neural crest | 4.11e-07 | 560 |
embryonic tissue | 4.11e-07 | 560 |
presumptive structure | 4.11e-07 | 560 |
germ layer / neural crest derived structure | 4.11e-07 | 560 |
epiblast (generic) | 4.11e-07 | 560 |
embryonic structure | 5.69e-07 | 564 |