FFCP PHASE1:Hg19::chr1:245025039..245025045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:245025039..245025045,- | |||
|coexpression_cluster_id=C1591 | |||
|description=CAGE_peak_at_chr1:245025039..245025045,- | |description=CAGE_peak_at_chr1:245025039..245025045,- | ||
|id=chr1:245025039..245025045,- | |id=chr1:245025039..245025045,- | ||
|ontology_enrichment_celltype=CL:0000037!6.79e-31!172;CL:0000566!6.79e-31!172;CL:0000738!4.55e-29!140;CL:0002032!3.52e-28!165;CL:0000837!3.52e-28!165;CL:0000988!7.52e-28!182;CL:0002031!1.02e-25!124;CL:0002087!4.41e-25!119;CL:0000763!5.15e-17!112;CL:0000049!5.15e-17!112;CL:0000766!5.72e-16!76;CL:0000839!2.55e-15!70;CL:0000557!3.83e-14!71;CL:0002009!1.76e-13!65;CL:0000860!2.15e-13!45;CL:0002194!2.62e-13!63;CL:0000576!2.62e-13!63;CL:0000040!2.62e-13!63;CL:0000559!2.62e-13!63;CL:0002057!2.25e-12!42;CL:0000542!1.19e-10!53;CL:0000051!1.19e-10!53;CL:0000838!2.48e-10!52 | |ontology_enrichment_celltype=CL:0000037!6.79e-31!172;CL:0000566!6.79e-31!172;CL:0000738!4.55e-29!140;CL:0002032!3.52e-28!165;CL:0000837!3.52e-28!165;CL:0000988!7.52e-28!182;CL:0002031!1.02e-25!124;CL:0002087!4.41e-25!119;CL:0000763!5.15e-17!112;CL:0000049!5.15e-17!112;CL:0000766!5.72e-16!76;CL:0000839!2.55e-15!70;CL:0000557!3.83e-14!71;CL:0002009!1.76e-13!65;CL:0000860!2.15e-13!45;CL:0002194!2.62e-13!63;CL:0000576!2.62e-13!63;CL:0000040!2.62e-13!63;CL:0000559!2.62e-13!63;CL:0002057!2.25e-12!42;CL:0000542!1.19e-10!53;CL:0000051!1.19e-10!53;CL:0000838!2.48e-10!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.01e-08;33!CL:0002057;2.01e-08;33!CL:0000542;1.12e-07;53!CL:0000576;3.52e-07;48!CL:0000766;6.27e-07;69!CL:0002087;8.07e-07;104!CL:0000473;9.97e-07;39!CL:0000234;9.97e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.38e-30,168;CL:0000988,1.36e-29,177;CL:0000738,5.76e-28,136;CL:0002032,1.00e-26,161;CL:0000837,1.00e-26,161;CL:0002087,4.09e-23,115;CL:0002031,4.55e-23,120;CL:0000763,1.09e-15,108;CL:0000049,1.09e-15,108;CL:0000766,7.97e-15,72;CL:0000839,3.90e-13,66;CL:0000860,1.03e-12,42;CL:0002057,1.03e-12,42;CL:0000557,7.18e-12,67;CL:0000473,1.95e-11,48;CL:0000234,1.95e-11,48;CL:0002194,3.82e-11,59;CL:0000576,3.82e-11,59;CL:0000040,3.82e-11,59;CL:0000559,3.82e-11,59;CL:0002009,4.41e-11,61;CL:0000542,1.04e-10,53;CL:0000051,1.04e-10,53;CL:0000838,2.67e-10,52 | |||
|ontology_enrichment_development_v019=CL:0002057;4.26e-09;42!CL:0000051;1.12e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-12!102;UBERON:0003061!1.26e-12!102;UBERON:0002193!1.97e-10!112;UBERON:0001474!2.35e-10!86;UBERON:0002371!2.56e-10!80;UBERON:0002780!4.90e-10!41;UBERON:0001890!4.90e-10!41;UBERON:0006240!4.90e-10!41;UBERON:0001049!9.89e-10!57;UBERON:0005068!9.89e-10!57;UBERON:0006241!9.89e-10!57;UBERON:0007135!9.89e-10!57;UBERON:0007023!2.02e-09!115;UBERON:0003080!2.63e-09!42;UBERON:0002020!1.20e-08!34;UBERON:0003528!1.20e-08!34;UBERON:0001893!2.93e-08!34;UBERON:0002791!3.51e-08!33;UBERON:0001017!5.88e-08!82;UBERON:0002616!6.11e-08!59;UBERON:0002405!6.55e-08!115;UBERON:0000073!1.21e-07!94;UBERON:0001016!1.21e-07!94;UBERON:0000955!1.51e-07!69;UBERON:0006238!1.51e-07!69;UBERON:0001869!1.59e-07!32;UBERON:0004765!3.30e-07!101;UBERON:0001434!3.30e-07!101;UBERON:0005743!4.31e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.60e-07;41!UBERON:0001890;2.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.57e-12,98;UBERON:0003061,6.57e-12,98;UBERON:0001049,3.40e-10,56;UBERON:0005068,3.40e-10,56;UBERON:0006241,3.40e-10,56;UBERON:0007135,3.40e-10,56;UBERON:0002371,2.49e-09,76;UBERON:0002193,3.37e-09,108;UBERON:0000073,3.94e-09,53;UBERON:0002616,3.94e-09,53;UBERON:0002346,4.05e-09,86;UBERON:0001474,8.04e-09,82;UBERON:0002780,1.03e-08,41;UBERON:0001890,1.03e-08,41;UBERON:0003080,1.03e-08,41;UBERON:0006240,1.03e-08,41;UBERON:0003075,1.48e-07,82;UBERON:0007284,1.48e-07,82;UBERON:0003528,2.68e-07,34;UBERON:0002020,2.68e-07,34;UBERON:0007023,5.51e-07,114;UBERON:0001893,6.96e-07,34;UBERON:0004765,7.08e-07,90;UBERON:0000955,7.74e-07,68;UBERON:0006238,7.74e-07,68;UBERON:0001016,8.16e-07,89;UBERON:0002405,9.48e-07,93 | |||
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| ||
|short_description=p@chr1:245025039..245025045,- | |short_description=p@chr1:245025039..245025045,- | ||
}} | }} |
Latest revision as of 05:59, 28 July 2015
Short description: | p@chr1:245025039..245025045, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:245025039..245025045, - |
Coexpression cluster: | C1591_CD4_CD19_CD8_Natural_Neutrophils_peripheral_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.38e-30 | 168 |
hematopoietic cell | 1.36e-29 | 177 |
leukocyte | 5.76e-28 | 136 |
hematopoietic oligopotent progenitor cell | 1.00e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-26 | 161 |
nongranular leukocyte | 4.09e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 4.55e-23 | 120 |
myeloid cell | 1.09e-15 | 108 |
common myeloid progenitor | 1.09e-15 | 108 |
myeloid leukocyte | 7.97e-15 | 72 |
myeloid lineage restricted progenitor cell | 3.90e-13 | 66 |
classical monocyte | 1.03e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-12 | 42 |
granulocyte monocyte progenitor cell | 7.18e-12 | 67 |
defensive cell | 1.95e-11 | 48 |
phagocyte | 1.95e-11 | 48 |
monopoietic cell | 3.82e-11 | 59 |
monocyte | 3.82e-11 | 59 |
monoblast | 3.82e-11 | 59 |
promonocyte | 3.82e-11 | 59 |
macrophage dendritic cell progenitor | 4.41e-11 | 61 |
lymphocyte | 1.04e-10 | 53 |
common lymphoid progenitor | 1.04e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.67e-10 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.57e-12 | 98 |
blood island | 6.57e-12 | 98 |
neural tube | 3.40e-10 | 56 |
neural rod | 3.40e-10 | 56 |
future spinal cord | 3.40e-10 | 56 |
neural keel | 3.40e-10 | 56 |
bone marrow | 2.49e-09 | 76 |
hemolymphoid system | 3.37e-09 | 108 |
regional part of nervous system | 3.94e-09 | 53 |
regional part of brain | 3.94e-09 | 53 |
neurectoderm | 4.05e-09 | 86 |
bone element | 8.04e-09 | 82 |
regional part of forebrain | 1.03e-08 | 41 |
forebrain | 1.03e-08 | 41 |
anterior neural tube | 1.03e-08 | 41 |
future forebrain | 1.03e-08 | 41 |
neural plate | 1.48e-07 | 82 |
presumptive neural plate | 1.48e-07 | 82 |
brain grey matter | 2.68e-07 | 34 |
gray matter | 2.68e-07 | 34 |
adult organism | 5.51e-07 | 114 |
telencephalon | 6.96e-07 | 34 |
skeletal element | 7.08e-07 | 90 |
brain | 7.74e-07 | 68 |
future brain | 7.74e-07 | 68 |
nervous system | 8.16e-07 | 89 |
immune system | 9.48e-07 | 93 |