FFCP PHASE1:Hg19::chr1:26607542..26607556,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:26607542..26607556,+ | |||
|coexpression_cluster_id=C853 | |||
|description=CAGE_peak_at_chr1:26607542..26607556,+ | |||
|id=chr1:26607542..26607556,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.03e-30!591;CL:0000723!1.69e-28!436;CL:0000048!9.88e-28!430;CL:0000034!3.20e-26!444;CL:0000144!3.24e-26!625;CL:0002057!1.27e-19!42;CL:0002320!1.30e-18!365;CL:0000134!2.22e-18!358;CL:0000003!4.44e-18!722;CL:0000860!2.28e-17!45;CL:0000766!7.84e-17!76;CL:0000548!4.17e-16!679;CL:0000004!4.17e-16!679;CL:0000255!4.17e-16!679;CL:0000839!8.85e-16!70;CL:0000012!2.21e-15!682;CL:0000557!3.86e-15!71;CL:0002194!9.76e-15!63;CL:0000576!9.76e-15!63;CL:0000040!9.76e-15!63;CL:0000559!9.76e-15!63;CL:0002009!2.01e-14!65;CL:0000219!2.14e-13!390;CL:0000063!2.41e-11!578;CL:0000763!3.53e-10!112;CL:0000049!3.53e-10!112;CL:0000055!9.63e-09!180;CL:0000057!4.99e-08!75;CL:0000192!7.24e-08!42;CL:0000514!7.24e-08!42;CL:0000680!1.22e-07!57;CL:0000056!1.22e-07!57;CL:0000355!1.22e-07!57;CL:0000738!1.28e-07!140;CL:0002031!1.36e-07!124;CL:0000222!3.87e-07!119;CL:0000187!5.68e-07!54;CL:0000183!7.07e-07!59;CL:0000359!9.79e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-17;33!CL:0002057;1.36e-17;33!CL:0000473;2.56e-16;39!CL:0000234;2.56e-16;39!CL:0000576;2.46e-10;48!CL:0000766;5.93e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.01e-28,433;CL:0000048,6.04e-28,427;CL:0000034,1.80e-26,441;CL:0000473,3.69e-22,48;CL:0000234,3.69e-22,48;CL:0000860,5.17e-20,42;CL:0002057,5.17e-20,42;CL:0000766,4.11e-19,72;CL:0002320,9.67e-19,361;CL:0000134,1.65e-18,354;CL:0000839,7.50e-18,66;CL:0000557,2.55e-17,67;CL:0002194,7.85e-17,59;CL:0000576,7.85e-17,59;CL:0000040,7.85e-17,59;CL:0000559,7.85e-17,59;CL:0002009,1.95e-16,61;CL:0000219,1.06e-13,386;CL:0000763,4.59e-11,108;CL:0000049,4.59e-11,108;CL:0002031,4.29e-08,120;CL:0000738,4.53e-08,136;CL:0000057,6.29e-08,76;CL:0000192,6.35e-08,43;CL:0000514,6.35e-08,43;CL:0000680,1.23e-07,58;CL:0000056,1.23e-07,58;CL:0000355,1.23e-07,58;CL:0002087,5.27e-07,115;CL:0000222,5.32e-07,121;CL:0000187,5.88e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;7.14e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.92e-21!167;UBERON:0003081!3.23e-18!216;UBERON:0002384!1.30e-17!375;UBERON:0002371!3.04e-15!80;UBERON:0004765!2.07e-14!101;UBERON:0001434!2.07e-14!101;UBERON:0001474!1.10e-12!86;UBERON:0002390!2.12e-12!102;UBERON:0003061!2.12e-12!102;UBERON:0002193!6.42e-12!112;UBERON:0000914!1.08e-09!83;UBERON:0002329!1.08e-09!83;UBERON:0003077!1.08e-09!83;UBERON:0003059!1.08e-09!83;UBERON:0007282!1.08e-09!83;UBERON:0009618!1.08e-09!83;UBERON:0007285!1.08e-09!83;UBERON:0002405!1.54e-08!115;UBERON:0000486!2.49e-08!82;UBERON:0004290!5.29e-08!70;UBERON:0001637!1.94e-07!42;UBERON:0003509!1.94e-07!42;UBERON:0004572!1.94e-07!42;UBERON:0000926!4.89e-07!448;UBERON:0004120!4.89e-07!448;UBERON:0006603!4.89e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.08e-22,167;UBERON:0003081,5.97e-20,203;UBERON:0000926,7.93e-19,315;UBERON:0004120,7.93e-19,315;UBERON:0006603,7.93e-19,315;UBERON:0002384,6.94e-18,371;UBERON:0002371,3.45e-17,76;UBERON:0001434,4.68e-16,100;UBERON:0004765,4.51e-15,90;UBERON:0001474,1.38e-14,82;UBERON:0002390,1.34e-13,98;UBERON:0003061,1.34e-13,98;UBERON:0002405,2.07e-13,93;UBERON:0002193,5.98e-13,108;UBERON:0007503,1.80e-09,78;UBERON:0000486,1.57e-08,83;UBERON:0007524,2.68e-08,73;UBERON:0002329,3.49e-08,71;UBERON:0003059,3.49e-08,71;UBERON:0007282,3.49e-08,71;UBERON:0004290,3.49e-08,71;UBERON:0009618,3.49e-08,71;UBERON:0003077,4.67e-08,72;UBERON:0007285,4.67e-08,72;UBERON:0001637,1.92e-07,42;UBERON:0003509,1.92e-07,42;UBERON:0004572,1.92e-07,42 | |||
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| |||
|short_description=p@chr1:26607542..26607556,+ | |||
}} |
Latest revision as of 06:35, 28 July 2015
Short description: | p@chr1:26607542..26607556, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26607542..26607556, + |
Coexpression cluster: | C853_Neutrophils_leiomyoma_Smooth_Monocytederived_CD14_Osteoblast_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.01e-28 | 433 |
multi fate stem cell | 6.04e-28 | 427 |
stem cell | 1.80e-26 | 441 |
defensive cell | 3.69e-22 | 48 |
phagocyte | 3.69e-22 | 48 |
classical monocyte | 5.17e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.17e-20 | 42 |
myeloid leukocyte | 4.11e-19 | 72 |
connective tissue cell | 9.67e-19 | 361 |
mesenchymal cell | 1.65e-18 | 354 |
myeloid lineage restricted progenitor cell | 7.50e-18 | 66 |
granulocyte monocyte progenitor cell | 2.55e-17 | 67 |
monopoietic cell | 7.85e-17 | 59 |
monocyte | 7.85e-17 | 59 |
monoblast | 7.85e-17 | 59 |
promonocyte | 7.85e-17 | 59 |
macrophage dendritic cell progenitor | 1.95e-16 | 61 |
motile cell | 1.06e-13 | 386 |
myeloid cell | 4.59e-11 | 108 |
common myeloid progenitor | 4.59e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 4.29e-08 | 120 |
leukocyte | 4.53e-08 | 136 |
fibroblast | 6.29e-08 | 76 |
smooth muscle cell | 6.35e-08 | 43 |
smooth muscle myoblast | 6.35e-08 | 43 |
muscle precursor cell | 1.23e-07 | 58 |
myoblast | 1.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-07 | 58 |
nongranular leukocyte | 5.27e-07 | 115 |
mesodermal cell | 5.32e-07 | 121 |
muscle cell | 5.88e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.08e-22 | 167 |
lateral plate mesoderm | 5.97e-20 | 203 |
mesoderm | 7.93e-19 | 315 |
mesoderm-derived structure | 7.93e-19 | 315 |
presumptive mesoderm | 7.93e-19 | 315 |
connective tissue | 6.94e-18 | 371 |
bone marrow | 3.45e-17 | 76 |
skeletal system | 4.68e-16 | 100 |
skeletal element | 4.51e-15 | 90 |
bone element | 1.38e-14 | 82 |
hematopoietic system | 1.34e-13 | 98 |
blood island | 1.34e-13 | 98 |
immune system | 2.07e-13 | 93 |
hemolymphoid system | 5.98e-13 | 108 |
epithelial vesicle | 1.80e-09 | 78 |
multilaminar epithelium | 1.57e-08 | 83 |
dense mesenchyme tissue | 2.68e-08 | 73 |
somite | 3.49e-08 | 71 |
presomitic mesoderm | 3.49e-08 | 71 |
presumptive segmental plate | 3.49e-08 | 71 |
dermomyotome | 3.49e-08 | 71 |
trunk paraxial mesoderm | 3.49e-08 | 71 |
paraxial mesoderm | 4.67e-08 | 72 |
presumptive paraxial mesoderm | 4.67e-08 | 72 |
artery | 1.92e-07 | 42 |
arterial blood vessel | 1.92e-07 | 42 |
arterial system | 1.92e-07 | 42 |