FFCP PHASE1:Hg19::chr21:43712634..43712683,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:43712634..43712683,+
|short_description=p@chr21:43712634..43712683,+
|description=CAGE_peak_at_chr21:43712634..43712683,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:43712634..43712683,+ | |||
|coexpression_cluster_id=C4079 | |||
|description=CAGE_peak_at_chr21:43712634..43712683,+ | |||
|id=chr21:43712634..43712683,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.23e-20!140;CL:0002087!7.83e-16!119;CL:0002031!3.51e-14!124;CL:0000037!2.43e-13!172;CL:0000566!2.43e-13!172;CL:0002057!1.22e-12!42;CL:0000860!4.00e-12!45;CL:0000988!6.10e-12!182;CL:0002032!7.80e-12!165;CL:0000837!7.80e-12!165;CL:0000542!1.85e-09!53;CL:0000051!1.85e-09!53;CL:0000766!2.30e-09!76;CL:0000838!4.27e-09!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.87e-15;33!CL:0002057;5.87e-15;33!CL:0000473;1.16e-09;39!CL:0000234;1.16e-09;39!CL:0000576;1.45e-08;48!CL:0000624;5.39e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.45e-16,136;CL:0000860,2.29e-15,42;CL:0002057,2.29e-15,42;CL:0002087,2.15e-13,115;CL:0000473,3.55e-12,48;CL:0000234,3.55e-12,48;CL:0002031,6.81e-12,120;CL:0000037,7.35e-11,168;CL:0002032,1.54e-10,161;CL:0000837,1.54e-10,161;CL:0000988,3.43e-10,177;CL:0000766,1.25e-09,72;CL:0002009,5.12e-08,61;CL:0002194,6.77e-08,59;CL:0000576,6.77e-08,59;CL:0000040,6.77e-08,59;CL:0000559,6.77e-08,59;CL:0000557,4.91e-07,67;CL:0000624,5.13e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.65e-12;42!UBERON:0006601;2.26e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.26e-29!115;UBERON:0001049!6.59e-22!57;UBERON:0005068!6.59e-22!57;UBERON:0006241!6.59e-22!57;UBERON:0007135!6.59e-22!57;UBERON:0002780!4.10e-19!41;UBERON:0001890!4.10e-19!41;UBERON:0006240!4.10e-19!41;UBERON:0003080!3.35e-18!42;UBERON:0002616!1.05e-17!59;UBERON:0000955!1.63e-16!69;UBERON:0006238!1.63e-16!69;UBERON:0001017!1.99e-15!82;UBERON:0002020!2.13e-15!34;UBERON:0003528!2.13e-15!34;UBERON:0001893!3.89e-15!34;UBERON:0005743!7.47e-15!86;UBERON:0002791!9.55e-15!33;UBERON:0003075!2.53e-14!86;UBERON:0007284!2.53e-14!86;UBERON:0002346!5.41e-14!90;UBERON:0001869!7.12e-14!32;UBERON:0000073!5.94e-13!94;UBERON:0001016!5.94e-13!94;UBERON:0002619!9.39e-13!22;UBERON:0001950!1.77e-11!20;UBERON:0003056!3.62e-11!61;UBERON:0000153!1.63e-10!129;UBERON:0007811!1.63e-10!129;UBERON:0000956!5.10e-10!25;UBERON:0000203!5.10e-10!25;UBERON:0000033!2.08e-09!123;UBERON:0002390!1.46e-07!102;UBERON:0003061!1.46e-07!102;UBERON:0002420!2.83e-07!9;UBERON:0007245!2.83e-07!9;UBERON:0010009!2.83e-07!9;UBERON:0010011!2.83e-07!9;UBERON:0000454!2.83e-07!9;UBERON:0002308!3.42e-07!9;UBERON:0000125!3.42e-07!9;UBERON:0002193!6.87e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.29e-18;41!UBERON:0001890;1.29e-18;41!UBERON:0000073;3.79e-18;53!UBERON:0002616;3.79e-18;53!UBERON:0003528;2.53e-17;34!UBERON:0002020;2.53e-17;34!UBERON:0001893;1.37e-16;34!UBERON:0002791;2.07e-16;32!UBERON:0001869;6.64e-16;32!UBERON:0002619;1.04e-14;22!UBERON:0001950;6.73e-13;20!UBERON:0000956;3.28e-12;25!UBERON:0000203;3.28e-12;25!UBERON:0000955;1.89e-10;68!UBERON:0002420;4.94e-10;9!UBERON:0007245;4.94e-10;9!UBERON:0010009;4.94e-10;9!UBERON:0010011;4.94e-10;9!UBERON:0000454;4.94e-10;9!UBERON:0000125;7.12e-10;9!UBERON:0002308;7.12e-10;9!UBERON:0001016;3.00e-09;83!UBERON:0001017;7.60e-09;75!UBERON:0009663;5.23e-08;7!UBERON:0007023;7.60e-08;114!UBERON:0001894;1.34e-07;7!UBERON:0001871;4.09e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.21e-31,56;UBERON:0005068,5.21e-31,56;UBERON:0006241,5.21e-31,56;UBERON:0007135,5.21e-31,56;UBERON:0000073,2.29e-30,53;UBERON:0002616,2.29e-30,53;UBERON:0002780,2.93e-25,41;UBERON:0001890,2.93e-25,41;UBERON:0003080,2.93e-25,41;UBERON:0006240,2.93e-25,41;UBERON:0007023,3.71e-23,114;UBERON:0000955,6.94e-23,68;UBERON:0006238,6.94e-23,68;UBERON:0003075,8.45e-21,82;UBERON:0007284,8.45e-21,82;UBERON:0002346,4.54e-20,86;UBERON:0003528,8.00e-20,34;UBERON:0002020,8.00e-20,34;UBERON:0001017,9.82e-20,81;UBERON:0001893,1.87e-19,34;UBERON:0002791,5.03e-18,32;UBERON:0001016,6.18e-18,89;UBERON:0001869,1.25e-17,32;UBERON:0003056,8.33e-16,61;UBERON:0002619,1.46e-14,22;UBERON:0010371,1.14e-13,104;UBERON:0001950,9.56e-13,20;UBERON:0000956,4.39e-12,25;UBERON:0000203,4.39e-12,25;UBERON:0002420,4.87e-10,9;UBERON:0007245,4.87e-10,9;UBERON:0010009,4.87e-10,9;UBERON:0010011,4.87e-10,9;UBERON:0000454,4.87e-10,9;UBERON:0000125,6.45e-10,9;UBERON:0002308,6.45e-10,9;UBERON:0010314,1.21e-09,132;UBERON:0009663,5.02e-08,7;UBERON:0002390,1.14e-07,98;UBERON:0003061,1.14e-07,98;UBERON:0001894,1.83e-07,7;UBERON:0006222,1.83e-07,7;UBERON:0001871,3.55e-07,6;UBERON:0003076,4.46e-07,15;UBERON:0003057,4.46e-07,15;UBERON:0004121,4.92e-07,171;UBERON:0000924,4.92e-07,171;UBERON:0006601,4.92e-07,171 | |||
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| ||
|short_description=p@chr21:43712634..43712683,+ | |||
}} | }} |
Latest revision as of 18:08, 28 July 2015
Short description: | p@chr21:43712634..43712683, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:43712634..43712683, + |
Coexpression cluster: | C4079_CD4_CD8_CD14_cerebellum_CD19_Natural_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.45e-16 | 136 |
classical monocyte | 2.29e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.29e-15 | 42 |
nongranular leukocyte | 2.15e-13 | 115 |
defensive cell | 3.55e-12 | 48 |
phagocyte | 3.55e-12 | 48 |
hematopoietic lineage restricted progenitor cell | 6.81e-12 | 120 |
hematopoietic stem cell | 7.35e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.54e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-10 | 161 |
hematopoietic cell | 3.43e-10 | 177 |
myeloid leukocyte | 1.25e-09 | 72 |
macrophage dendritic cell progenitor | 5.12e-08 | 61 |
monopoietic cell | 6.77e-08 | 59 |
monocyte | 6.77e-08 | 59 |
monoblast | 6.77e-08 | 59 |
promonocyte | 6.77e-08 | 59 |
granulocyte monocyte progenitor cell | 4.91e-07 | 67 |
CD4-positive, alpha-beta T cell | 5.13e-07 | 6 |