FFCP PHASE1:Hg19::chr2:217536828..217536834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:217536828..217536834,+ | |||
|coexpression_cluster_id=C252 | |||
|description=CAGE_peak_at_chr2:217536828..217536834,+ | |description=CAGE_peak_at_chr2:217536828..217536834,+ | ||
|id=chr2:217536828..217536834,+ | |id=chr2:217536828..217536834,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.40e-09!180;CL:0000128!1.58e-07!7;CL:0000126!1.58e-07!7;CL:0000127!1.58e-07!7;CL:0002453!1.58e-07!7 | |ontology_enrichment_celltype=CL:0000055!3.40e-09!180;CL:0000128!1.58e-07!7;CL:0000126!1.58e-07!7;CL:0000127!1.58e-07!7;CL:0002453!1.58e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000197;3.71e-19;6!CL:0000098;3.71e-19;6!CL:0002167;3.71e-19;6!CL:0000214;4.90e-10;3!CL:0000135;8.97e-10;3!CL:0000388;8.97e-10;3!CL:0002615;1.34e-09;3!CL:0002616;2.12e-08;1!CL:0000499;4.25e-08;28!CL:0002174;4.40e-08;1!CL:0000501;4.40e-08;1!CL:0002599;8.12e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.80e-19,6;CL:0000098,3.80e-19,6;CL:0002167,3.80e-19,6;CL:0000214,4.79e-10,3;CL:0000135,7.51e-10,3;CL:0000388,7.51e-10,3;CL:0002615,1.74e-09,3;CL:0002616,2.04e-08,1;CL:0000499,3.87e-08,28;CL:0002174,5.05e-08,1;CL:0000501,5.05e-08,1;CL:0002599,7.59e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;8.12e-08;1!UBERON:0003852;8.12e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.88e-21;3!DOID:127;6.88e-21;3!DOID:0060072;8.13e-16;4!DOID:3307;7.39e-15;2!DOID:3571;3.22e-08;1!DOID:2513;8.12e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.62e-21,3;DOID:127,7.62e-21,3;DOID:0060072,8.78e-16,4;DOID:3307,7.40e-15,2;DOID:3571,3.34e-08,1;DOID:2513,9.29e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.13e-12;9!UBERON:0000042;5.13e-12;9!UBERON:0006915;4.90e-10;3!UBERON:0007616;4.90e-10;3!UBERON:0002217;4.90e-10;3!UBERON:0002018;4.90e-10;3!UBERON:0007846;8.97e-10;3!UBERON:0000043;8.97e-10;3!UBERON:0007845;8.97e-10;3!UBERON:0005705;8.12e-08;1!UBERON:0008193;8.12e-08;1!UBERON:0010912;8.12e-08;1!UBERON:0002514;8.12e-08;1!UBERON:0003457;8.12e-08;1!UBERON:0008907;8.12e-08;1!UBERON:0008001;8.12e-08;1!UBERON:0007213;8.12e-08;1!UBERON:0009891;8.12e-08;1!UBERON:0007914;8.12e-08;1!UBERON:0007375;8.12e-08;1!UBERON:0003323;8.12e-08;1!UBERON:0010258;8.12e-08;1!UBERON:0005253;8.12e-08;1!UBERON:0007842;8.12e-08;1!UBERON:0002397;8.12e-08;1!UBERON:0003113;8.12e-08;1!UBERON:0003277;8.12e-08;1!UBERON:0001709;8.12e-08;1!UBERON:0002244;8.12e-08;1!UBERON:0005620;8.12e-08;1!UBERON:0010364;8.12e-08;1!UBERON:0004288;8.12e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.79e-10,3;UBERON:0007616,4.79e-10,3;UBERON:0002217,4.79e-10,3;UBERON:0002018,4.79e-10,3;UBERON:0007846,7.51e-10,3;UBERON:0000043,7.51e-10,3;UBERON:0007845,7.51e-10,3;UBERON:0004457,5.37e-09,12;UBERON:0000042,5.37e-09,12;UBERON:0005705,1.06e-07,1;UBERON:0008193,1.06e-07,1;UBERON:0010912,1.06e-07,1;UBERON:0002514,1.06e-07,1;UBERON:0003457,1.06e-07,1;UBERON:0008907,1.06e-07,1;UBERON:0008001,1.06e-07,1;UBERON:0007213,1.06e-07,1;UBERON:0009891,1.06e-07,1;UBERON:0007914,1.06e-07,1;UBERON:0009292,1.06e-07,1;UBERON:0003099,1.06e-07,1;UBERON:0007375,1.06e-07,1;UBERON:0003323,1.06e-07,1;UBERON:0010258,1.06e-07,1;UBERON:0007842,1.06e-07,1;UBERON:0009494,1.06e-07,1;UBERON:0010042,1.06e-07,1;UBERON:0010045,1.06e-07,1;UBERON:0010259,1.06e-07,1;UBERON:0010359,1.06e-07,1;UBERON:0009526,1.06e-07,1;UBERON:0002397,1.06e-07,1;UBERON:0003113,1.06e-07,1;UBERON:0003277,1.06e-07,1;UBERON:0001709,1.06e-07,1;UBERON:0004066,1.06e-07,1;UBERON:0002244,1.06e-07,1;UBERON:0005620,1.06e-07,1;UBERON:0004362,1.06e-07,1;UBERON:0010364,1.06e-07,1;UBERON:0010046,1.06e-07,1;UBERON:0005868,1.06e-07,1;UBERON:0007238,1.06e-07,1;UBERON:0004288,1.06e-07,1;UBERON:0004068,1.06e-07,1;UBERON:0010334,1.06e-07,1;UBERON:0003852,1.06e-07,1;UBERON:0010253,1.06e-07,1 | |||
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|phase1_expression=0.54503513781167,0,0.140954404095971,1.0007329835313,1.34088328328186,7.85104671690332,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.531876233169741,0,0,0,0,0.714889968290738,0,0,0,2.48774364119782,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5094066762418,8.20773348466944,13.0893004478166,7.84847480451178,0,0,0,0,0,0.173767228936166,0.979005787313703,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,1.49258782613989,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0.744316738719335,0,0,0,0.42793898803392,2.22742273548156,0,0.359744915166629,0.54907405947211,0,0,0,0,1.46290121726877,0,1.05650146756755,0.136499911407986,0.707027159768564,0,0.551365343546124,1.32687795048244,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,3.16661452946496,2.96365403663912,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48482340416319,0,0,0,0,0,0,0.597743964753209,0,0,0.511343412510774,0,1.24415835064723,0,0,0,0.197286811273867,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0.104602846312333,1.83596791745379,0,0,0,0,2.14882720709979,0,0,0.229160424011684,0,0,0,0,0,3.60299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.5085370753095,1.08599920350743,5.18532894720761,3.91904832131291,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0.554805861502613,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0,0,0,0,0,0,0,0,1.05802783107205,6.4311550244172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0,0.647782773655864,0,0.214429632529969,0,0,0.173858272302579,6.41369091784202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84870251452567,2.16313281061895,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0.381882949668989,0,0,0,0,0.143444410785353,0,0,0,3.8614456457388,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p@chr2:217536828..217536834,+ | |short_description=p@chr2:217536828..217536834,+ | ||
}} | }} |
Latest revision as of 06:25, 29 July 2015
Short description: | p@chr2:217536828..217536834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:217536828..217536834, + |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.80e-19 | 6 |
sensory epithelial cell | 3.80e-19 | 6 |
olfactory epithelial cell | 3.80e-19 | 6 |
synovial cell | 4.79e-10 | 3 |
fibrocyte | 7.51e-10 | 3 |
tendon cell | 7.51e-10 | 3 |
adipocyte of omentum tissue | 1.74e-09 | 3 |
perirenal adipocyte cell | 2.04e-08 | 1 |
stromal cell | 3.87e-08 | 28 |
follicular cell of ovary | 5.05e-08 | 1 |
granulosa cell | 5.05e-08 | 1 |
smooth muscle cell of the esophagus | 7.59e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.62e-21 | 3 |
leiomyoma | 7.62e-21 | 3 |
benign neoplasm | 8.78e-16 | 4 |
teratoma | 7.40e-15 | 2 |
liver cancer | 3.34e-08 | 1 |
basal cell carcinoma | 9.29e-08 | 1 |