FFCP PHASE1:Hg19::chr3:147131185..147131202,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:147131185..147131202,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr3:147131185..147131202,+ | |||
|id=chr3:147131185..147131202,+ | |||
|ontology_enrichment_celltype=CL:0000243!3.72e-11!15;CL:0000125!3.72e-11!15;CL:0000030!3.72e-11!15;CL:0000339!3.72e-11!15;CL:0000095!1.13e-09!17;CL:0000123!1.13e-09!17;CL:0002319!1.43e-08!25;CL:0000133!2.11e-08!59;CL:0000333!8.26e-08!41;CL:0000221!7.45e-07!71;CL:0000708!7.78e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000708;2.24e-23;3!CL:0002575;6.21e-17;2!CL:0000346;2.09e-11;3!CL:1000428;2.09e-11;3!CL:0002603;4.19e-11;3!CL:0000669;6.47e-09;4!CL:0000327;2.11e-08;15!CL:0002559;3.51e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,9.24e-24,3;CL:0002575,5.32e-17,2;CL:0000346,1.57e-11,3;CL:1000428,1.57e-11,3;CL:0002603,8.14e-11,3;CL:0000669,5.99e-09,4;CL:0000327,1.70e-08,15;CL:0002559,2.97e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.83e-25;3!UBERON:0006241;4.19e-11;3!UBERON:0003057;4.19e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.33e-32!82;UBERON:0000073!1.27e-31!94;UBERON:0001016!1.27e-31!94;UBERON:0005743!3.27e-30!86;UBERON:0000955!4.82e-29!69;UBERON:0006238!4.82e-29!69;UBERON:0002616!5.77e-26!59;UBERON:0001049!2.13e-25!57;UBERON:0005068!2.13e-25!57;UBERON:0006241!2.13e-25!57;UBERON:0007135!2.13e-25!57;UBERON:0003075!2.59e-22!86;UBERON:0007284!2.59e-22!86;UBERON:0003076!8.72e-22!15;UBERON:0003057!8.72e-22!15;UBERON:0002346!8.89e-21!90;UBERON:0004121!2.25e-20!169;UBERON:0000924!1.63e-19!173;UBERON:0006601!1.63e-19!173;UBERON:0000033!6.06e-18!123;UBERON:0004733!6.64e-17!12;UBERON:0002028!6.64e-17!12;UBERON:0007277!6.64e-17!12;UBERON:0000153!1.72e-16!129;UBERON:0007811!1.72e-16!129;UBERON:0004732!2.29e-15!13;UBERON:0002680!1.10e-12!9;UBERON:0001895!1.10e-12!9;UBERON:0010092!1.10e-12!9;UBERON:0002037!5.09e-12!6;UBERON:0006215!5.09e-12!6;UBERON:0002780!1.23e-10!41;UBERON:0001890!1.23e-10!41;UBERON:0006240!1.23e-10!41;UBERON:0003056!2.59e-10!61;UBERON:0003080!2.89e-10!42;UBERON:0002200!5.20e-10!11;UBERON:0006876!5.20e-10!11;UBERON:0005174!2.41e-09!5;UBERON:0001137!2.41e-09!5;UBERON:0001893!2.54e-09!34;UBERON:0000475!3.42e-09!365;UBERON:0001869!9.28e-09!32;UBERON:0002791!1.52e-08!33;UBERON:0000488!4.24e-08!4;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0007023!1.37e-07!115;UBERON:0002097!6.87e-07!40;UBERON:0003210!7.78e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.18e-33;6!UBERON:0003210;2.24e-23;3!UBERON:0004733;4.48e-23;12!UBERON:0002028;4.48e-23;12!UBERON:0002680;7.98e-22;9!UBERON:0001895;7.98e-22;9!UBERON:0004732;2.87e-21;13!UBERON:0000412;2.09e-11;3!UBERON:0001992;2.09e-11;3!UBERON:0002240;4.19e-11;3!UBERON:0005174;4.19e-11;3!UBERON:0001137;4.19e-11;3!UBERON:0001016;2.90e-08;83!UBERON:0002073;3.51e-07;5!UBERON:0005284;5.31e-07;5!UBERON:0006876;9.27e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.15e-32,6;UBERON:0006215,2.15e-32,6;UBERON:0003076,8.48e-32,15;UBERON:0003057,8.48e-32,15;UBERON:0003210,9.24e-24,3;UBERON:0004733,8.16e-23,12;UBERON:0002028,8.16e-23,12;UBERON:0007277,8.16e-23,12;UBERON:0002680,1.40e-21,9;UBERON:0001895,1.40e-21,9;UBERON:0010092,1.40e-21,9;UBERON:0004732,4.98e-21,13;UBERON:0001017,2.80e-13,81;UBERON:0001049,7.26e-12,56;UBERON:0005068,7.26e-12,56;UBERON:0006241,7.26e-12,56;UBERON:0007135,7.26e-12,56;UBERON:0001016,9.43e-12,89;UBERON:0000412,1.57e-11,3;UBERON:0001992,1.57e-11,3;UBERON:0002240,3.99e-11,3;UBERON:0005174,3.99e-11,3;UBERON:0001137,3.99e-11,3;UBERON:0010371,4.90e-10,104;UBERON:0000955,2.21e-09,68;UBERON:0006238,2.21e-09,68;UBERON:0003075,2.67e-09,82;UBERON:0007284,2.67e-09,82;UBERON:0002346,8.69e-09,86;UBERON:0004121,2.39e-08,171;UBERON:0000924,2.39e-08,171;UBERON:0006601,2.39e-08,171;UBERON:0000073,4.50e-08,53;UBERON:0002616,4.50e-08,53;UBERON:0010314,1.95e-07,132;UBERON:0002073,2.97e-07,5;UBERON:0005086,2.97e-07,5;UBERON:0005284,4.56e-07,5;UBERON:0006876,9.19e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,1.10808952269109,1.02000345622126,0.940364164434263,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,1.10864698731282,0.87834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,1.72852777344,0,0,0,0,0,0.485618833104395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.0920498986422993,0,1.06502877754984,0.403008392910561,0,0,0,0,0,0,0.116193942869518,0.621966330092223,0,0,1.56449532329816,3.85944562915731,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23344192779897,1.30788020649984,1.6134422880609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,1.27047312111232,0,0,0.167516265334349,0,0,0,0,0.24538298343828,1.50051156317903,0.271265023699736,0,0,0,0,0,0,0,0,0,0,2.74121620447837,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0,0,0,0.275673144969061,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.472775363535873,0,1.16641845353302,0,0.885741385813839,0.120596438625408,7.62908681585416,4.97606669690511,13.0040952339561,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.539209063845416,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0.195551382734803,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,1.14681839138014,0.554645257684261,0.124192805882767,0.968440444553616,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,2.18789923607288,0,0,0,0,0,1.00885116665647,0,0,0,0,0,0.475788130837822,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0.116241425368125,1.56472445072321,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,1.17785080268967,0.594092800654172,1.2679671827502,0,0,0,0,0,0,0,0,0,0,2.20880187070458,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,0,0.267964130156178,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr3:147131185..147131202,+ | |||
}} |
Latest revision as of 16:45, 29 July 2015
Short description: | p@chr3:147131185..147131202, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147131185..147131202, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 9.24e-24 | 3 |
central nervous system pericyte | 5.32e-17 | 2 |
hair follicle dermal papilla cell | 1.57e-11 | 3 |
stem cell of epidermis | 1.57e-11 | 3 |
astrocyte of the cerebellum | 8.14e-11 | 3 |
pericyte cell | 5.99e-09 | 4 |
extracellular matrix secreting cell | 1.70e-08 | 15 |
hair follicle cell | 2.97e-07 | 5 |