FFCP PHASE1:Hg19::chr3:196366873..196366890,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:196366873..196366890,- | |||
|coexpression_cluster_id=C2737 | |||
|description=CAGE_peak_at_chr3:196366873..196366890,- | |description=CAGE_peak_at_chr3:196366873..196366890,- | ||
|id=chr3:196366873..196366890,- | |id=chr3:196366873..196366890,- | ||
|ontology_enrichment_celltype=CL:0000037!2.84e-77!172;CL:0000566!2.84e-77!172;CL:0002032!2.77e-73!165;CL:0000837!2.77e-73!165;CL:0000988!3.26e-73!182;CL:0000738!1.25e-57!140;CL:0002031!2.55e-53!124;CL:0002087!8.05e-50!119;CL:0000763!6.44e-49!112;CL:0000049!6.44e-49!112;CL:0000557!1.03e-31!71;CL:0000839!2.49e-30!70;CL:0000766!1.19e-28!76;CL:0002009!3.02e-28!65;CL:0002194!1.17e-26!63;CL:0000576!1.17e-26!63;CL:0000040!1.17e-26!63;CL:0000559!1.17e-26!63;CL:0002057!2.40e-21!42;CL:0000542!3.58e-20!53;CL:0000051!3.58e-20!53;CL:0000838!1.04e-19!52;CL:0000860!6.83e-19!45;CL:0000134!4.17e-13!358;CL:0000084!3.18e-12!25;CL:0000827!3.18e-12!25;CL:0002320!4.83e-12!365;CL:0000219!2.56e-10!390;CL:0002393!4.99e-09!9;CL:0002397!4.99e-09!9;CL:0000990!1.14e-08!8;CL:0000791!1.75e-08!18;CL:0000789!1.75e-08!18;CL:0002420!1.75e-08!18;CL:0002419!1.75e-08!18;CL:0000790!1.75e-08!18;CL:0000625!3.96e-08!11;CL:0000451!5.07e-08!10;CL:0000945!1.94e-07!24;CL:0000826!1.94e-07!24 | |ontology_enrichment_celltype=CL:0000037!2.84e-77!172;CL:0000566!2.84e-77!172;CL:0002032!2.77e-73!165;CL:0000837!2.77e-73!165;CL:0000988!3.26e-73!182;CL:0000738!1.25e-57!140;CL:0002031!2.55e-53!124;CL:0002087!8.05e-50!119;CL:0000763!6.44e-49!112;CL:0000049!6.44e-49!112;CL:0000557!1.03e-31!71;CL:0000839!2.49e-30!70;CL:0000766!1.19e-28!76;CL:0002009!3.02e-28!65;CL:0002194!1.17e-26!63;CL:0000576!1.17e-26!63;CL:0000040!1.17e-26!63;CL:0000559!1.17e-26!63;CL:0002057!2.40e-21!42;CL:0000542!3.58e-20!53;CL:0000051!3.58e-20!53;CL:0000838!1.04e-19!52;CL:0000860!6.83e-19!45;CL:0000134!4.17e-13!358;CL:0000084!3.18e-12!25;CL:0000827!3.18e-12!25;CL:0002320!4.83e-12!365;CL:0000219!2.56e-10!390;CL:0002393!4.99e-09!9;CL:0002397!4.99e-09!9;CL:0000990!1.14e-08!8;CL:0000791!1.75e-08!18;CL:0000789!1.75e-08!18;CL:0002420!1.75e-08!18;CL:0002419!1.75e-08!18;CL:0000790!1.75e-08!18;CL:0000625!3.96e-08!11;CL:0000451!5.07e-08!10;CL:0000945!1.94e-07!24;CL:0000826!1.94e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.23e-16;48!CL:0000473;2.04e-15;39!CL:0000234;2.04e-15;39!CL:0000766;7.09e-15;69!CL:0000763;7.97e-15;100!CL:0000860;9.53e-15;33!CL:0002057;9.53e-15;33!CL:0000738;2.57e-13;136!CL:0000988;4.52e-13;177!CL:0000990;1.05e-12;8!CL:0002087;1.57e-12;104!CL:0000451;2.40e-12;10!CL:0000084;4.64e-12;25!CL:0002393;8.49e-11;6!CL:0002397;8.49e-11;6!CL:0000542;3.75e-10;53!CL:0000453;3.23e-09;5!CL:0000625;1.84e-08;11!CL:0000840;3.06e-08;5!CL:0000791;3.62e-07;18!CL:0000789;3.62e-07;18!CL:0002419;3.62e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.64e-85,168;CL:0002032,2.18e-81,161;CL:0000837,2.18e-81,161;CL:0000988,3.57e-79,177;CL:0000738,8.30e-61,136;CL:0000763,2.03e-60,108;CL:0000049,2.03e-60,108;CL:0002031,7.83e-56,120;CL:0002087,4.08e-50,115;CL:0000557,6.60e-38,67;CL:0002009,6.55e-35,61;CL:0000839,4.54e-34,66;CL:0000766,1.67e-33,72;CL:0002194,2.91e-32,59;CL:0000576,2.91e-32,59;CL:0000040,2.91e-32,59;CL:0000559,2.91e-32,59;CL:0000473,2.10e-31,48;CL:0000234,2.10e-31,48;CL:0000860,3.90e-27,42;CL:0002057,3.90e-27,42;CL:0000134,1.32e-26,354;CL:0002320,1.48e-25,361;CL:0000219,1.19e-22,386;CL:0000838,5.05e-18,52;CL:0000542,1.60e-17,53;CL:0000051,1.60e-17,53;CL:0000048,2.21e-17,427;CL:0000723,9.11e-17,433;CL:0000034,9.93e-17,441;CL:0002393,2.81e-15,9;CL:0002397,2.81e-15,9;CL:0000990,1.17e-12,8;CL:0000451,3.31e-12,10;CL:0000084,5.53e-12,25;CL:0000827,5.53e-12,25;CL:0000453,3.61e-09,5;CL:0000625,1.97e-08,11;CL:0000840,3.19e-08,5;CL:0001029,3.19e-08,5;CL:0000791,4.18e-07,18;CL:0000789,4.18e-07,18;CL:0002420,4.18e-07,18;CL:0002419,4.18e-07,18;CL:0000790,4.18e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;7.26e-19;42!CL:0000049;1.60e-16;108!CL:0000051;3.75e-10;53!CL:0000790;3.62e-07;18 | |||
|ontology_enrichment_disease=DOID:1240!6.58e-21!39;DOID:2531!1.61e-19!51;DOID:0060083!1.61e-19!51;DOID:8692!2.77e-15!31 | |ontology_enrichment_disease=DOID:1240!6.58e-21!39;DOID:2531!1.61e-19!51;DOID:0060083!1.61e-19!51;DOID:8692!2.77e-15!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.34e-17;39!DOID:8692;6.20e-17;31!DOID:2531;7.91e-12;51!DOID:0060083;7.91e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.60e-24,39;DOID:2531,6.41e-18,51;DOID:0060083,6.41e-18,51;DOID:8692,3.30e-17,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.57e-39!102;UBERON:0003061!3.57e-39!102;UBERON:0002193!7.78e-37!112;UBERON:0002371!6.15e-28!80;UBERON:0001474!2.97e-24!86;UBERON:0002405!5.04e-23!115;UBERON:0004765!8.84e-18!101;UBERON:0001434!8.84e-18!101;UBERON:0002384!9.20e-12!375;UBERON:0000178!2.89e-08!15;UBERON:0000179!2.89e-08!15;UBERON:0000463!2.89e-08!15;UBERON:0003081!1.07e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!3.57e-39!102;UBERON:0003061!3.57e-39!102;UBERON:0002193!7.78e-37!112;UBERON:0002371!6.15e-28!80;UBERON:0001474!2.97e-24!86;UBERON:0002405!5.04e-23!115;UBERON:0004765!8.84e-18!101;UBERON:0001434!8.84e-18!101;UBERON:0002384!9.20e-12!375;UBERON:0000178!2.89e-08!15;UBERON:0000179!2.89e-08!15;UBERON:0000463!2.89e-08!15;UBERON:0003081!1.07e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-37,98;UBERON:0003061,1.04e-37,98;UBERON:0002371,1.17e-33,76;UBERON:0002193,1.20e-32,108;UBERON:0001474,3.63e-30,82;UBERON:0002405,3.46e-29,93;UBERON:0004765,3.01e-26,90;UBERON:0002384,5.94e-25,371;UBERON:0001434,2.96e-22,100;UBERON:0003081,4.05e-10,203;UBERON:0002204,2.34e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,1.06978768047132,1.55991119954897,1.41679406364623,1.57345710739562,1.15148819429164,1.39334510984468,0,0,0,0,0,3.52320527201817,2.21598163412751,2.00544447470142,2.17010870715852,0.895661896959697,0.32389366601898,1.28787783817093,1.45398238779565,2.64513160582167,1.21292030593908,1.16214518452842,2.05583944010913,1.85823822537062,1.7261543539329,1.5369642391746,1.6553756092201,1.37898272294647,2.5819387343353,0,0.941211697713023,0.545812300115692,0.674170453335254,1.53041946185451,2.56743221660875,0.639337125799041,0.989553900560148,1.99463657621632,0.852449501065388,0,0,1.24564449799115,1.7587406567972,2.08593167368081,2.38907729175628,0,0.368277635987565,0,5.0701268714866,6.80333759888139,5.03180749220102,2.3589012540764,2.10247649978109,1.6072558669708,4.27519115611873,3.77941686678271,4.38393969035121,3.51992488922645,0,0.889509253863555,0,0.400395987036012,1.72425731986345,1.98313461835459,0,1.1384259382189,1.17447437874188,1.14681968437569,0,0.560508562981536,6.847986204152,0,0,0.205601498999509,1.5046784585161,0.32592226663359,0.473447805734733,0,2.78526142212934,0.589211814949674,1.10766947291811,1.08321545506006,1.0247305578054,0.520237390239513,0.822189523018381,1.10540007114339,1.44901542867526,0.14828656316206,0,0,2.60611488204402,1.14966148080576,2.06176467289578,0.759059076058509,1.91139248594458,3.25541726928209,4.75226022224187,1.05402583354441,1.27986611154418,2.49861453104692,2.13099526839615,2.46338399076314,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,37.3229502702886,33.9552987733571,15.821997301745,0.238490624305342,1.14398982156026,0,0,0,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,7.06340959063441,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0.492434012174795,31.1225672635186,6.24250881612659,0,0,0,0,0,0,1.47798971368783,0.44024217006613,1.03664057770386,1.44119953416961,0.37872730027914,0,0,0,1.71072446022705,0.308482478109971,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,0.502257091432126,16.8667151586425,0,0,0,0,0,0,2.4658731678576,1.57624608161542,1.2937654491571,0.641715181398742,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0.620304078368662,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.877039506583738,1.0457418040996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,4.58782324285425,1.70894156152249,0.952927101831156,0.411362273086194,0.648473311192717,2.70015718619057,1.58625035258854,1.1750647824022,0,0,0.743212700502875,0.144269212976445,4.97992903438899,7.01475600006818,17.363405314655,7.4687094351623,2.32840940996271,0,2.52717460302113,1.59764275323235,1.56679895773023,0,6.43308755646092,4.49646610290359,3.02699560786571,1.27753871307098,1.03051603426729,0.614481528616916,1.11838053946208,0.667396566847634,0.390776190804081,7.2385605212763,0,0.811367035427949,2.99764771198038,1.4098700508785,0,0.439524537815682,0,9.36124427930818,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0,0.276283915531148,0,0,1.6001024709939,0,0,0,7.1620131831762,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,30.6579894587209,16.1689664086876,6.14983223030579,0.225595660617181,0.19606253431774,0,0.75901493089674,3.33766815858795,0,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0,0.741383633679017,0.208843899010911,0.269604531922708,0,0.468528891450678,0.182454789215666,0,0.728341138602278,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,5.10986352267889,0,3.15464825135177,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.338693328263138,0,0.272406812223151,0,0.275078873194468,0,5.84932118033901,2.32140586367385,0.121499113316049,0,0.157611414598396,0,0,0,0,0,0,0,0,0.864221491201268,0,0,1.80603545648546,0,0.113312091520126,0.146552233678082,2.65013777824443,0,0,0,0,0.106787412567695,0.471612915298998,0.828478110694391,0.992332043623902,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30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|short_description=p@chr3:196366873..196366890,- | |short_description=p@chr3:196366873..196366890,- | ||
}} | }} |
Latest revision as of 19:52, 29 July 2015
Short description: | p@chr3:196366873..196366890, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:196366873..196366890, - |
Coexpression cluster: | C2737_Monocytederived_granulocyte_chronic_Dendritic_Basophils_Macrophage_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-37 | 98 |
blood island | 1.04e-37 | 98 |
bone marrow | 1.17e-33 | 76 |
hemolymphoid system | 1.20e-32 | 108 |
bone element | 3.63e-30 | 82 |
immune system | 3.46e-29 | 93 |
skeletal element | 3.01e-26 | 90 |
connective tissue | 5.94e-25 | 371 |
skeletal system | 2.96e-22 | 100 |
lateral plate mesoderm | 4.05e-10 | 203 |
musculoskeletal system | 2.34e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.60e-24 | 39 |
hematologic cancer | 6.41e-18 | 51 |
immune system cancer | 6.41e-18 | 51 |
myeloid leukemia | 3.30e-17 | 31 |