FFCP PHASE1:Hg19::chr4:55981146..55981149,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:55981146..55981149,- | |||
|description=CAGE_peak_at_chr4:55981146..55981149,- | |||
|id=chr4:55981146..55981149,- | |||
|ontology_enrichment_celltype=CL:0002139!9.95e-27!24;CL:0000115!2.60e-23!35;CL:0000071!4.50e-19!18;CL:0002546!4.50e-19!18;CL:0002078!4.04e-17!44;CL:0000213!1.90e-15!57;CL:0000215!1.90e-15!57;CL:0000222!4.79e-11!119;CL:1000413!1.21e-10!9;CL:0002322!7.16e-10!5;CL:0005020!2.65e-09!6;CL:0002138!2.65e-09!6;CL:0005022!2.65e-09!6;CL:0002544!2.22e-08!6;CL:0002543!9.91e-08!6;CL:0002321!7.78e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000115;6.27e-44;36!CL:0002138;4.31e-33;6!CL:0002139;2.68e-32;24!CL:0002078;6.31e-27;45!CL:0002188;4.35e-23;5!CL:0002144;8.74e-18;3!CL:1000746;1.09e-16;7!CL:1000612;1.09e-16;7!CL:0000213;3.66e-16;58!CL:0000215;3.66e-16;58!CL:0000071;1.89e-11;18!CL:0002681;5.55e-10;12!CL:0002584;5.55e-10;12!CL:1000449;4.32e-08;15!CL:0002262;1.09e-07;2!CL:1000398;1.09e-07;2!CL:1000497;3.38e-07;17!CL:0002518;3.38e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.43e-48,36;CL:0002078,3.27e-38,45;CL:0005020,3.98e-33,6;CL:0002138,3.98e-33,6;CL:0005022,3.98e-33,6;CL:0002139,2.63e-32,24;CL:0000213,2.37e-29,58;CL:0000215,2.37e-29,58;CL:0002188,7.94e-23,5;CL:0002144,9.14e-18,3;CL:1000746,1.68e-16,7;CL:1000612,1.68e-16,7;CL:0000222,2.55e-13,121;CL:0000071,1.91e-11,18;CL:0002546,1.91e-11,18;CL:0002681,7.10e-10,12;CL:0002584,7.10e-10,12;CL:1000449,5.25e-08,15;CL:0002262,1.05e-07,2;CL:1000398,1.05e-07,2;CL:1000497,4.01e-07,17;CL:0002518,4.01e-07,17 | |||
|ontology_enrichment_development_v019=CL:0005022;4.31e-33;6!CL:0002546;1.89e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.50e-19!18;UBERON:0004638!4.50e-19!18;UBERON:0004852!4.50e-19!18;UBERON:0000055!1.29e-17!69;UBERON:0002049!1.71e-15!79;UBERON:0007798!1.71e-15!79;UBERON:0000487!7.13e-15!22;UBERON:0001009!1.28e-14!113;UBERON:0004872!1.47e-14!84;UBERON:0001981!1.75e-13!60;UBERON:0007500!1.75e-13!60;UBERON:0004537!1.75e-13!60;UBERON:0006965!1.75e-13!60;UBERON:0004535!3.32e-13!110;UBERON:0006914!1.28e-12!25;UBERON:0003915!1.21e-10!9;UBERON:0004700!1.21e-10!9;UBERON:0001917!1.21e-10!9;UBERON:0004111!1.78e-10!241;UBERON:0000477!2.95e-10!286;UBERON:0003914!5.27e-09!118;UBERON:0000119!1.36e-08!312;UBERON:0000483!2.71e-08!309;UBERON:0000025!4.11e-08!194;UBERON:0002465!2.39e-07!10;UBERON:0000947!2.40e-07!21;UBERON:0010191!2.40e-07!21;UBERON:0001473!8.24e-07!8;UBERON:0004536!8.24e-07!8;UBERON:0006558!8.24e-07!8;UBERON:0001637!8.24e-07!42;UBERON:0003509!8.24e-07!42;UBERON:0004572!8.24e-07!42;UBERON:0001638!9.21e-07!9;UBERON:0003920!9.21e-07!9;UBERON:0004582!9.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;6.29e-25;8!UBERON:0004536;6.29e-25;8!UBERON:0006558;6.29e-25;8!UBERON:0002465;5.09e-20;10!UBERON:0010523;8.74e-18;3!UBERON:0001915;8.74e-18;3!UBERON:0001982;8.74e-18;3!UBERON:0000074;1.09e-16;7!UBERON:0001229;1.09e-16;7!UBERON:0002426;1.04e-13;1!UBERON:0003831;1.04e-13;1!UBERON:0003898;1.04e-13;1!UBERON:0004830;1.04e-13;1!UBERON:0003830;1.04e-13;1!UBERON:0005175;1.04e-13;1!UBERON:0001774;1.04e-13;1!UBERON:0001103;1.04e-13;1!UBERON:0000353;1.13e-13;15!UBERON:0000055;1.28e-11;65!UBERON:0004638;1.89e-11;18!UBERON:0001986;1.89e-11;18!UBERON:0004852;1.89e-11;18!UBERON:0001225;5.55e-10;12!UBERON:0008987;5.55e-10;12!UBERON:0000487;2.07e-09;22!UBERON:0006914;2.64e-08;25!UBERON:0001851;4.32e-08;15!UBERON:0006555;4.32e-08;15!UBERON:0004819;4.32e-08;15!UBERON:0001285;4.32e-08;15!UBERON:0007684;4.32e-08;15!UBERON:0001281;1.09e-07;2!UBERON:0003497;1.09e-07;2!UBERON:0003909;1.09e-07;2!UBERON:0003835;1.09e-07;2!UBERON:0002405;1.41e-07;27!UBERON:0005090;1.70e-07;2!UBERON:0001630;1.70e-07;2!UBERON:0002049;2.74e-07;75!UBERON:0007798;2.74e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,5.92e-25,8;UBERON:0004536,5.92e-25,8;UBERON:0006558,5.92e-25,8;UBERON:0002465,4.86e-20,10;UBERON:0010523,9.14e-18,3;UBERON:0001915,9.14e-18,3;UBERON:0001982,9.14e-18,3;UBERON:0010532,1.68e-16,7;UBERON:0000074,1.68e-16,7;UBERON:0001229,1.68e-16,7;UBERON:0001230,1.68e-16,7;UBERON:0003220,1.68e-16,7;UBERON:0005749,1.68e-16,7;UBERON:0004199,1.68e-16,7;UBERON:0004209,1.68e-16,7;UBERON:0004198,1.68e-16,7;UBERON:0005103,1.61e-14,8;UBERON:0000083,1.61e-14,8;UBERON:0009201,1.61e-14,8;UBERON:0006553,1.61e-14,8;UBERON:0003074,1.61e-14,8;UBERON:0003060,1.61e-14,8;UBERON:0002426,6.65e-14,1;UBERON:0003831,6.65e-14,1;UBERON:0003898,6.65e-14,1;UBERON:0004830,6.65e-14,1;UBERON:0003830,6.65e-14,1;UBERON:0005175,6.65e-14,1;UBERON:0001774,6.65e-14,1;UBERON:0001103,6.65e-14,1;UBERON:0010084,6.65e-14,1;UBERON:0000055,7.37e-14,68;UBERON:0000353,1.44e-13,15;UBERON:0000080,5.65e-13,9;UBERON:0002120,5.65e-13,9;UBERON:0004875,5.65e-13,9;UBERON:0005721,5.65e-13,9;UBERON:0005754,5.65e-13,9;UBERON:0007297,5.65e-13,9;UBERON:0002049,5.95e-12,78;UBERON:0007798,5.95e-12,78;UBERON:0004638,1.91e-11,18;UBERON:0001986,1.91e-11,18;UBERON:0004852,1.91e-11,18;UBERON:0000058,9.13e-11,19;UBERON:0004876,1.01e-10,11;UBERON:0004535,3.21e-10,109;UBERON:0001009,6.51e-10,112;UBERON:0001225,7.10e-10,12;UBERON:0008987,7.10e-10,12;UBERON:0003887,7.10e-10,12;UBERON:0000487,2.10e-09,22;UBERON:0006914,2.67e-08,25;UBERON:0001851,5.25e-08,15;UBERON:0004211,5.25e-08,15;UBERON:0009773,5.25e-08,15;UBERON:0001231,5.25e-08,15;UBERON:0001285,5.25e-08,15;UBERON:0007684,5.25e-08,15;UBERON:0004208,5.25e-08,15;UBERON:0001281,1.05e-07,2;UBERON:0003497,1.05e-07,2;UBERON:0003909,1.05e-07,2;UBERON:0003835,1.05e-07,2;UBERON:0003914,1.34e-07,117;UBERON:0005090,1.36e-07,2;UBERON:0001630,1.36e-07,2;UBERON:0006555,1.55e-07,16;UBERON:0004819,1.55e-07,16;UBERON:0004111,4.63e-07,240 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0,0,2.20094433552054,1.25396979922086,1.29208379584664,1.06729878806013,0,1.20848795132744,0,4.39311703586705,0.367663080345869,0.81014194788176,0.625098097988558,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0,0,0.404132016209064,0.490385709340376,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.662648841607426,0.580969714347592,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.866198686566443,1.85194205030644,1.14152491340759,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02056223165909,1.0795795805107,3.08454505380579,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0.399358000997982,0.858452096273142,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0.482259445395058,0.412618309791701,1.66176135211674,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.3414369541879,0.691259661814092,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0.829169439458779,0,0,0.714193294391221,0.0645889098360061,0,0,0.190941474834495,0.404234377916439,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p@chr4:55981146..55981149,- | |||
}} |
Latest revision as of 05:42, 30 July 2015
Short description: | p@chr4:55981146..55981149, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:55981146..55981149, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.43e-48 | 36 |
meso-epithelial cell | 3.27e-38 | 45 |
lymphangioblast | 3.98e-33 | 6 |
endothelial cell of lymphatic vessel | 3.98e-33 | 6 |
vascular lymphangioblast | 3.98e-33 | 6 |
endothelial cell of vascular tree | 2.63e-32 | 24 |
lining cell | 2.37e-29 | 58 |
barrier cell | 2.37e-29 | 58 |
glomerular endothelial cell | 7.94e-23 | 5 |
capillary endothelial cell | 9.14e-18 | 3 |
glomerular cell | 1.68e-16 | 7 |
kidney corpuscule cell | 1.68e-16 | 7 |
mesodermal cell | 2.55e-13 | 121 |
blood vessel endothelial cell | 1.91e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.91e-11 | 18 |
kidney cortical cell | 7.10e-10 | 12 |
renal cortical epithelial cell | 7.10e-10 | 12 |
epithelial cell of nephron | 5.25e-08 | 15 |
endothelial cell of sinusoid | 1.05e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.05e-07 | 2 |
kidney cell | 4.01e-07 | 17 |
kidney epithelial cell | 4.01e-07 | 17 |