FFCP PHASE1:Hg19::chr5:87688084..87688103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_ENST00000508015_5end | |||
|cluster_id=chr5:87688084..87688103,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_ENST00000508015_5end | |||
|id=chr5:87688084..87688103,+ | |||
|ontology_enrichment_celltype=CL:0000128!4.69e-12!7;CL:0000126!4.69e-12!7;CL:0000127!4.69e-12!7;CL:0002453!4.69e-12!7;CL:0002605!1.33e-11!3;CL:0000047!3.10e-11!8;CL:0002319!4.95e-11!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;4.81e-32;3!CL:0002319;4.85e-24;25!CL:0000047;1.08e-21;2!CL:0000540;1.06e-16;6!CL:0000404;1.06e-16;6!CL:0000128;4.06e-14;7!CL:0000126;4.06e-14;7!CL:0000127;4.06e-14;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.37e-33,8;CL:0002605,3.69e-32,3;CL:0002319,4.70e-24,25;CL:0000540,1.12e-16,6;CL:0000031,1.12e-16,6;CL:0000404,1.12e-16,6;CL:0000128,3.63e-14,7;CL:0000126,3.63e-14,7;CL:0000127,3.63e-14,7;CL:0002453,3.63e-14,7;CL:0000133,8.15e-13,59;CL:0000221,2.33e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.06e-16;6!CL:0000133;1.85e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.39e-70!82;UBERON:0005743!7.12e-67!86;UBERON:0001049!4.35e-65!57;UBERON:0005068!4.35e-65!57;UBERON:0006241!4.35e-65!57;UBERON:0007135!4.35e-65!57;UBERON:0000073!1.21e-59!94;UBERON:0001016!1.21e-59!94;UBERON:0002616!9.73e-59!59;UBERON:0000955!3.79e-58!69;UBERON:0006238!3.79e-58!69;UBERON:0002780!3.16e-51!41;UBERON:0001890!3.16e-51!41;UBERON:0006240!3.16e-51!41;UBERON:0003080!7.29e-50!42;UBERON:0001893!5.26e-49!34;UBERON:0001869!4.28e-48!32;UBERON:0002791!2.37e-46!33;UBERON:0003075!1.46e-45!86;UBERON:0007284!1.46e-45!86;UBERON:0002020!7.89e-45!34;UBERON:0003528!7.89e-45!34;UBERON:0002346!3.95e-43!90;UBERON:0000956!5.53e-38!25;UBERON:0000203!5.53e-38!25;UBERON:0003056!4.26e-35!61;UBERON:0000033!1.50e-32!123;UBERON:0000153!1.34e-30!129;UBERON:0007811!1.34e-30!129;UBERON:0004121!1.70e-30!169;UBERON:0000924!1.50e-29!173;UBERON:0006601!1.50e-29!173;UBERON:0002619!2.48e-29!22;UBERON:0001950!3.80e-28!20;UBERON:0007023!1.02e-20!115;UBERON:0003076!1.06e-15!15;UBERON:0003057!1.06e-15!15;UBERON:0004733!1.22e-15!12;UBERON:0002028!1.22e-15!12;UBERON:0007277!1.22e-15!12;UBERON:0000025!6.05e-15!194;UBERON:0004732!2.45e-14!13;UBERON:0000200!1.56e-13!6;UBERON:0002021!6.56e-11!5;UBERON:0001896!1.13e-10!3;UBERON:0005290!1.13e-10!3;UBERON:0010096!1.13e-10!3;UBERON:0002771!1.38e-10!3;UBERON:0001871!1.60e-10!7;UBERON:0004111!2.75e-10!241;UBERON:0002420!5.73e-09!9;UBERON:0007245!5.73e-09!9;UBERON:0010009!5.73e-09!9;UBERON:0010011!5.73e-09!9;UBERON:0000454!5.73e-09!9;UBERON:0000064!8.55e-09!219;UBERON:0002308!1.08e-08!9;UBERON:0000125!1.08e-08!9;UBERON:0000477!1.40e-08!286;UBERON:0002037!2.10e-08!6;UBERON:0006215!2.10e-08!6;UBERON:0002680!2.51e-08!9;UBERON:0001895!2.51e-08!9;UBERON:0010092!2.51e-08!9;UBERON:0000475!3.40e-08!365;UBERON:0000369!7.30e-08!4;UBERON:0002435!7.30e-08!4;UBERON:0000204!7.30e-08!4;UBERON:0010082!7.30e-08!4;UBERON:0009663!1.36e-07!7;UBERON:0001897!1.46e-07!2;UBERON:0000483!2.34e-07!309;UBERON:0000119!3.34e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.92e-19;25!UBERON:0000203;2.92e-19;25!UBERON:0002791;6.01e-15;32!UBERON:0001869;7.11e-15;32!UBERON:0003528;9.54e-14;34!UBERON:0002020;9.54e-14;34!UBERON:0001893;8.49e-13;34!UBERON:0001017;1.01e-10;75!UBERON:0002780;3.77e-10;41!UBERON:0001890;3.77e-10;41!UBERON:0000955;9.51e-10;68!UBERON:0001016;1.18e-09;83!UBERON:0000073;7.53e-09;53!UBERON:0002616;7.53e-09;53!UBERON:0001950;2.44e-08;20!UBERON:0002619;1.26e-07;22!UBERON:0001871;6.98e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.31e-30,81;UBERON:0001016,6.16e-27,89;UBERON:0000956,2.97e-19,25;UBERON:0000203,2.97e-19,25;UBERON:0002791,4.87e-15,32;UBERON:0001869,4.87e-15,32;UBERON:0003528,3.83e-14,34;UBERON:0002020,3.83e-14,34;UBERON:0001893,3.83e-14,34;UBERON:0001049,9.86e-14,56;UBERON:0005068,9.86e-14,56;UBERON:0006241,9.86e-14,56;UBERON:0007135,9.86e-14,56;UBERON:0000955,1.20e-13,68;UBERON:0006238,1.20e-13,68;UBERON:0004121,3.56e-13,171;UBERON:0000924,3.56e-13,171;UBERON:0006601,3.56e-13,171;UBERON:0002780,1.12e-11,41;UBERON:0001890,1.12e-11,41;UBERON:0003080,1.12e-11,41;UBERON:0006240,1.12e-11,41;UBERON:0000073,1.51e-11,53;UBERON:0002616,1.51e-11,53;UBERON:0011216,5.00e-11,223;UBERON:0003075,4.56e-09,82;UBERON:0007284,4.56e-09,82;UBERON:0002346,1.35e-08,86;UBERON:0001950,2.59e-08,20;UBERON:0003056,1.09e-07,61;UBERON:0002619,1.33e-07,22;UBERON:0010371,6.41e-07,104;UBERON:0001871,7.63e-07,6 | |||
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| ||
|short_description=p2@ENST00000508015 | |||
}} | }} |
Latest revision as of 17:04, 30 July 2015
Short description: | p2@ENST00000508015 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000508015_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 72bp_to_ENST00000508015_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.37e-33 | 8 |
astrocyte of the cerebral cortex | 3.69e-32 | 3 |
neural cell | 4.70e-24 | 25 |
neuron | 1.12e-16 | 6 |
neuroblast | 1.12e-16 | 6 |
electrically signaling cell | 1.12e-16 | 6 |
oligodendrocyte | 3.63e-14 | 7 |
macroglial cell | 3.63e-14 | 7 |
astrocyte | 3.63e-14 | 7 |
oligodendrocyte precursor cell | 3.63e-14 | 7 |
neurectodermal cell | 8.15e-13 | 59 |
ectodermal cell | 2.33e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.31e-30 | 81 |
nervous system | 6.16e-27 | 89 |
cerebral cortex | 2.97e-19 | 25 |
pallium | 2.97e-19 | 25 |
regional part of telencephalon | 4.87e-15 | 32 |
cerebral hemisphere | 4.87e-15 | 32 |
brain grey matter | 3.83e-14 | 34 |
gray matter | 3.83e-14 | 34 |
telencephalon | 3.83e-14 | 34 |
neural tube | 9.86e-14 | 56 |
neural rod | 9.86e-14 | 56 |
future spinal cord | 9.86e-14 | 56 |
neural keel | 9.86e-14 | 56 |
brain | 1.20e-13 | 68 |
future brain | 1.20e-13 | 68 |
ectoderm-derived structure | 3.56e-13 | 171 |
ectoderm | 3.56e-13 | 171 |
presumptive ectoderm | 3.56e-13 | 171 |
regional part of forebrain | 1.12e-11 | 41 |
forebrain | 1.12e-11 | 41 |
anterior neural tube | 1.12e-11 | 41 |
future forebrain | 1.12e-11 | 41 |
regional part of nervous system | 1.51e-11 | 53 |
regional part of brain | 1.51e-11 | 53 |
organ system subdivision | 5.00e-11 | 223 |
neural plate | 4.56e-09 | 82 |
presumptive neural plate | 4.56e-09 | 82 |
neurectoderm | 1.35e-08 | 86 |
neocortex | 2.59e-08 | 20 |
pre-chordal neural plate | 1.09e-07 | 61 |
regional part of cerebral cortex | 1.33e-07 | 22 |
ecto-epithelium | 6.41e-07 | 104 |
temporal lobe | 7.63e-07 | 6 |