FFCP PHASE1:Hg19::chr6:128841895..128841914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:128841895..128841914,+ | |||
|description=CAGE_peak_at_chr6:128841895..128841914,+ | |description=CAGE_peak_at_chr6:128841895..128841914,+ | ||
|id=chr6:128841895..128841914,+ | |id=chr6:128841895..128841914,+ | ||
|ontology_enrichment_celltype=CL:0002319;1.02e-07;25!CL:0000128;1.56e-07;7!CL:0000126;1.56e-07;7!CL:0000127;1.56e-07;7 | |ontology_enrichment_celltype=CL:0000066!4.73e-12!254;CL:0002321!4.57e-11!248;CL:0000220!4.99e-11!246 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;1.02e-07;25!CL:0000128;1.56e-07;7!CL:0000126;1.56e-07;7!CL:0000127;1.56e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.98e-08,25;CL:0000128,1.47e-07,7;CL:0000126,1.47e-07,7;CL:0000127,1.47e-07,7;CL:0002453,1.47e-07,7;CL:0000221,2.62e-07,72;CL:0002321,3.38e-07,250;CL:0000095,8.42e-07,17;CL:0000123,8.42e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000956;7.51e-17;25!UBERON:0000203;7.51e-17;25!UBERON:0002619;2.03e-13;22!UBERON:0001869;2.08e-13;32!UBERON:0002791;2.12e-13;32!UBERON:0001950;3.97e-13;20!UBERON:0001893;9.50e-13;34!UBERON:0003528;1.26e-11;34!UBERON:0002020;1.26e-11;34!UBERON:0002780;1.32e-09;41!UBERON:0001890;1.32e-09;41!UBERON:0000073;7.41e-07;53!UBERON:0002616;7.41e-07;53!UBERON:0000200;9.00e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.65e-18!347;UBERON:0000119!9.55e-18!312;UBERON:0000483!7.98e-17!309;UBERON:0000475!7.94e-16!365;UBERON:0000924!3.72e-15!173;UBERON:0006601!3.72e-15!173;UBERON:0004121!1.21e-14!169;UBERON:0000033!1.26e-14!123;UBERON:0000153!3.13e-13!129;UBERON:0007811!3.13e-13!129;UBERON:0000477!7.78e-13!286;UBERON:0005743!5.43e-12!86;UBERON:0000468!6.85e-12!659;UBERON:0000064!7.25e-12!219;UBERON:0001893!2.44e-11!34;UBERON:0000073!3.88e-11!94;UBERON:0001016!3.88e-11!94;UBERON:0001017!4.16e-11!82;UBERON:0003056!4.53e-11!61;UBERON:0002020!4.57e-11!34;UBERON:0003528!4.57e-11!34;UBERON:0001869!5.43e-11!32;UBERON:0002791!5.59e-11!33;UBERON:0000956!1.28e-10!25;UBERON:0000203!1.28e-10!25;UBERON:0002780!1.50e-10!41;UBERON:0001890!1.50e-10!41;UBERON:0006240!1.50e-10!41;UBERON:0000955!3.18e-10!69;UBERON:0006238!3.18e-10!69;UBERON:0003080!6.73e-10!42;UBERON:0000922!7.86e-10!612;UBERON:0004111!8.40e-10!241;UBERON:0002616!1.22e-09!59;UBERON:0002346!1.27e-09!90;UBERON:0002050!3.49e-09!605;UBERON:0005423!3.49e-09!605;UBERON:0003075!3.56e-09!86;UBERON:0007284!3.56e-09!86;UBERON:0000923!3.98e-09!604;UBERON:0005291!3.98e-09!604;UBERON:0006598!3.98e-09!604;UBERON:0002532!3.98e-09!604;UBERON:0001049!6.09e-09!57;UBERON:0005068!6.09e-09!57;UBERON:0006241!6.09e-09!57;UBERON:0007135!6.09e-09!57;UBERON:0002619!6.80e-09!22;UBERON:0001950!5.04e-08!20;UBERON:0000467!6.78e-08!625;UBERON:0000480!1.01e-07!626;UBERON:0000025!3.06e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;7.51e-17;25!UBERON:0000203;7.51e-17;25!UBERON:0002619;2.03e-13;22!UBERON:0001869;2.08e-13;32!UBERON:0002791;2.12e-13;32!UBERON:0001950;3.97e-13;20!UBERON:0001893;9.50e-13;34!UBERON:0003528;1.26e-11;34!UBERON:0002020;1.26e-11;34!UBERON:0002780;1.32e-09;41!UBERON:0001890;1.32e-09;41!UBERON:0000073;7.41e-07;53!UBERON:0002616;7.41e-07;53!UBERON:0000200;9.00e-07;6 | |||
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| ||
|short_description=p@chr6:128841895..128841914,+ | |short_description=p@chr6:128841895..128841914,+ | ||
}} | }} |
Latest revision as of 19:16, 30 July 2015
Short description: | p@chr6:128841895..128841914, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:128841895..128841914, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.98e-08 | 25 |
oligodendrocyte | 1.47e-07 | 7 |
macroglial cell | 1.47e-07 | 7 |
astrocyte | 1.47e-07 | 7 |
oligodendrocyte precursor cell | 1.47e-07 | 7 |
ectodermal cell | 2.62e-07 | 72 |
embryonic cell | 3.38e-07 | 250 |
neuron associated cell | 8.42e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.42e-07 | 17 |