FFCP PHASE1:Hg19::chr7:129913535..129913544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:129913535..129913544,+ | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_at_chr7:129913535..129913544,+ | |description=CAGE_peak_at_chr7:129913535..129913544,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;6.30e-21;2!CL:1000398;6.30e-21;2 | |ontology_enrichment_celltype_v019=CL:0002262;6.30e-21;2!CL:1000398;6.30e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002262,6.96e-21,2;CL:1000398,6.96e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr7:129913535..129913544,+ | |short_description=p@chr7:129913535..129913544,+ | ||
}} | }} |
Latest revision as of 05:56, 31 July 2015
Short description: | p@chr7:129913535..129913544, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:129913535..129913544, + |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 6.96e-21 | 2 |
endothelial cell of hepatic sinusoid | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.21e-40 | 1 |
cranial nerve | 2.21e-40 | 1 |
nerve trunk | 2.21e-40 | 1 |
nerve connecting eye with brain | 2.21e-40 | 1 |
nerve | 2.21e-40 | 1 |
retinal neural layer | 2.21e-40 | 1 |
presumptive neural retina | 2.21e-40 | 1 |
neural tissue | 5.70e-21 | 2 |
multi cell component structure | 5.70e-21 | 2 |
neuron projection bundle | 5.70e-21 | 2 |
hepatic sinusoid | 6.96e-21 | 2 |
abdomen blood vessel | 6.96e-21 | 2 |
sinusoid | 6.96e-21 | 2 |
abdominal segment blood vessel | 6.96e-21 | 2 |
duodenum | 1.40e-14 | 2 |
liver parenchyma | 2.09e-14 | 3 |
liver lobule | 2.09e-14 | 3 |
hepatic duct | 2.09e-14 | 3 |
layer of retina | 3.42e-11 | 4 |
small intestine | 2.74e-09 | 4 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
bile duct | 7.25e-08 | 6 |
digestive system duct | 7.25e-08 | 6 |
temporal lobe | 5.70e-07 | 6 |
trunk blood vessel | 6.39e-07 | 7 |