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FFCP PHASE1:Mm9::chr8:74031641..74031665,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:74031641..74031665,-
|DHSsupport=NA
|short_description=p@chr8:74031641..74031665,-
|DPIdataset=NA
|description=CAGE_peak_at_chr8:74031641..74031665,-
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=742
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr8:74031641..74031665,-
|description=CAGE_peak_at_chr8:74031641..74031665,-
|id=chr8:74031641..74031665,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-08,23;CL:0000337,1.66e-08,23;CL:0002614,7.82e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.05e-13!52;UBERON:0005068!2.05e-13!52;UBERON:0006241!2.05e-13!52;UBERON:0007135!2.05e-13!52;UBERON:0001017!7.73e-13!73;UBERON:0005743!7.73e-13!73;UBERON:0000073!1.97e-12!75;UBERON:0001016!1.97e-12!75;UBERON:0000955!4.15e-12!50;UBERON:0006238!4.15e-12!50;UBERON:0002616!1.44e-11!49;UBERON:0000033!4.05e-11!63;UBERON:0004121!8.13e-11!102;UBERON:0000924!8.13e-11!102;UBERON:0006601!8.13e-11!102;UBERON:0002346!1.84e-10!71;UBERON:0003075!1.84e-10!71;UBERON:0007284!1.84e-10!71;UBERON:0002020!2.53e-10!34;UBERON:0004111!3.16e-10!122;UBERON:0000025!4.27e-10!114;UBERON:0000475!2.28e-08!200;UBERON:0003080!2.62e-08!40;UBERON:0002780!9.19e-08!39;UBERON:0001890!9.19e-08!39;UBERON:0006240!9.19e-08!39;UBERON:0002791!2.12e-07!29;UBERON:0003528!2.12e-07!29;UBERON:0001893!2.12e-07!29;UBERON:0003056!3.05e-07!49;UBERON:0002619!8.21e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.41e-23,54;UBERON:0001017,4.42e-22,73;UBERON:0001016,2.96e-21,75;UBERON:0001049,4.15e-20,52;UBERON:0005068,4.15e-20,52;UBERON:0006241,4.15e-20,52;UBERON:0007135,4.15e-20,52;UBERON:0004121,3.12e-17,95;UBERON:0000924,3.12e-17,95;UBERON:0006601,3.12e-17,95;UBERON:0002346,2.78e-16,64;UBERON:0003075,2.78e-16,64;UBERON:0007284,2.78e-16,64;UBERON:0003076,1.05e-15,12;UBERON:0003057,1.05e-15,12;UBERON:0002020,4.79e-15,34;UBERON:0000955,1.20e-13,47;UBERON:0006238,1.20e-13,47;UBERON:0010371,2.27e-13,73;UBERON:0002616,1.39e-12,46;UBERON:0002240,3.94e-12,6;UBERON:0005174,3.94e-12,6;UBERON:0001137,3.94e-12,6;UBERON:0001948,2.26e-10,5;UBERON:0002315,2.26e-10,5;UBERON:0010314,4.82e-10,92;UBERON:0002021,1.13e-09,10;UBERON:0000411,1.13e-09,10;UBERON:0001950,1.13e-09,10;UBERON:0003080,6.44e-09,40;UBERON:0003528,7.93e-09,29;UBERON:0002791,7.93e-09,29;UBERON:0001893,7.93e-09,29;UBERON:0002950,1.19e-08,4;UBERON:0001891,1.19e-08,4;UBERON:0009616,1.19e-08,4;UBERON:0010286,1.19e-08,4;UBERON:0002780,6.61e-08,39;UBERON:0001890,6.61e-08,39;UBERON:0006240,6.61e-08,39;UBERON:0007023,7.00e-08,51;UBERON:0003056,1.78e-07,49;UBERON:0002038,7.82e-07,3;UBERON:0009663,7.82e-07,3;UBERON:0009661,7.82e-07,3;UBERON:0000125,7.82e-07,3;UBERON:0002308,7.82e-07,3
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,1.90509202037889,0.61506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0.878744730937887,0.777719596297134,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,2.09720077362883,3.07374644257244,0,0.135005938331691,0.210324961351382,12.5686433137674,7.95126747425809,0,0.0958454710182364,0.919218786610021,5.50579404996943,3.31987079021488,3.99376986466233,0.131886287730194,0.548925861614458,0,10.3297709630511,4.50210088025344,3.20876320331301,6.48182888042069,6.97621235915604,1.4911955666024,0.075726193333184,0.151143120213571,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,1.29468941823586,2.22663208597237,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.502666365318702,0,1.01219549843938,0,0.485300549842228,0.220841518460394,0.969750506270444,0,11.7112318804619,6.91174132484402,0.255457055208591,0,0,0,5.69204429738326,1.37250180845588,0.251308704225729,2.78118912307642,1.79000820131231,3.1168206683934,2.10913641988085,0.101839363850316,0,0.252722758433675,1.47309299120532,0.130120442962704,0,0.180062129805349,0,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0,0,0,0.329119699826961,0,0.486412857275134,0.584799949701329,0.878200461164203,0.536825675041487,2.3131894342054,0.720332286654991,0,0,0,0,0,0,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0.198956472041151,0.779856348476481,0,0.216138049874694,0,0.569003702859245,0,3.38123207019241,0.203651327845314,0.581857461502877,0.420814919341911,0.442655759869801,0.738050739898011,0.784993639206874,1.1105744752962,0,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0.549122826376163,0,0.744281895337007,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0,0.714130922658041,0.195133647857799,0,0.664394068946325,0,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,4.33486592967038,3.7507739709505,0,1.00988370881749,0.315508219416257,0,0,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,2.89189184779626,0.709700426041343,0.178065603667255,0,0.659880491890142,1.32745138339963,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.542816324353403,0,0.164140899745061,0,4.82105785227325,0.341741761595705,0.82554747185289,0.370389054739423,0,0.546776910884101,0.686334519619568,0,0,0,3.81868247206045,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.785267825952089,0.388844919875379,1.86401793926078,0,0.149516546043979,0.165458490457098,0.777804753376191,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.632022241256357,0,0,0,0.537080087002444,0,0,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.467507608726276,0.906921534460845,2.66383144048878,4.93426211352116,3.18980771091749,0.386379188064381,0,0.183151624267265,0,0.501572104035363,2.82375921308533,0.920650473014354,3.43737308063638,1.20297227640581,2.05524755931193,0.755393897389701,2.70009000092722,2.2516060161211,1.35942722695261,1.03552062350364,0,0,0,0,0.209613162627982,0,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,1.90509202037889,0.61506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.218025156380447,0.878744730937887,0.777719596297134,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,2.09720077362883,3.07374644257244,0,0.135005938331691,0.210324961351382,12.5686433137674,7.95126747425809,0,0.0958454710182364,0.919218786610021,5.50579404996943,3.31987079021488,3.99376986466233,0.131886287730194,0.548925861614458,0,10.3297709630511,4.50210088025344,3.20876320331301,6.48182888042069,6.97621235915604,1.4911955666024,0.075726193333184,0.151143120213571,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,1.29468941823586,2.22663208597237,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0.502666365318702,0,1.01219549843938,0,0.485300549842228,0.220841518460394,0.969750506270444,0,11.7112318804619,6.91174132484402,0.255457055208591,0,0,0,5.69204429738326,1.37250180845588,0.251308704225729,2.78118912307642,1.79000820131231,3.1168206683934,2.10913641988085,0.101839363850316,0,0.252722758433675,1.47309299120532,0.130120442962704,0,0.180062129805349,0,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.621377317606506,0.234526059981096,0.36012412292203,0,0.590292695242212,0.154267112887378,0,0,0,0.329119699826961,0,0.486412857275134,0.584799949701329,0.878200461164203,0.536825675041487,2.3131894342054,0.720332286654991,0,0,0,0,0,0,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0.198956472041151,0.779856348476481,0,0.216138049874694,0,0.569003702859245,0,3.38123207019241,0.203651327845314,0.581857461502877,0.420814919341911,0.442655759869801,0.738050739898011,0.784993639206874,1.1105744752962,0,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0,0.549122826376163,0,0.744281895337007,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0.162964976442026,0.678980343100753,0.234690248288502,0,0.714130922658041,0.195133647857799,0,0.664394068946325,0,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,4.33486592967038,3.7507739709505,0,1.00988370881749,0.315508219416257,0,0,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,2.89189184779626,0.709700426041343,0.178065603667255,0,0.659880491890142,1.32745138339963,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0.32977250588296,0.322928853391811,0.542816324353403,0,0.164140899745061,0,4.82105785227325,0.341741761595705,0.82554747185289,0.370389054739423,0,0.546776910884101,0.686334519619568,0,0,0,3.81868247206045,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.785267825952089,0.388844919875379,1.86401793926078,0,0.149516546043979,0.165458490457098,0.777804753376191,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0.632022241256357,0,0,0,0.537080087002444,0,0,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0.467507608726276,0.906921534460845,2.66383144048878,4.93426211352116,3.18980771091749,0.386379188064381,0,0.183151624267265,0,0.501572104035363,2.82375921308533,0.920650473014354,3.43737308063638,1.20297227640581,2.05524755931193,0.755393897389701,2.70009000092722,2.2516060161211,1.35942722695261,1.03552062350364,0,0,0,0,0.209613162627982,0,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0.882365676478062,0.463735671240843
|short_description=p@chr8:74031641..74031665,-
}}
}}

Latest revision as of 01:55, 4 August 2015

Short description:p@chr8:74031641..74031665, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr8:74031641..74031665, -
Coexpression cluster:MCL_coexpression_mm9:742
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr8:74031641..74031665-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.66e-0823
neuroblast (sensu Vertebrata)1.66e-0823
neuron of the substantia nigra7.82e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.41e-2354
central nervous system4.42e-2273
nervous system2.96e-2175
neural tube4.15e-2052
neural rod4.15e-2052
future spinal cord4.15e-2052
neural keel4.15e-2052
ectoderm-derived structure3.12e-1795
ectoderm3.12e-1795
presumptive ectoderm3.12e-1795
neurectoderm2.78e-1664
neural plate2.78e-1664
presumptive neural plate2.78e-1664
posterior neural tube1.05e-1512
chordal neural plate1.05e-1512
gray matter4.79e-1534
brain1.20e-1347
future brain1.20e-1347
ecto-epithelium2.27e-1373
regional part of brain1.39e-1246
spinal cord3.94e-126
dorsal region element3.94e-126
dorsum3.94e-126
regional part of spinal cord2.26e-105
gray matter of spinal cord2.26e-105
structure with developmental contribution from neural crest4.82e-1092
occipital lobe1.13e-0910
visual cortex1.13e-0910
neocortex1.13e-0910
anterior neural tube6.44e-0940
brain grey matter7.93e-0929
regional part of telencephalon7.93e-0929
telencephalon7.93e-0929
regional part of midbrain1.19e-084
midbrain1.19e-084
presumptive midbrain1.19e-084
midbrain neural tube1.19e-084
regional part of forebrain6.61e-0839
forebrain6.61e-0839
future forebrain6.61e-0839
adult organism7.00e-0851
pre-chordal neural plate1.78e-0749
substantia nigra7.82e-073
telencephalic nucleus7.82e-073
midbrain nucleus7.82e-073
neural nucleus7.82e-073
nucleus of brain7.82e-073
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