FFCP PHASE1:Mm9::chr8:89996514..89996532,-: Difference between revisions
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{{FFCP|EntrezGene=12404|HGNC=|MCL_coexpression_id=30|UniProt=Q9R171|association_with_transcript=-6bp_to_ENSMUST00000034076_5end|description=CAGE_peak_2_at_Cbln1_5end|id=chr8:89996514..89996532,-|ontology_enrichment_celltype=CL:0000117!1.59e-16!23;CL:0000337!1.59e-16!23;CL:0000540!5.75e-11!33;CL:0000047!5.75e-11!33;CL:0000031!5.75e-11!33;CL:0000404!5.75e-11!33;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44;CL:0002319!1.34e-07!43;CL:0000393!1.44e-07!39;CL:0000211!1.44e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-24,23;CL:0000337,1.45e-24,23;CL:0000540,1.11e-14,33;CL:0000047,1.11e-14,33;CL:0000031,1.11e-14,33;CL:0000404,1.11e-14,33;CL:0000393,2.91e-11,39;CL:0000211,2.91e-11,39;CL:0002319,1.86e-10,43;CL:0000221,4.74e-10,44;CL:0000133,4.74e-10,44;CL:0002609,7.61e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.20e-24!73;UBERON:0005743!5.20e-24!73;UBERON:0001049!2.11e-23!52;UBERON:0005068!2.11e-23!52;UBERON:0006241!2.11e-23!52;UBERON:0007135!2.11e-23!52;UBERON:0000073!1.25e-22!75;UBERON:0001016!1.25e-22!75;UBERON:0000955!1.70e-22!50;UBERON:0006238!1.70e-22!50;UBERON:0002346!8.35e-22!71;UBERON:0003075!8.35e-22!71;UBERON:0007284!8.35e-22!71;UBERON:0002616!9.42e-22!49;UBERON:0000033!1.43e-21!63;UBERON:0003056!2.33e-18!49;UBERON:0004121!2.70e-18!102;UBERON:0000924!2.70e-18!102;UBERON:0006601!2.70e-18!102;UBERON:0003080!5.25e-18!40;UBERON:0002780!1.82e-17!39;UBERON:0001890!1.82e-17!39;UBERON:0006240!1.82e-17!39;UBERON:0002020!1.46e-14!34;UBERON:0002791!1.67e-11!29;UBERON:0003528!1.67e-11!29;UBERON:0001893!1.67e-11!29;UBERON:0007811!3.93e-11!86;UBERON:0000153!9.05e-10!94;UBERON:0001894!3.18e-07!10;UBERON:0006222!3.18e-07!10;UBERON:0002420!9.75e-07!8;UBERON:0007245!9.75e-07!8;UBERON:0010009!9.75e-07!8;UBERON:0010011!9.75e-07!8;UBERON:0000454!9.75e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.78e-35,54;UBERON:0001049,3.63e-32,52;UBERON:0005068,3.63e-32,52;UBERON:0006241,3.63e-32,52;UBERON:0007135,3.63e-32,52;UBERON:0001017,7.75e-31,73;UBERON:0001016,1.43e-29,75;UBERON:0000955,2.88e-27,47;UBERON:0006238,2.88e-27,47;UBERON:0002616,3.50e-26,46;UBERON:0002346,1.15e-24,64;UBERON:0003075,1.15e-24,64;UBERON:0007284,1.15e-24,64;UBERON:0003080,3.33e-23,40;UBERON:0002780,2.15e-22,39;UBERON:0001890,2.15e-22,39;UBERON:0006240,2.15e-22,39;UBERON:0004121,7.24e-21,95;UBERON:0000924,7.24e-21,95;UBERON:0006601,7.24e-21,95;UBERON:0010371,7.03e-20,73;UBERON:0003056,4.19e-18,49;UBERON:0002020,4.38e-18,34;UBERON:0010314,9.11e-14,92;UBERON:0003528,1.29e-13,29;UBERON:0002791,1.29e-13,29;UBERON:0001893,1.29e-13,29;UBERON:0001894,2.88e-10,10;UBERON:0006222,2.88e-10,10;UBERON:0002420,1.59e-09,8;UBERON:0007245,1.59e-09,8;UBERON:0010009,1.59e-09,8;UBERON:0010011,1.59e-09,8;UBERON:0000454,1.59e-09,8;UBERON:0003076,3.09e-09,12;UBERON:0003057,3.09e-09,12;UBERON:0000007,1.86e-08,8;UBERON:0003296,1.86e-08,8;UBERON:0010133,1.86e-08,8;UBERON:0000025,1.53e-07,114;UBERON:0002240,5.48e-07,6;UBERON:0005174,5.48e-07,6;UBERON:0001137,5.48e-07,6;UBERON:0000956,8.69e-07,21;UBERON:0001869,8.69e-07,21;UBERON:0000203,8.69e-07,21|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,6.06949382578793,5.28990979272033,5.70448263155561,0,0,0,0,0,0,0.384218305321555,4.35496371695606,3.91517221161903,5.8890989178387,5.42736870367227,5.52171352379034,5.38959516545798,4.31304619582064,3.67687514644008,7.70811166995721,8.04430229936683,8.29475279583715,7.78129097608144,7.41049913179518,4.68822033501084,8.93385596804419,9.00420176050688,4.43114918552749,4.12480019663135,3.55929201997757,7.08317894136142,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0.230615497256059,0.150722640552623,1.41106448562846,0,0.247194967734374,0,0.884610551949874,0,0,0,0,70.8529528767944,83.3597893117551,0,0,0,0,3.14560342750128,2.28750301409313,5.52879149296603,2.08589184230732,1.79000820131231,6.44142938134636,3.24482526135515,0.101839363850316,0,0.252722758433675,0.631325567659422,0.130120442962704,0,0.900310649026746,0.60281927134286,0.340182495756639,0.768682321709099,1.3118241438362,0.258703370739016,3.66465587985832,1.13463648100692,0,0,0,0,0,2.7864797354589,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.219550115291051,0.536825675041487,0.630869845692382,6.27718135513635,0,0,0.639864751605702,0.928946687441754,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,8.34863067936518,5.62616095642575,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,6.10510501201433,0,0,0,0.164970122972535,0,0.4855612723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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12404 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9R171 | |||
|association_with_transcript=-6bp_to_ENSMUST00000034076_5end | |||
|cluster_id=chr8:89996514..89996532,- | |||
|description=CAGE_peak_2_at_Cbln1_5end | |||
|id=chr8:89996514..89996532,- | |||
|ontology_enrichment_celltype=CL:0000117!1.59e-16!23;CL:0000337!1.59e-16!23;CL:0000540!5.75e-11!33;CL:0000047!5.75e-11!33;CL:0000031!5.75e-11!33;CL:0000404!5.75e-11!33;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44;CL:0002319!1.34e-07!43;CL:0000393!1.44e-07!39;CL:0000211!1.44e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-24,23;CL:0000337,1.45e-24,23;CL:0000540,1.11e-14,33;CL:0000047,1.11e-14,33;CL:0000031,1.11e-14,33;CL:0000404,1.11e-14,33;CL:0000393,2.91e-11,39;CL:0000211,2.91e-11,39;CL:0002319,1.86e-10,43;CL:0000221,4.74e-10,44;CL:0000133,4.74e-10,44;CL:0002609,7.61e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.20e-24!73;UBERON:0005743!5.20e-24!73;UBERON:0001049!2.11e-23!52;UBERON:0005068!2.11e-23!52;UBERON:0006241!2.11e-23!52;UBERON:0007135!2.11e-23!52;UBERON:0000073!1.25e-22!75;UBERON:0001016!1.25e-22!75;UBERON:0000955!1.70e-22!50;UBERON:0006238!1.70e-22!50;UBERON:0002346!8.35e-22!71;UBERON:0003075!8.35e-22!71;UBERON:0007284!8.35e-22!71;UBERON:0002616!9.42e-22!49;UBERON:0000033!1.43e-21!63;UBERON:0003056!2.33e-18!49;UBERON:0004121!2.70e-18!102;UBERON:0000924!2.70e-18!102;UBERON:0006601!2.70e-18!102;UBERON:0003080!5.25e-18!40;UBERON:0002780!1.82e-17!39;UBERON:0001890!1.82e-17!39;UBERON:0006240!1.82e-17!39;UBERON:0002020!1.46e-14!34;UBERON:0002791!1.67e-11!29;UBERON:0003528!1.67e-11!29;UBERON:0001893!1.67e-11!29;UBERON:0007811!3.93e-11!86;UBERON:0000153!9.05e-10!94;UBERON:0001894!3.18e-07!10;UBERON:0006222!3.18e-07!10;UBERON:0002420!9.75e-07!8;UBERON:0007245!9.75e-07!8;UBERON:0010009!9.75e-07!8;UBERON:0010011!9.75e-07!8;UBERON:0000454!9.75e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.78e-35,54;UBERON:0001049,3.63e-32,52;UBERON:0005068,3.63e-32,52;UBERON:0006241,3.63e-32,52;UBERON:0007135,3.63e-32,52;UBERON:0001017,7.75e-31,73;UBERON:0001016,1.43e-29,75;UBERON:0000955,2.88e-27,47;UBERON:0006238,2.88e-27,47;UBERON:0002616,3.50e-26,46;UBERON:0002346,1.15e-24,64;UBERON:0003075,1.15e-24,64;UBERON:0007284,1.15e-24,64;UBERON:0003080,3.33e-23,40;UBERON:0002780,2.15e-22,39;UBERON:0001890,2.15e-22,39;UBERON:0006240,2.15e-22,39;UBERON:0004121,7.24e-21,95;UBERON:0000924,7.24e-21,95;UBERON:0006601,7.24e-21,95;UBERON:0010371,7.03e-20,73;UBERON:0003056,4.19e-18,49;UBERON:0002020,4.38e-18,34;UBERON:0010314,9.11e-14,92;UBERON:0003528,1.29e-13,29;UBERON:0002791,1.29e-13,29;UBERON:0001893,1.29e-13,29;UBERON:0001894,2.88e-10,10;UBERON:0006222,2.88e-10,10;UBERON:0002420,1.59e-09,8;UBERON:0007245,1.59e-09,8;UBERON:0010009,1.59e-09,8;UBERON:0010011,1.59e-09,8;UBERON:0000454,1.59e-09,8;UBERON:0003076,3.09e-09,12;UBERON:0003057,3.09e-09,12;UBERON:0000007,1.86e-08,8;UBERON:0003296,1.86e-08,8;UBERON:0010133,1.86e-08,8;UBERON:0000025,1.53e-07,114;UBERON:0002240,5.48e-07,6;UBERON:0005174,5.48e-07,6;UBERON:0001137,5.48e-07,6;UBERON:0000956,8.69e-07,21;UBERON:0001869,8.69e-07,21;UBERON:0000203,8.69e-07,21 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,6.06949382578793,5.28990979272033,5.70448263155561,0,0,0,0,0,0,0.384218305321555,4.35496371695606,3.91517221161903,5.8890989178387,5.42736870367227,5.52171352379034,5.38959516545798,4.31304619582064,3.67687514644008,7.70811166995721,8.04430229936683,8.29475279583715,7.78129097608144,7.41049913179518,4.68822033501084,8.93385596804419,9.00420176050688,4.43114918552749,4.12480019663135,3.55929201997757,7.08317894136142,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0.693941307064543,0,0.230615497256059,0.150722640552623,1.41106448562846,0,0.247194967734374,0,0.884610551949874,0,0,0,0,70.8529528767944,83.3597893117551,0,0,0,0,3.14560342750128,2.28750301409313,5.52879149296603,2.08589184230732,1.79000820131231,6.44142938134636,3.24482526135515,0.101839363850316,0,0.252722758433675,0.631325567659422,0.130120442962704,0,0.900310649026746,0.60281927134286,0.340182495756639,0.768682321709099,1.3118241438362,0.258703370739016,3.66465587985832,1.13463648100692,0,0,0,0,0,2.7864797354589,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.219550115291051,0.536825675041487,0.630869845692382,6.27718135513635,0,0,0.639864751605702,0.928946687441754,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,8.34863067936518,5.62616095642575,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,6.10510501201433,0,0,0,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,3.42116078659489,5.56242340265844,3.85806663056866,7.98031051390231,4.63758925765383,3.1264313914403,3.95804433848979,0.23467170806371,0.42366414172764,0,0,0,0,0,0,0,4.07935664423121,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0.129614973291793,0,0.56369293868419,10.6156747691225,13.8985131983962,11.8615224889869,16.6616172286273,21.1195156863473,23.354090490505,5.07797100891405,1.67774951081137,0.241584120826006,0.288030006257865,0,0,0,0,0.358053391334963,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0.448569283047378,0.167884616364078,0,0,0,0.643105137237198,0,2.25900737046827,0.920650473014354,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,0,1.35096360967266,0.453142408984205,1.03552062350364,0.93408612825759,0.798049746802062,2.04880326904961,0.972426868273176,1.25767897576789,0.551530525350042,1.77797382241292,1.44224540067226,0.64183841918363,1.01078884705519,1.2673964994512,1.32038438970253,1.49826411951812,0.832326981263301,0.804096565378586,0,0.927074607558844,0.192909220463705,1.64834360321323,1.32479028120958,0.685738504770831,0.70990322463735,1.1921809497366,0.872078499793971,1.31753132581463,0.930760686808441,1.46342378298218,1.31534855718921,0.950628796921032,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,1.08455788830176,0.385813221962283,2.24829520144151,1.16965804222704,1.28922632428979,0.57386499620653,0,0.231867835620421 | |||
|short_description=p2@Cbln1 | |||
}} |
Revision as of 07:24, 4 August 2015
Short description: | p2@Cbln1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cbln1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -6bp_to_ENSMUST00000034076_5end |
EntrezGene: | 12404 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.45e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.45e-24 | 23 |
neuron | 1.11e-14 | 33 |
neuronal stem cell | 1.11e-14 | 33 |
neuroblast | 1.11e-14 | 33 |
electrically signaling cell | 1.11e-14 | 33 |
electrically responsive cell | 2.91e-11 | 39 |
electrically active cell | 2.91e-11 | 39 |
neural cell | 1.86e-10 | 43 |
ectodermal cell | 4.74e-10 | 44 |
neurectodermal cell | 4.74e-10 | 44 |
neuron of cerebral cortex | 7.61e-07 | 6 |