FFCP PHASE1:Mm9::chr4:101169150..101169203,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=72685|HGNC=|MCL_coexpression_id=803|UniProt=Q80TZ3|association_with_transcript=-49bp_to_ENSMUST00000106930,NM_198412,uc008tvq.2_5end|description=CAGE_peak_4_at_Dnajc6_5end|id=chr4:101169150..101169203,+|ontology_enrichment_celltype=CL:0000117!2.13e-08!23;CL:0000337!2.13e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-14,23;CL:0000337,2.50e-14,23;CL:0000540,1.96e-08,33;CL:0000047,1.96e-08,33;CL:0000031,1.96e-08,33;CL:0000404,1.96e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.40e-15!52;UBERON:0005068!2.40e-15!52;UBERON:0006241!2.40e-15!52;UBERON:0007135!2.40e-15!52;UBERON:0004121!3.37e-15!102;UBERON:0000924!3.37e-15!102;UBERON:0006601!3.37e-15!102;UBERON:0000033!1.51e-14!63;UBERON:0001017!3.74e-14!73;UBERON:0005743!3.74e-14!73;UBERON:0007811!4.94e-14!86;UBERON:0000955!1.06e-13!50;UBERON:0006238!1.06e-13!50;UBERON:0002346!1.28e-13!71;UBERON:0003075!1.28e-13!71;UBERON:0007284!1.28e-13!71;UBERON:0000073!3.18e-13!75;UBERON:0001016!3.18e-13!75;UBERON:0002616!4.38e-13!49;UBERON:0002020!8.36e-13!34;UBERON:0000153!8.80e-13!94;UBERON:0003056!8.70e-11!49;UBERON:0003080!4.15e-10!40;UBERON:0002780!1.82e-09!39;UBERON:0001890!1.82e-09!39;UBERON:0006240!1.82e-09!39;UBERON:0002791!3.67e-09!29;UBERON:0003528!3.67e-09!29;UBERON:0001893!3.67e-09!29;UBERON:0002021!1.52e-08!10;UBERON:0000411!1.52e-08!10;UBERON:0001950!1.52e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.94e-28,54;UBERON:0001049,2.13e-25,52;UBERON:0005068,2.13e-25,52;UBERON:0006241,2.13e-25,52;UBERON:0007135,2.13e-25,52;UBERON:0001017,2.68e-24,73;UBERON:0001016,2.68e-23,75;UBERON:0002020,9.88e-23,34;UBERON:0002346,6.64e-21,64;UBERON:0003075,6.64e-21,64;UBERON:0007284,6.64e-21,64;UBERON:0004121,6.94e-21,95;UBERON:0000924,6.94e-21,95;UBERON:0006601,6.94e-21,95;UBERON:0010371,1.57e-20,73;UBERON:0000955,2.37e-19,47;UBERON:0006238,2.37e-19,47;UBERON:0002616,2.39e-18,46;UBERON:0003528,2.43e-16,29;UBERON:0002791,2.43e-16,29;UBERON:0001893,2.43e-16,29;UBERON:0003080,8.84e-16,40;UBERON:0002780,1.06e-14,39;UBERON:0001890,1.06e-14,39;UBERON:0006240,1.06e-14,39;UBERON:0003056,1.55e-13,49;UBERON:0002021,2.31e-13,10;UBERON:0000411,2.31e-13,10;UBERON:0001950,2.31e-13,10;UBERON:0010314,7.24e-12,92;UBERON:0003076,8.40e-11,12;UBERON:0003057,8.40e-11,12;UBERON:0002619,6.75e-10,17;UBERON:0002420,1.01e-09,8;UBERON:0007245,1.01e-09,8;UBERON:0010009,1.01e-09,8;UBERON:0010011,1.01e-09,8;UBERON:0000454,1.01e-09,8;UBERON:0002240,1.98e-09,6;UBERON:0005174,1.98e-09,6;UBERON:0001137,1.98e-09,6;UBERON:0000956,7.38e-09,21;UBERON:0001869,7.38e-09,21;UBERON:0000203,7.38e-09,21;UBERON:0001948,1.87e-08,5;UBERON:0002315,1.87e-08,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,0,0,0,23.9946826899195,18.9946945218388,0,0.191690942036473,0,4.40463523997555,9.95961237064464,9.06278546211836,3.56092976871523,4.94033275453012,1.04182674111352,6.14202597803038,14.069065250792,14.8214300343506,29.1682299618931,29.8980529678116,7.45597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.593768556259299,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,2.93225389538837,0.255457055208591,0,0,0,10.6351353977424,5.94750783664214,1.63350657746724,7.12679712788333,9.46147192122223,9.14267396062064,7.30085683804909,0.305518091550949,0,0.758168275301024,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.544291993210623,1.0249097622788,0.562210347358373,1.81092359517311,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,14.2997165023607,1.54356918568927,0.330418782983798,0,0,0,0.128867461322093,0,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,6.88469982226651,2.20749397043786,7.06422595946285,6.79827782234778,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,6.42642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,3.06395645178409,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0.65954501176592,0.322928853391811,0.241251699712623,0.358117032009409,0.656563598980245,0,4.82105785227325,0.341741761595705,0,0,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0.948033361884535,1.01362607645082,1.33524244314275,0.77952493786677,0.716106782669926,0.596044064343795,0.480781798079875,0.590758108698309,0.100966449948148,0.304827226619999,0.806609481094724,0.194915761479505,0.384847366561318,0.350630706544707,0.226730383615211,0,0,0,0.579568782096571,0,0,0.428736758158132,0,11.8597886949584,11.9684561491866,5.72895513439397,7.56154002312225,6.85082519770642,5.2877572817279,9.45031500324528,4.95353323546643,6.79713613476307,9.31968561153276,0,0.798049746802062,0.170733605754134,0.243106717068294,0.419226325255965,1.83843508450014,1.33348036680969,1.44224540067226,0.64183841918363,0.505394423527595,2.02783439912192,1.13175804831646,1.21733959710847,1.15245274328765,1.26358031702349,0.476293691283074,1.62238056322798,0.964546102318525,0,1.32479028120958,0.685738504770831,1.06485483695602,1.43061713968393,1.45346416632329,1.88218760830661,1.35383372626682,2.0122077016005,0.789209134313529,1.22223702461276,0.561142271657738,2.25406534435931,0.985044823755635,1.22769312950907,1.08455788830176,0.385813221962283,2.24829520144151,1.16965804222704,0.859484216193193,1.3390183244819,0.661774257358546,0.927471342481686|short_description=p4@Dnajc6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72685 | |||
|HGNC= | |||
|MCL_coexpression_id=803 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80TZ3 | |||
|association_with_transcript=-49bp_to_ENSMUST00000106930,NM_198412,uc008tvq.2_5end | |||
|cluster_id=chr4:101169150..101169203,+ | |||
|description=CAGE_peak_4_at_Dnajc6_5end | |||
|id=chr4:101169150..101169203,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.13e-08!23;CL:0000337!2.13e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-14,23;CL:0000337,2.50e-14,23;CL:0000540,1.96e-08,33;CL:0000047,1.96e-08,33;CL:0000031,1.96e-08,33;CL:0000404,1.96e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.40e-15!52;UBERON:0005068!2.40e-15!52;UBERON:0006241!2.40e-15!52;UBERON:0007135!2.40e-15!52;UBERON:0004121!3.37e-15!102;UBERON:0000924!3.37e-15!102;UBERON:0006601!3.37e-15!102;UBERON:0000033!1.51e-14!63;UBERON:0001017!3.74e-14!73;UBERON:0005743!3.74e-14!73;UBERON:0007811!4.94e-14!86;UBERON:0000955!1.06e-13!50;UBERON:0006238!1.06e-13!50;UBERON:0002346!1.28e-13!71;UBERON:0003075!1.28e-13!71;UBERON:0007284!1.28e-13!71;UBERON:0000073!3.18e-13!75;UBERON:0001016!3.18e-13!75;UBERON:0002616!4.38e-13!49;UBERON:0002020!8.36e-13!34;UBERON:0000153!8.80e-13!94;UBERON:0003056!8.70e-11!49;UBERON:0003080!4.15e-10!40;UBERON:0002780!1.82e-09!39;UBERON:0001890!1.82e-09!39;UBERON:0006240!1.82e-09!39;UBERON:0002791!3.67e-09!29;UBERON:0003528!3.67e-09!29;UBERON:0001893!3.67e-09!29;UBERON:0002021!1.52e-08!10;UBERON:0000411!1.52e-08!10;UBERON:0001950!1.52e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.94e-28,54;UBERON:0001049,2.13e-25,52;UBERON:0005068,2.13e-25,52;UBERON:0006241,2.13e-25,52;UBERON:0007135,2.13e-25,52;UBERON:0001017,2.68e-24,73;UBERON:0001016,2.68e-23,75;UBERON:0002020,9.88e-23,34;UBERON:0002346,6.64e-21,64;UBERON:0003075,6.64e-21,64;UBERON:0007284,6.64e-21,64;UBERON:0004121,6.94e-21,95;UBERON:0000924,6.94e-21,95;UBERON:0006601,6.94e-21,95;UBERON:0010371,1.57e-20,73;UBERON:0000955,2.37e-19,47;UBERON:0006238,2.37e-19,47;UBERON:0002616,2.39e-18,46;UBERON:0003528,2.43e-16,29;UBERON:0002791,2.43e-16,29;UBERON:0001893,2.43e-16,29;UBERON:0003080,8.84e-16,40;UBERON:0002780,1.06e-14,39;UBERON:0001890,1.06e-14,39;UBERON:0006240,1.06e-14,39;UBERON:0003056,1.55e-13,49;UBERON:0002021,2.31e-13,10;UBERON:0000411,2.31e-13,10;UBERON:0001950,2.31e-13,10;UBERON:0010314,7.24e-12,92;UBERON:0003076,8.40e-11,12;UBERON:0003057,8.40e-11,12;UBERON:0002619,6.75e-10,17;UBERON:0002420,1.01e-09,8;UBERON:0007245,1.01e-09,8;UBERON:0010009,1.01e-09,8;UBERON:0010011,1.01e-09,8;UBERON:0000454,1.01e-09,8;UBERON:0002240,1.98e-09,6;UBERON:0005174,1.98e-09,6;UBERON:0001137,1.98e-09,6;UBERON:0000956,7.38e-09,21;UBERON:0001869,7.38e-09,21;UBERON:0000203,7.38e-09,21;UBERON:0001948,1.87e-08,5;UBERON:0002315,1.87e-08,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,5.28990979272033,3.1691570175309,0,0,0,0,0,0,0,0,0,0,23.9946826899195,18.9946945218388,0,0.191690942036473,0,4.40463523997555,9.95961237064464,9.06278546211836,3.56092976871523,4.94033275453012,1.04182674111352,6.14202597803038,14.069065250792,14.8214300343506,29.1682299618931,29.8980529678116,7.45597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0.593768556259299,0,0,0.461230994512117,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,2.93225389538837,0.255457055208591,0,0,0,10.6351353977424,5.94750783664214,1.63350657746724,7.12679712788333,9.46147192122223,9.14267396062064,7.30085683804909,0.305518091550949,0,0.758168275301024,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.544291993210623,1.0249097622788,0.562210347358373,1.81092359517311,0.215567992932842,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,14.2997165023607,1.54356918568927,0.330418782983798,0,0,0,0.128867461322093,0,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,6.88469982226651,2.20749397043786,7.06422595946285,6.79827782234778,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,6.42642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,3.06395645178409,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0.65954501176592,0.322928853391811,0.241251699712623,0.358117032009409,0.656563598980245,0,4.82105785227325,0.341741761595705,0,0,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0.13020438484395,0,0,0,0.948033361884535,1.01362607645082,1.33524244314275,0.77952493786677,0.716106782669926,0.596044064343795,0.480781798079875,0.590758108698309,0.100966449948148,0.304827226619999,0.806609481094724,0.194915761479505,0.384847366561318,0.350630706544707,0.226730383615211,0,0,0,0.579568782096571,0,0,0.428736758158132,0,11.8597886949584,11.9684561491866,5.72895513439397,7.56154002312225,6.85082519770642,5.2877572817279,9.45031500324528,4.95353323546643,6.79713613476307,9.31968561153276,0,0.798049746802062,0.170733605754134,0.243106717068294,0.419226325255965,1.83843508450014,1.33348036680969,1.44224540067226,0.64183841918363,0.505394423527595,2.02783439912192,1.13175804831646,1.21733959710847,1.15245274328765,1.26358031702349,0.476293691283074,1.62238056322798,0.964546102318525,0,1.32479028120958,0.685738504770831,1.06485483695602,1.43061713968393,1.45346416632329,1.88218760830661,1.35383372626682,2.0122077016005,0.789209134313529,1.22223702461276,0.561142271657738,2.25406534435931,0.985044823755635,1.22769312950907,1.08455788830176,0.385813221962283,2.24829520144151,1.16965804222704,0.859484216193193,1.3390183244819,0.661774257358546,0.927471342481686 | |||
|short_description=p4@Dnajc6 | |||
}} |
Revision as of 10:46, 4 August 2015
Short description: | p4@Dnajc6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dnajc6_5end |
Coexpression cluster: | MCL_coexpression_mm9:803 |
Association with transcript: | -49bp_to_ENSMUST00000106930, NM_198412, uc008tvq.2_5end |
EntrezGene: | 72685 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.50e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-14 | 23 |
neuron | 1.96e-08 | 33 |
neuronal stem cell | 1.96e-08 | 33 |
neuroblast | 1.96e-08 | 33 |
electrically signaling cell | 1.96e-08 | 33 |