FFCP PHASE1:Mm9::chr10:57505309..57505327,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr10:57505309..57505327,+ to FFCP PHASE1:Mm9::chr10:57505309..57505327,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1518 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:57505309..57505327,+ | |||
|description=CAGE_peak_at_chr10:57505309..57505327,+ | |||
|id=chr10:57505309..57505327,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.03e-30!44;CL:0000133!1.03e-30!44;CL:0002319!1.62e-29!43;CL:0000540!1.33e-26!33;CL:0000047!1.33e-26!33;CL:0000031!1.33e-26!33;CL:0000404!1.33e-26!33;CL:0000055!9.92e-24!50;CL:0000117!6.65e-23!23;CL:0000337!6.65e-23!23;CL:0000393!5.30e-21!39;CL:0000211!5.30e-21!39;CL:0002321!6.39e-15!70;CL:0000220!6.39e-15!70;CL:0002609!3.41e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.92e-32,23;CL:0000337,4.92e-32,23;CL:0002319,1.89e-27,43;CL:0000221,8.47e-27,44;CL:0000133,8.47e-27,44;CL:0000540,3.33e-26,33;CL:0000047,3.33e-26,33;CL:0000031,3.33e-26,33;CL:0000404,3.33e-26,33;CL:0000393,5.44e-22,39;CL:0000211,5.44e-22,39;CL:0002612,4.00e-20,3;CL:0002321,2.31e-16,70;CL:0002611,7.05e-14,2;CL:0000723,2.32e-10,91;CL:0000048,2.32e-10,91;CL:0000034,1.25e-09,97;CL:0002613,5.12e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.79e-24!73;UBERON:0005743!4.79e-24!73;UBERON:0000073!4.99e-23!75;UBERON:0001016!4.99e-23!75;UBERON:0004121!5.96e-18!102;UBERON:0000924!5.96e-18!102;UBERON:0006601!5.96e-18!102;UBERON:0002020!2.24e-17!34;UBERON:0001049!1.21e-13!52;UBERON:0005068!1.21e-13!52;UBERON:0006241!1.21e-13!52;UBERON:0007135!1.21e-13!52;UBERON:0002346!1.31e-12!71;UBERON:0003075!1.31e-12!71;UBERON:0007284!1.31e-12!71;UBERON:0002791!8.28e-12!29;UBERON:0003528!8.28e-12!29;UBERON:0001893!8.28e-12!29;UBERON:0000033!7.03e-11!63;UBERON:0002780!4.37e-10!39;UBERON:0001890!4.37e-10!39;UBERON:0006240!4.37e-10!39;UBERON:0003056!4.51e-10!49;UBERON:0002616!8.74e-10!49;UBERON:0003080!1.13e-09!40;UBERON:0000955!1.92e-09!50;UBERON:0006238!1.92e-09!50;UBERON:0002240!1.47e-08!6;UBERON:0005174!1.47e-08!6;UBERON:0001137!1.47e-08!6;UBERON:0001948!4.25e-08!5;UBERON:0002315!4.25e-08!5;UBERON:0000956!1.04e-07!21;UBERON:0001869!1.04e-07!21;UBERON:0000203!1.04e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.50e-32,5;UBERON:0002315,2.50e-32,5;UBERON:0002240,5.82e-27,6;UBERON:0005174,5.82e-27,6;UBERON:0001137,5.82e-27,6;UBERON:0002257,4.00e-20,3;UBERON:0003076,3.41e-19,12;UBERON:0003057,3.41e-19,12;UBERON:0002020,1.41e-17,34;UBERON:0001017,1.24e-15,73;UBERON:0001016,3.51e-15,75;UBERON:0002256,7.05e-14,2;UBERON:0001049,1.32e-13,52;UBERON:0005068,1.32e-13,52;UBERON:0006241,1.32e-13,52;UBERON:0007135,1.32e-13,52;UBERON:0000073,4.69e-13,54;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002346,8.07e-11,64;UBERON:0003075,8.07e-11,64;UBERON:0007284,8.07e-11,64;UBERON:0010371,2.51e-09,73;UBERON:0000489,1.12e-07,21;UBERON:0002420,1.74e-07,8;UBERON:0007245,1.74e-07,8;UBERON:0010009,1.74e-07,8;UBERON:0010011,1.74e-07,8;UBERON:0000454,1.74e-07,8;UBERON:0010314,4.02e-07,92 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36050312760893,0.659058548203415,0.777719596297134,0.419959264876088,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0.7104801149461,1.79760066311043,0.768436610643109,0.933206510776299,4.86021377994086,0.420649922702764,3.99911378165325,3.75476519617743,0.61245399607477,1.0543001812006,0.919218786610021,0,0.638436690425939,0.768032666281217,0.395658863190582,1.46380229763855,1.04182674111352,1.67509799400829,0,0.916789486660861,7.95497180778903,14.6642831223076,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,0,0.205809224758569,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.646270193198397,0.477937595905104,0.445597348164788,0,0.404810701674894,1.16902343164525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.68741272937475,0,0,0,0,0,0.51776031175182,0.830298780673413,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36050312760893,0.659058548203415,0.777719596297134,0.419959264876088,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,0.633831403506179,0,0,0,0,0.7104801149461,1.79760066311043,0.768436610643109,0.933206510776299,4.86021377994086,0.420649922702764,3.99911378165325,3.75476519617743,0.61245399607477,1.0543001812006,0.919218786610021,0,0.638436690425939,0.768032666281217,0.395658863190582,1.46380229763855,1.04182674111352,1.67509799400829,0,0.916789486660861,7.95497180778903,14.6642831223076,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,0,0.205809224758569,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.646270193198397,0.477937595905104,0.445597348164788,0,0.404810701674894,1.16902343164525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.68741272937475,0,0,0,0,0,0.51776031175182,0.830298780673413,0,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr10:57505309..57505327,+ | |||
}} | }} |
Latest revision as of 11:48, 4 August 2015
Short description: | p@chr10:57505309..57505327, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:57505309..57505327, + |
Coexpression cluster: | MCL_coexpression_mm9:1518 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.92e-32 | 23 |
neuroblast (sensu Vertebrata) | 4.92e-32 | 23 |
neural cell | 1.89e-27 | 43 |
ectodermal cell | 8.47e-27 | 44 |
neurectodermal cell | 8.47e-27 | 44 |
neuron | 3.33e-26 | 33 |
neuronal stem cell | 3.33e-26 | 33 |
neuroblast | 3.33e-26 | 33 |
electrically signaling cell | 3.33e-26 | 33 |
electrically responsive cell | 5.44e-22 | 39 |
electrically active cell | 5.44e-22 | 39 |
neuron of the ventral spinal cord | 4.00e-20 | 3 |
embryonic cell | 2.31e-16 | 70 |
neuron of the dorsal spinal cord | 7.05e-14 | 2 |
somatic stem cell | 2.32e-10 | 91 |
multi fate stem cell | 2.32e-10 | 91 |
stem cell | 1.25e-09 | 97 |
striatum neuron | 5.12e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 2.50e-32 | 5 |
gray matter of spinal cord | 2.50e-32 | 5 |
spinal cord | 5.82e-27 | 6 |
dorsal region element | 5.82e-27 | 6 |
dorsum | 5.82e-27 | 6 |
ventral horn of spinal cord | 4.00e-20 | 3 |
posterior neural tube | 3.41e-19 | 12 |
chordal neural plate | 3.41e-19 | 12 |
gray matter | 1.41e-17 | 34 |
central nervous system | 1.24e-15 | 73 |
nervous system | 3.51e-15 | 75 |
dorsal horn of spinal cord | 7.05e-14 | 2 |
neural tube | 1.32e-13 | 52 |
neural rod | 1.32e-13 | 52 |
future spinal cord | 1.32e-13 | 52 |
neural keel | 1.32e-13 | 52 |
regional part of nervous system | 4.69e-13 | 54 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
neurectoderm | 8.07e-11 | 64 |
neural plate | 8.07e-11 | 64 |
presumptive neural plate | 8.07e-11 | 64 |
ecto-epithelium | 2.51e-09 | 73 |
cavitated compound organ | 1.12e-07 | 21 |
basal ganglion | 1.74e-07 | 8 |
nuclear complex of neuraxis | 1.74e-07 | 8 |
aggregate regional part of brain | 1.74e-07 | 8 |
collection of basal ganglia | 1.74e-07 | 8 |
cerebral subcortex | 1.74e-07 | 8 |
structure with developmental contribution from neural crest | 4.02e-07 | 92 |