FFCP PHASE1:Mm9::chr6:104443043..104443105,+: Difference between revisions
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{{FFCP|EntrezGene=53870|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=0bp_to_ENSMUST00000161413_5end|description=CAGE_peak_2_at_Cntn6_5end|id=chr6:104443043..104443105,+|ontology_enrichment_celltype=CL:0000540!5.80e-12!33;CL:0000047!5.80e-12!33;CL:0000031!5.80e-12!33;CL:0000404!5.80e-12!33;CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23;CL:0000393!2.98e-08!39;CL:0000211!2.98e-08!39;CL:0002319!5.36e-08!43;CL:0000221!1.51e-07!44;CL:0000133!1.51e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,5.28e-11,33;CL:0000047,5.28e-11,33;CL:0000031,5.28e-11,33;CL:0000404,5.28e-11,33;CL:0000117,3.90e-10,23;CL:0000337,3.90e-10,23;CL:0000393,2.11e-08,39;CL:0000211,2.11e-08,39;CL:0002319,4.23e-07,43;CL:0000221,8.14e-07,44;CL:0000133,8.14e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.01e-26!73;UBERON:0005743!3.01e-26!73;UBERON:0000073!9.55e-25!75;UBERON:0001016!9.55e-25!75;UBERON:0002346!7.99e-22!71;UBERON:0003075!7.99e-22!71;UBERON:0007284!7.99e-22!71;UBERON:0004121!6.06e-20!102;UBERON:0000924!6.06e-20!102;UBERON:0006601!6.06e-20!102;UBERON:0001049!1.16e-19!52;UBERON:0005068!1.16e-19!52;UBERON:0006241!1.16e-19!52;UBERON:0007135!1.16e-19!52;UBERON:0000033!2.31e-19!63;UBERON:0000955!3.38e-18!50;UBERON:0006238!3.38e-18!50;UBERON:0002616!1.38e-17!49;UBERON:0003056!1.59e-16!49;UBERON:0002020!2.54e-14!34;UBERON:0003080!1.51e-13!40;UBERON:0002780!7.43e-13!39;UBERON:0001890!7.43e-13!39;UBERON:0006240!7.43e-13!39;UBERON:0002791!3.94e-11!29;UBERON:0003528!3.94e-11!29;UBERON:0001893!3.94e-11!29;UBERON:0002021!3.35e-09!10;UBERON:0000411!3.35e-09!10;UBERON:0001950!3.35e-09!10;UBERON:0007811!3.57e-09!86;UBERON:0000153!1.99e-07!94;UBERON:0002619!3.89e-07!17;UBERON:0003076!4.93e-07!12;UBERON:0003057!4.93e-07!12;UBERON:0000956!5.58e-07!21;UBERON:0001869!5.58e-07!21;UBERON:0000203!5.58e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-26,73;UBERON:0001016,2.14e-25,75;UBERON:0000073,1.27e-24,54;UBERON:0002346,1.85e-24,64;UBERON:0003075,1.85e-24,64;UBERON:0007284,1.85e-24,64;UBERON:0001049,1.26e-22,52;UBERON:0005068,1.26e-22,52;UBERON:0006241,1.26e-22,52;UBERON:0007135,1.26e-22,52;UBERON:0004121,5.26e-22,95;UBERON:0000924,5.26e-22,95;UBERON:0006601,5.26e-22,95;UBERON:0002020,4.81e-21,34;UBERON:0010371,7.90e-20,73;UBERON:0000955,1.55e-17,47;UBERON:0006238,1.55e-17,47;UBERON:0002616,1.15e-16,46;UBERON:0003528,7.66e-16,29;UBERON:0002791,7.66e-16,29;UBERON:0001893,7.66e-16,29;UBERON:0003056,9.76e-15,49;UBERON:0002021,2.61e-14,10;UBERON:0000411,2.61e-14,10;UBERON:0001950,2.61e-14,10;UBERON:0003080,1.09e-13,40;UBERON:0010314,3.93e-13,92;UBERON:0002780,1.02e-12,39;UBERON:0001890,1.02e-12,39;UBERON:0006240,1.02e-12,39;UBERON:0003076,2.26e-10,12;UBERON:0003057,2.26e-10,12;UBERON:0002619,2.80e-10,17;UBERON:0000956,3.75e-09,21;UBERON:0001869,3.75e-09,21;UBERON:0000203,3.75e-09,21;UBERON:0002420,1.40e-08,8;UBERON:0007245,1.40e-08,8;UBERON:0010009,1.40e-08,8;UBERON:0010011,1.40e-08,8;UBERON:0000454,1.40e-08,8;UBERON:0002240,4.80e-08,6;UBERON:0005174,4.80e-08,6;UBERON:0001137,4.80e-08,6;UBERON:0001948,7.15e-07,5;UBERON:0002315,7.15e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.270011876663381,0,3.42781181284564,4.19650227808066,0.489963196859816,0.287536413054709,0,5.50579404996943,5.87361755191863,6.91229399653096,2.1101806036831,1.55528994124096,1.04182674111352,3.62937898701795,4.50210088025344,6.1119299110724,10.3120004915784,12.8134512719193,3.16879057903011,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0.722996784599558,0,0.161766849947409,0,0,0,54.1644474471362,42.5176814831314,0.255457055208591,0,0,0,10.9347166765521,5.94750783664214,2.01046963380583,9.73416193076748,7.92717917724025,6.44142938134636,7.46309810111685,1.2220723662038,0,0,0.841767423545896,1.17108398666433,0.229902104433473,1.26043490863744,0.90422890701429,0.612328492361951,1.15302348256365,1.12442069471675,1.81092359517311,0,0,0.175951124163949,0,0,0,0.205782136407943,1.19420560091096,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,2.52347938276953,4.01327988279209,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,1.02823661348756,0,0.407302655690628,0.387904974335251,0.140271639780637,0.442655759869801,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0,7.38532713943843,8.32202974804643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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53870 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000161413_5end | |||
|cluster_id=chr6:104443043..104443105,+ | |||
|description=CAGE_peak_2_at_Cntn6_5end | |||
|id=chr6:104443043..104443105,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.80e-12!33;CL:0000047!5.80e-12!33;CL:0000031!5.80e-12!33;CL:0000404!5.80e-12!33;CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23;CL:0000393!2.98e-08!39;CL:0000211!2.98e-08!39;CL:0002319!5.36e-08!43;CL:0000221!1.51e-07!44;CL:0000133!1.51e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.28e-11,33;CL:0000047,5.28e-11,33;CL:0000031,5.28e-11,33;CL:0000404,5.28e-11,33;CL:0000117,3.90e-10,23;CL:0000337,3.90e-10,23;CL:0000393,2.11e-08,39;CL:0000211,2.11e-08,39;CL:0002319,4.23e-07,43;CL:0000221,8.14e-07,44;CL:0000133,8.14e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.01e-26!73;UBERON:0005743!3.01e-26!73;UBERON:0000073!9.55e-25!75;UBERON:0001016!9.55e-25!75;UBERON:0002346!7.99e-22!71;UBERON:0003075!7.99e-22!71;UBERON:0007284!7.99e-22!71;UBERON:0004121!6.06e-20!102;UBERON:0000924!6.06e-20!102;UBERON:0006601!6.06e-20!102;UBERON:0001049!1.16e-19!52;UBERON:0005068!1.16e-19!52;UBERON:0006241!1.16e-19!52;UBERON:0007135!1.16e-19!52;UBERON:0000033!2.31e-19!63;UBERON:0000955!3.38e-18!50;UBERON:0006238!3.38e-18!50;UBERON:0002616!1.38e-17!49;UBERON:0003056!1.59e-16!49;UBERON:0002020!2.54e-14!34;UBERON:0003080!1.51e-13!40;UBERON:0002780!7.43e-13!39;UBERON:0001890!7.43e-13!39;UBERON:0006240!7.43e-13!39;UBERON:0002791!3.94e-11!29;UBERON:0003528!3.94e-11!29;UBERON:0001893!3.94e-11!29;UBERON:0002021!3.35e-09!10;UBERON:0000411!3.35e-09!10;UBERON:0001950!3.35e-09!10;UBERON:0007811!3.57e-09!86;UBERON:0000153!1.99e-07!94;UBERON:0002619!3.89e-07!17;UBERON:0003076!4.93e-07!12;UBERON:0003057!4.93e-07!12;UBERON:0000956!5.58e-07!21;UBERON:0001869!5.58e-07!21;UBERON:0000203!5.58e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.73e-26,73;UBERON:0001016,2.14e-25,75;UBERON:0000073,1.27e-24,54;UBERON:0002346,1.85e-24,64;UBERON:0003075,1.85e-24,64;UBERON:0007284,1.85e-24,64;UBERON:0001049,1.26e-22,52;UBERON:0005068,1.26e-22,52;UBERON:0006241,1.26e-22,52;UBERON:0007135,1.26e-22,52;UBERON:0004121,5.26e-22,95;UBERON:0000924,5.26e-22,95;UBERON:0006601,5.26e-22,95;UBERON:0002020,4.81e-21,34;UBERON:0010371,7.90e-20,73;UBERON:0000955,1.55e-17,47;UBERON:0006238,1.55e-17,47;UBERON:0002616,1.15e-16,46;UBERON:0003528,7.66e-16,29;UBERON:0002791,7.66e-16,29;UBERON:0001893,7.66e-16,29;UBERON:0003056,9.76e-15,49;UBERON:0002021,2.61e-14,10;UBERON:0000411,2.61e-14,10;UBERON:0001950,2.61e-14,10;UBERON:0003080,1.09e-13,40;UBERON:0010314,3.93e-13,92;UBERON:0002780,1.02e-12,39;UBERON:0001890,1.02e-12,39;UBERON:0006240,1.02e-12,39;UBERON:0003076,2.26e-10,12;UBERON:0003057,2.26e-10,12;UBERON:0002619,2.80e-10,17;UBERON:0000956,3.75e-09,21;UBERON:0001869,3.75e-09,21;UBERON:0000203,3.75e-09,21;UBERON:0002420,1.40e-08,8;UBERON:0007245,1.40e-08,8;UBERON:0010009,1.40e-08,8;UBERON:0010011,1.40e-08,8;UBERON:0000454,1.40e-08,8;UBERON:0002240,4.80e-08,6;UBERON:0005174,4.80e-08,6;UBERON:0001137,4.80e-08,6;UBERON:0001948,7.15e-07,5;UBERON:0002315,7.15e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.270011876663381,0,3.42781181284564,4.19650227808066,0.489963196859816,0.287536413054709,0,5.50579404996943,5.87361755191863,6.91229399653096,2.1101806036831,1.55528994124096,1.04182674111352,3.62937898701795,4.50210088025344,6.1119299110724,10.3120004915784,12.8134512719193,3.16879057903011,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0.722996784599558,0,0.161766849947409,0,0,0,54.1644474471362,42.5176814831314,0.255457055208591,0,0,0,10.9347166765521,5.94750783664214,2.01046963380583,9.73416193076748,7.92717917724025,6.44142938134636,7.46309810111685,1.2220723662038,0,0,0.841767423545896,1.17108398666433,0.229902104433473,1.26043490863744,0.90422890701429,0.612328492361951,1.15302348256365,1.12442069471675,1.81092359517311,0,0,0.175951124163949,0,0,0,0.205782136407943,1.19420560091096,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,2.52347938276953,4.01327988279209,0,0,1.06644125267617,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,1.02823661348756,0,0.407302655690628,0.387904974335251,0.140271639780637,0.442655759869801,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.655453258862952,0.345369963731791,0.289298117163023,0,0,0,0,7.38532713943843,8.32202974804643,0,0,0.631016438832513,1.17131623288992,1.29254038639679,2.86762557543062,3.56477878531831,4.24614796183249,0.809621403349789,0.292255857911312,0.395287777946524,3.21321316421807,0.141940085208269,0.534196811001766,0.651547837414304,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.900305470156551,0.129358683782755,0.428674070063185,0.886701168211368,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0,9.27126510052548,0,0,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0.627264888043406,0.87345025498471,0.269728692769641,0.495920734352016,0,0.129614973291793,0,0,1.19613236835183,0.496375471371293,0.583353565032143,0.516639293910924,0.337912250981556,0.704143431874524,0.651021924219751,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,20.3310663342144,19.3336599333014,24.0616115644547,18.9038500578056,11.6464028361009,19.6402413321322,13.5004500046361,10.8077088773813,18.1256963593682,8.28416498802912,0,0,0.682934423016537,0.243106717068294,0.209613162627982,0.735374033800057,1.77797382241292,0.618105171716683,1.28367683836726,1.26348605881899,2.02783439912192,1.32038438970253,2.06011316433741,1.40855335290712,1.09127391015665,1.42888107384922,1.85414921511769,1.15745532278223,0,0.588795680537589,1.37147700954166,1.06485483695602,0.715308569841963,1.59881058295561,1.31753132581463,1.69229215783353,1.82927972872773,0.789209134313529,1.49384525230448,2.24456908663095,0.830445126869219,1.0835493061312,0.818462086339379,1.39443157067369,0.192906610981141,1.24905288968973,1.16965804222704,0.859484216193193,0.765153328275374,0.220591419119515,0.695603506861264 | |||
|short_description=p2@Cntn6 | |||
}} |
Revision as of 20:55, 4 August 2015
Short description: | p2@Cntn6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cntn6_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000161413_5end |
EntrezGene: | 53870 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.28e-11 | 33 |
neuronal stem cell | 5.28e-11 | 33 |
neuroblast | 5.28e-11 | 33 |
electrically signaling cell | 5.28e-11 | 33 |
CNS neuron (sensu Vertebrata) | 3.90e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.90e-10 | 23 |
electrically responsive cell | 2.11e-08 | 39 |
electrically active cell | 2.11e-08 | 39 |
neural cell | 4.23e-07 | 43 |
ectodermal cell | 8.14e-07 | 44 |
neurectodermal cell | 8.14e-07 | 44 |